• United States

Research Output

Correlation between cerebral-renal near-infrared spectroscopy and ipsilateral renal perfusion parameters as clinical outcome predictors after open heart surgery in neonates and infants

Örmeci, T., Alkan-Bozkaya, T., Özyüksel, A., Ersoy, C., Ündar, A., Akçevin, A. & Türkoğlu, H., Jan 1 2015, In : Artificial organs. 39, 1, p. 53-58 6 p.

Research output: Contribution to journalArticle

9 Scopus citations

Correlating leaflet design and closing dynamics with turbulent flows near bileaflet mechanical heart valves

Herbertson, L. H., Deutsch, S. & Manning, K. B., Dec 1 2009, Proceedings of the ASME Summer Bioengineering Conference, SBC2008. PART B ed. p. 1091-1092 2 p. (Proceedings of the ASME Summer Bioengineering Conference, SBC2008; no. PART B).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Correction: Oncogenic KRAS confers chemoresistance by upregulating Nrf2 (Cancer Research (2014) 74 (7430-7441) DOI: 10.1158/0008-5472.CAN-14-1439)

Tao, S., Wang, S., Moghaddam, S. J., Ooi, A., Chapman, E., Wong, P. K. & Zhang, D. D., Mar 1 2019, In : Cancer Research. 79, 5, 1 p.

Research output: Contribution to journalComment/debate

Open Access

Correction: Thermal unfolding pathway of PHD2 catalytic domain in three different PHD2 species: Computational approaches (PLoS ONE)

Hadi-Alijanvand, H., Proctor, E. A., Goliaei, B., Dokholyan, N. & Moosavi-Movahedi, A. A., Apr 22 2013, In : PloS one. 8, 4

Research output: Contribution to journalComment/debate

Correcting errors in the BRCA1 warning system

Liang, Y., Dearnaley, W. J., Alden, N. A., Solares, M. J., Gilmore, B. L., Pridham, K. J., Varano, C., Sheng, Z., Alli, E. & Kelly, D., Jan 2019, In : DNA Repair. 73, p. 120-128 9 p.

Research output: Contribution to journalArticle

Core instability and spatiotemporal intermittency of spiral waves in oscillatory media

Aranson, I., Kramer, L. & Weber, A., Jan 1 1994, In : Physical review letters. 72, 15, p. 2316-2319 4 p.

Research output: Contribution to journalArticle

56 Scopus citations

Co-regularized deep multi-network embedding

Ni, J., Chang, S., Liu, X., Cheng, W., Chen, H., Xu, D. & Zhang, X., Apr 10 2018, The Web Conference 2018 - Proceedings of the World Wide Web Conference, WWW 2018. Association for Computing Machinery, Inc, p. 469-478 10 p. (The Web Conference 2018 - Proceedings of the World Wide Web Conference, WWW 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access

Coordinated mechanosensitivity of membrane rafts and focal adhesions

Fuentes, D. E. & Butler, P. J., Jun 1 2012, In : Cellular and Molecular Bioengineering. 5, 2, p. 143-154 12 p.

Research output: Contribution to journalArticle

10 Scopus citations

Controversy over the benefits of pulsatile perfusion (multiple letters) [1]

Ündar, A., Herreros, J., Berjano, E. J., Más, P., Padrós, C., Sales-Nebot, L., Vlaanderen, W., Díaz, P., Páramo, J. A., Rábago, G. & Mercé, S., Jun 2004, In : International Journal of Artificial Organs. 27, 6, p. 509-512 4 p.

Research output: Contribution to journalLetter

3 Scopus citations

Controlling spatiotemporal chaos

Aronson, I., Levine, H. & Tsimring, L., Jan 1 1994, In : Physical Review Letters. 72, 16, p. 2561-2564 4 p.

Research output: Contribution to journalArticle

149 Scopus citations

Controlled release of ethacrynic acid from poly(lactide-co-glycolide) films for glaucoma treatment

Wang, Y., Challa, P., Epstein, D. L. & Yuan, F., Aug 1 2004, In : Biomaterials. 25, 18, p. 4279-4285 7 p.

