• United States

Research Output

2019

Load-dependent detachment kinetics plays a key role in bidirectional cargo transport by kinesin and dynein

Ohashi, K. G., Han, L., Mentley, B., Wang, J., Fricks, J. & Hancock, W. O., Apr 2019, In : Traffic. 20, 4, p. 284-294 11 p.

Research output: Contribution to journalArticle

1 Scopus citations

Local delivery of epigenetically stimulating folic acid for peripheral nerve regeneration

Yang, J. & Kim, G., Jan 1 2019, Society for Biomaterials Annual Meeting and Exposition 2019: The Pinnacle of Biomaterials Innovation and Excellence - Transactions of the 42nd Annual Meeting. Society for Biomaterials, 1 p. (Transactions of the Annual Meeting of the Society for Biomaterials and the Annual International Biomaterials Symposium; vol. 40).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Mechanical shear controls bacterial penetration in mucus

Figueroa-Morales, N., Dominguez-Rubio, L., Ott, T. L. & Aranson, I. S., Dec 1 2019, In : Scientific reports. 9, 1, 9713.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Mechanobiology of the abluminal glycocalyx

Butler, P. J. & Bhatnagar, A., Jan 1 2019, In : Biorheology. 56, 2-3, p. 101-112 12 p.

Research output: Contribution to journalArticle

1 Scopus citations

Microtubule binding kinetics of membrane-bound kinesin-1 predicts high motor copy numbers on intracellular cargo

Jiang, R., Vandal, S., Park, S., Majd, S., Tüzel, E. & Hancock, W. O., Dec 26 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 52, p. 26564-26570 7 p.

Research output: Contribution to journalArticle

Motility of Enzyme-Powered Vesicles

Ghosh, S., Mohajerani, F., Son, S., Velegol, D., Butler, P. J. & Sen, A., Sep 11 2019, In : Nano letters. 19, 9, p. 6019-6026 8 p.

Research output: Contribution to journalArticle

3 Scopus citations

Motor Dynamics Underlying Cargo Transport by Pairs of Kinesin-1 and Kinesin-3 Motors

Arpağ, G., Norris, S. R., Mousavi, S. I., Soppina, V., Verhey, K. J., Hancock, W. O. & Tüzel, E., Mar 19 2019, In : Biophysical journal. 116, 6, p. 1115-1126 12 p.

Research output: Contribution to journalArticle

6 Scopus citations
1 Scopus citations

Nanoparticle eluting-angioplasty balloons to treat cardiovascular diseases

Iyer, R., Kuriakose, A. E., Yaman, S., Su, L. C., Shan, D., Yang, J., Liao, J., Tang, L., Banerjee, S., Xu, H. & Nguyen, K. T., Jan 10 2019, In : International Journal of Pharmaceutics. 554, p. 212-223 12 p.

Research output: Contribution to journalArticle

3 Scopus citations

Nanotube assisted microwave electroporation for single cell pathogen identification and antimicrobial susceptibility testing

Gao, J., Li, H., Torab, P., Mach, K. E., Craft, D. W., Thomas, N. J., Puleo, C. M., Liao, J. C., Wang, T. H. & Wong, P. K., Apr 2019, In : Nanomedicine: Nanotechnology, Biology, and Medicine. 17, p. 246-253 8 p.

Research output: Contribution to journalArticle

5 Scopus citations

New textured polyphosphazene biomaterials with improved biocompatibility

Xu, L., Chen, C., Allcock, H. R. & Siedlecki, C., Jan 1 2019, Society for Biomaterials Annual Meeting and Exposition 2019: The Pinnacle of Biomaterials Innovation and Excellence - Transactions of the 42nd Annual Meeting. Society for Biomaterials, 1 p. (Transactions of the Annual Meeting of the Society for Biomaterials and the Annual International Biomaterials Symposium; vol. 40).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nonuniform Crowding Enhances Transport

Collins, M., Mohajerani, F., Ghosh, S., Guha, R., Lee, T. H., Butler, P. J., Sen, A. & Velegol, D., Aug 27 2019, In : ACS nano. 13, 8, p. 8946-8956 11 p.

Research output: Contribution to journalArticle

2 Scopus citations

Novel deep learning architecture for optical fluence dependent photoacoustic target localization

Johnstonbaugh, K., Agrawal, S., Abhishek, D., Homewood, M., Krisna Karri, S. P. & Kothapalli, S. R., Jan 1 2019, Photons Plus Ultrasound: Imaging and Sensing 2019. Wang, L. V. & Oraevsky, A. A. (eds.). SPIE, 108781L. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10878).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Optical-resolution photoacoustic microscopy using transparent ultrasound transducer

Chen, H., Agrawal, S., Dangi, A., Wible, C., Osman, M., Abune, L., Jia, H., Rossi, R., Wang, Y. & Kothapalli, S. R., Dec 2 2019, In : Sensors (Switzerland). 19, 24, 5470.