Research output: Contribution to journalArticle

44 Scopus citations

Controlled dynamics of interfaces in a vibrated granular layer

Aranson, I. S., Blair, D., Kwok, W. K., Karapetrov, G., Welp, U., Crabtree, G. W., Vinokur, V. M. & Tsimring, L. S., 1999, In : Physical review letters. 82, 4, p. 731-734 4 p.

Research output: Contribution to journalArticle

25 Scopus citations

Contributions of contact activation pathways of coagulation factor XII in plasma

Chatterjee, K., Guo, Z., Vogler, E. A. & Siedlecki, C. A., Jul 1 2009, In : Journal of Biomedical Materials Research - Part A. 90, 1, p. 27-34 8 p.

Research output: Contribution to journalArticle

25 Scopus citations
114 Scopus citations

Continuum theory of axial segregation in a long rotating drum

Aranson, I. S., Tsimring, L. S. & Vinokur, V. M., 1999, In : Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 60, 2, p. 1975-1987 13 p.

Research output: Contribution to journalArticle

45 Scopus citations

Continuum modeling of myxobacteria clustering

Harvey, C. W., Alber, M., Tsimring, L. S. & Aranson, I. S., Mar 1 2013, In : New Journal of Physics. 15, 035029.

Research output: Contribution to journalArticle

16 Scopus citations

Continuum Modeling of Granular Flow and Structure Formation

Aranson, I. S. & Tsimring, L. S., Jun 6 2005, The Physics of Granular Media. wiley, p. 141-164 24 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Continuum field description of crack propagation

Aranson, I. S., Kalatsky, V. A. & Vinokur, V. M., Jul 3 2000, In : Physical Review Letters. 85, 1, p. 118-121 4 p.

Research output: Contribution to journalArticle

168 Scopus citations

Continuum description of avalanches in granular media

Aranson, I. S. & Tsimring, L. S., Aug 1 2001, In : Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 64, 2 I, p. 203011-203014 4 p.

Research output: Contribution to journalArticle

95 Scopus citations
3 Scopus citations

Continuous particle cross over in microfluidic channels for continuous biosensing

Yang, S., Undar, A. & Zahn, J. D., Jan 1 2006, Proceedings of 2006 ASME International Mechanical Engineering Congress and Exposition, IMECE2006 - Fluids Engineering Division. American Society of Mechanical Engineers (ASME), (American Society of Mechanical Engineers, Fluids Engineering Division (Publication) FED).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Continuous Monitoring of Inflammation Biomarkers During Simulated Cardiopulmonary Bypass Using a Microfluidic Immunoassay Device-A Pilot Study

Sasso, L. A., Aran, K., Guan, Y., Ündar, A. & Zahn, J. D., Jan 2013, In : Artificial organs. 37, 1, p. E9-E17

Research output: Contribution to journalArticle

13 Scopus citations

Continuous cytometric bead processing within a microfluidic device for bead based sensing platforms

Yang, S., Ündar, A. & Zahn, J. D., Jan 1 2007, In : Lab on a Chip. 7, 5, p. 588-595 8 p.

Research output: Contribution to journalArticle

29 Scopus citations

Continuous and Pulsatile Pediatric Ventricular Assist Device Hemodynamics with a Viscoelastic Blood Model

Good, B. C., Deutsch, S. & Manning, K. B., Mar 1 2016, In : Cardiovascular Engineering and Technology. 7, 1, p. 23-43 21 p.