Research output: Contribution to journalArticle

Open Access
5 Scopus citations

Optimal design of combined ultrasound and multispectral photoacoustic deep tissue imaging devices using hybrid simulation platform

Agrawal, S., Dangi, A., Frings, N., Albahrani, H., Bin Ghouth, S. & Kothapalli, S. R., Jan 1 2019, Photons Plus Ultrasound: Imaging and Sensing 2019. Wang, L. V. & Oraevsky, A. A. (eds.). SPIE, 108782L. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10878).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

6 Scopus citations

Osteocyte TSC1 promotes sclerostin secretion to restrain osteogenesis in mice

Liu, W., Wang, Z., Yang, J., Wang, Y., Li, K., Huang, B., Yan, B., Wang, T., Li, M., Zou, Z., Yang, J., Xiao, G., Cui, Z. K., Liu, A. & Bai, X., May 1 2019, In : Open biology. 9, 5, 180262.

Research output: Contribution to journalArticle

Open Access

Outcomes of the Fourteenth International Conference on Pediatric Mechanical Circulatory Support Systems and Pediatric Cardiopulmonary Perfusion

Mongé, M. C., Backer, C. L., Myers, J. L. & Ündar, A., Jan 2019, In : Artificial organs. 43, 1, p. 5-8 4 p.

Research output: Contribution to journalEditorial

3 Scopus citations

Pharmacokinetics of panasenoside in rats and tissue distribution in mice by ultra-performance liquid chromatography tandem mass spectrometry

Chen, R., Lu, M., Tu, X., Sun, W., Ye, W., Ma, J., Wen, C., Wang, X. & Geng, P., Jun 2019, In : Acta Chromatographica. 31, 2, p. 146-150 5 p.

Research output: Contribution to journalArticle

Open Access
4 Scopus citations

Probing Collective Mechanoadaptation in Cardiomyocyte Development by Plasma Lithography Patterned Elastomeric Substrates

Jamilpour, N., Nam, K. H., Gregorio, C. C. & Wong, P. K., Aug 12 2019, In : ACS Biomaterials Science and Engineering. 5, 8, p. 3808-3816 9 p.

Research output: Contribution to journalArticle

2 Scopus citations

Programmed Degradation of Hydrogels with a Double-Locked Domain

Lai, J., Abune, L., Zhao, N. & Wang, Y., Feb 25 2019, In : Angewandte Chemie - International Edition. 58, 9, p. 2820-2825 6 p.

Research output: Contribution to journalArticle

1 Scopus citations

Progressive brain structural changes after the first year of treatment in first-episode treatment-naive patients with deficit or nondeficit schizophrenia

Lei, W., Kirkpatrick, B., Wang, Q., Deng, W., Li, M., Guo, W., Liang, S., Li, Y., Zhang, C., Li, X., Zhang, P., Li, Z., Xiang, B., Chen, J., Hu, X., Zhang, N. & Li, T., Jun 30 2019, In : Psychiatry Research - Neuroimaging. 288, p. 12-20 9 p.

Research output: Contribution to journalArticle

Propagations of spontaneous brain activity in awake rats

Liu, Y. & Zhang, N., Nov 15 2019, In : NeuroImage. 202, 116176.

Research output: Contribution to journalArticle

1 Scopus citations

Pulsatile flow is not a magic bullet for congenital heart surgery patients during CPB procedures

Ündar, A. & Moroi, M. K., Oct 1 2019, In : Artificial organs. 43, 10, p. 943-946 4 p.

Research output: Contribution to journalEditorial

Quantifying hydrodynamic collective states of magnetic colloidal spinners and rollers

Wang, Y., Canic, S., Kokot, G., Snezhko, A. & Aranson, I. S., Jan 2019, In : Physical Review Fluids. 4, 1, 013701.

Research output: Contribution to journalArticle

1 Scopus citations

Rapid Single-Cell Microbiological Analysis: Toward Precision Management of Infections and Dysbiosis

Li, H., Morowitz, M., Thomas, N. & Wong, P. K., Dec 1 2019, In : SLAS Technology. 24, 6, p. 603-605 3 p.

Research output: Contribution to journalArticle

Ring PMUT array based miniaturized photoacoustic endoscopy device

Dangi, A., Agrawal, S., Tiwari, S., Jadhav, S., Cheng, C., Datta, G. R., Trolier-Mckinstry, S., Pratap, R. & Kothapalli, S. R., Jan 1 2019, Photons Plus Ultrasound: Imaging and Sensing 2019. Oraevsky, A. A. & Wang, L. V. (eds.). SPIE, 1087811. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10878).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

5 Scopus citations

Sex-dependent VEGF expression underlies variations in human pluripotent stem cell to endothelial progenitor differentiation

Randolph, L. N., Bao, X., Oddo, M. & Lian, X. L., Dec 1 2019, In : Scientific reports. 9, 1, 16696.

Research output: Contribution to journalArticle

Open Access

Shape-programmed 3D printed swimming microtori for the transport of passive and active agents

Baker, R. D., Montenegro-Johnson, T., Sediako, A. D., Thomson, M. J., Sen, A., Lauga, E. & Aranson, I. S., Dec 1 2019, In : Nature communications. 10, 1, 4932.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Simultaneous transrectal ultrasound and photoacoustic human prostate imaging

Kothapalli, S. R., Sonn, G. A., Choe, J. W., Nikoozadeh, A., Bhuyan, A., Park, K. K., Cristman, P., Fan, R., Moini, A., Lee, B. C., Wu, J., Carver, T. E., Trivedi, D., Shiiba, L., Steinberg, I., Huland, D. M., Rasmussen, M. F., Liao, J. C., Brooks, J. D., Khuri-Yakub, P. T. & 1 others, Gambhir, S. S., Aug 28 2019, In : Science Translational Medicine. 11, 507, aav2169.

Research output: Contribution to journalArticle

8 Scopus citations

Single simulation platform for both optical and radio frequency induced thermoacoustic tomography

Fadden, C., Srinivasan, V. & Kothapalli, S. R., Jan 1 2019, Photons Plus Ultrasound: Imaging and Sensing 2019. Oraevsky, A. A. & Wang, L. V. (eds.). SPIE, 108785O. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10878).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Stress and Exposure Time on von Willebrand Factor Degradation

Jhun, C. S., Siedlecki, C., Xu, L., Lukic, B., Newswanger, R., Yeager, E., Reibson, J., Cysyk, J., Weiss, W. & Rosenberg, G., Feb 1 2019, In : Artificial organs. 43, 2, p. 199-206 8 p.

Research output: Contribution to journalArticle

2 Scopus citations

The blood compatibility challenge. Part 3: Material associated activation of blood cascades and cells

Gorbet, M., Sperling, C., Maitz, M. F., Siedlecki, C. A., Werner, C. & Sefton, M. V., Aug 2019, In : Acta Biomaterialia. 94, p. 25-32 8 p.

Research output: Contribution to journalReview article

The Orphan Kinesin PAKRP2 Achieves Processive Motility via a Noncanonical Stepping Mechanism

Gicking, A. M., Wang, P., Liu, C., Mickolajczyk, K. J., Guo, L., Hancock, W. O. & Qiu, W., Apr 2 2019, In : Biophysical journal. 116, 7, p. 1270-1281 12 p.

Research output: Contribution to journalArticle

1 Scopus citations

Thermal performance and surface analysis of steel-supported platinum nanoparticles designed for bio-oil catalytic upconversion during radio frequency-based inductive heating

Bursavich, J., Abu-Laban, M., Muley, P. D., Boldor, D. & Hayes, D. J., Mar 1 2019, In : Energy Conversion and Management. 183, p. 689-697 9 p.

Research output: Contribution to journalArticle

3 Scopus citations

Thin Film PZT-Based PMUT Arrays for Deterministic Particle Manipulation

Cheng, C. Y., Dangi, A., Ren, L., Tiwari, S., Benoit, R. R., Qiu, Y., Lay, H. S., Agrawal, S., Pratap, R., Kothapalli, S. R., Mallouk, T. E., Cochran, S. & Trolier-Mckinstry, S., Oct 2019, In : IEEE transactions on ultrasonics, ferroelectrics, and frequency control. 66, 10, p. 1605-1615 11 p., 8753665.

Research output: Contribution to journalArticle

Three Beads Are Better Than One

Howard, J. & Hancock, W. O., Jan 1 2019, (Accepted/In press) In : Biophysical journal.

Research output: Contribution to journalArticle

Topological defects in active liquid crystals

Aranson, I. S., Jan 1 2019, In : Physics-Uspekhi. 62, 9, p. 892-909 18 p.

Research output: Contribution to journalReview article

Transcriptomic Profiling of Adipose Derived Stem Cells Undergoing Osteogenesis by RNA-Seq

Shaik, S., Martin, E. C., Hayes, D. J., Gimble, J. M. & Devireddy, R. V., Dec 1 2019, In : Scientific reports. 9, 1, 11800.

Research output: Contribution to journalArticle

Open Access

Understanding Dense Active Nematics from Microscopic Models

Patelli, A., Djafer-Cherif, I., Aranson, I. S., Bertin, E. & Chaté, H., Dec 18 2019, In : Physical Review Letters. 123, 25, 258001.

Research output: Contribution to journalArticle

1 Scopus citations

Welcome to the Fifteenth International conference on Pediatric Mechanical Circulatory Support Systems and Pediatric Cardiopulmonary Perfusion

Law, S., Chai, P. & Ündar, A., Apr 2019, In : Artificial organs. 43, 4, p. 329-333 5 p.

Research output: Contribution to journalEditorial

1 Scopus citations

Yarn Reinforced Gelatin Hydrogel As A New Scaffold For Tissue Engineering

Rahimtoroghi, E., Kasra, M. & Hayes, D., Nov 2019, 2019 26th National and 4th International Iranian Conference on Biomedical Engineering, ICBME 2019. Institute of Electrical and Electronics Engineers Inc., p. 66-69 4 p. 9030398. (2019 26th National and 4th International Iranian Conference on Biomedical Engineering, ICBME 2019).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

β-Methylamino-L-alanine substitution of serine in SOD1 suggests a direct role in ALS etiology

Proctor, E. A., Mowrey, D. D. & Dokholyan, N. V., Jul 2019, In : PLoS computational biology. 15, 7, e1007225.

Research output: Contribution to journalArticle

Open Access
2020

A Deep Learning approach to Photoacoustic Wavefront Localization in Deep-Tissue Medium

Johnstonbaugh, K., Agrawal, S., Durairaj, D. A., Fadden, C., Dangi, A., Karri, S. P. K. & Kothapalli, S. R., Jan 1 2020, (Accepted/In press) In : IEEE transactions on ultrasonics, ferroelectrics, and frequency control.

Research output: Contribution to journalArticle

6 Scopus citations

Alternating magnetic field mediated release of fluorophores from magnetic nanoparticles by hysteretic heating

Casey, J. S., Arrizabalaga, J. H., Abu-Laban, M., Becca, J. C., Rose, B. J., Strickland, K. T., Bursavich, J. B., McCann, J. S., Pacheco, C. N., Jessen, L., Attaluri, A. & Hayes, D. J., Jul 1 2020, In : Journal of Colloid And Interface Science. 571, p. 348-355 8 p.

Research output: Contribution to journalArticle

A modular approach to neonatal whole-brain photoacoustic imaging

Dangi, A., Roy, K., Agrawal, S., Chen, H., Ashok, A., Wible, C., Osman, M., Pratap, R. & Kothapalli, S. R., Jan 1 2020, Photons Plus Ultrasound: Imaging and Sensing 2020. Oraevsky, A. A. & Wang, L. V. (eds.). SPIE, 1124057. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11240).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Antibacterial effects of low-temperature plasma generated by atmospheric-pressure plasma jet are mediated by reactive oxygen species

Nicol, M. K. J., Brubaker, T. R., Honish, B. J., Simmons, A. N., Kazemi, A., Geissel, M. A., Whalen, C. T., Siedlecki, C. A., Bilén, S. G., Knecht, S. D. & Kirimanjeswara, G. S., Dec 1 2020, In : Scientific reports. 10, 1, 3066.

Research output: Contribution to journalArticle

Open Access

A Photoacoustic Imaging Device Using Piezoelectric Micromachined Ultrasound Transducers (PMUTs)

Dangi, A., Cheng, C. Y., Agrawal, S., Tiwari, S., Datta, G. R., Benoit, R. R., Pratap, R., Trolier-Mckinstry, S. & Kothapalli, S. R., Apr 2020, In : IEEE transactions on ultrasonics, ferroelectrics, and frequency control. 67, 4, p. 801-809 9 p., 8915732.

Research output: Contribution to journalArticle

Automatic Brain Extraction for Rodent MRI Images

Liu, Y., Unsal, H. S., Tao, Y. & Zhang, N., Jan 1 2020, (Accepted/In press) In : Neuroinformatics.

Research output: Contribution to journalArticle