Research output: Contribution to journalArticle

3 Scopus citations

Continuity and affine fiber kinematics in biaxial tension of the supraspinatus tendon

Szczesny, S., Peloquin, J., Ilkhani-Pour, S., Cortes Correales, D. H., Kadlowec, J. A., Soslowsky, L. J. & Elliott, D. M., Dec 1 2011, ASME 2011 Summer Bioengineering Conference, SBC 2011. PARTS A AND B ed. p. 659-660 2 p. (ASME 2011 Summer Bioengineering Conference, SBC 2011; no. PARTS A AND B).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Contact activation of blood-plasma coagulation

Vogler, E. A. & Siedlecki, C. A., Apr 1 2009, In : Biomaterials. 30, 10, p. 1857-1869 13 p.

Research output: Contribution to journalArticle

185 Scopus citations

Contact activation by the intrinsic pathway of blood plasma coagulation

Yan, Y., Xu, L. C., Vogler, E. A. & Siedlecki, C. A., Jan 1 2018, Hemocompatibility of Biomaterials for Clinical Applications: Blood-Biomaterials Interactions. Elsevier Inc., p. 3-28 26 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Construction of versatile multilayered composite nanoparticles from a customized nanogel template

Zhang, J., Jia, J., Kim, J. P., Yang, F., Wang, X., Shen, H., Xu, S., Yang, J. & Wu, D., Mar 2018, In : Bioactive Materials. 3, 1, p. 87-96 10 p.

Research output: Contribution to journalArticle

4 Scopus citations

Construction of graphene-based enzyme system for rapid photo-assisted proteolysis

Cheng, G., Hao, S. J. & Zheng, S. Y., Aug 5 2015, 2015 Transducers - 2015 18th International Conference on Solid-State Sensors, Actuators and Microsystems, TRANSDUCERS 2015. Institute of Electrical and Electronics Engineers Inc., p. 1374-1377 4 p. 7181188. (2015 Transducers - 2015 18th International Conference on Solid-State Sensors, Actuators and Microsystems, TRANSDUCERS 2015).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Construction of a high-performance magnetic enzyme nanosystem for rapid tryptic digestion

Cheng, G. & Zheng, S. Y., Nov 6 2014, In : Scientific reports. 4, 6947.

Research output: Contribution to journalArticle

42 Scopus citations

Construction and validation of nano gold tripods for molecular imaging of living subjects

Cheng, K., Kothapalli, S. R., Liu, H., Koh, A. L., Jokerst, J. V., Jiang, H., Yang, M., Li, J., Levi, J., Wu, J. C., Gambhir, S. S. & Cheng, Z., Mar 5 2014, In : Journal of the American Chemical Society. 136, 9, p. 3560-3571 12 p.

Research output: Contribution to journalArticle

113 Scopus citations

Constrained hierarchical modeling of degradation data in tissue-engineered scaffold fabrication

Zeng, L., Deng, X. & Yang, J., Jan 2 2016, In : IIE Transactions (Institute of Industrial Engineers). 48, 1, p. 16-33 18 p.

Research output: Contribution to journalArticle

10 Scopus citations

Constrained Gaussian process with application in tissue-engineering scaffold biodegradation

Zeng, L., Deng, X. & Yang, J., May 4 2018, In : IISE Transactions. 50, 5, p. 431-447 17 p.

Research output: Contribution to journalArticle

1 Scopus citations

Conformational variability of the intracellular domain of Drosophila Notch and its interaction with Suppressor of Hairless

Kelly, D. F., Lake, R. J., Walz, T. & Artavanis-Tsakonas, S., Jun 5 2007, In : Proceedings of the National Academy of Sciences of the United States of America. 104, 23, p. 9591-9596 6 p.

Research output: Contribution to journalArticle

Open Access
9 Scopus citations

Confinement and substrate topography control cell migration in a 3D computational model

Winkler, B., Aranson, I. S. & Ziebert, F., Dec 1 2019, In : Communications Physics. 2, 1, 82.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Concentration dependence of the collective dynamics of swimming bacteria

Sokolov, A., Aranson, I. S., Kessler, J. O. & Goldstein, R. E., Apr 11 2007, In : Physical Review Letters. 98, 15, 158102.

Research output: Contribution to journalArticle

392 Scopus citations

Computer assisted photoacoustic imaging guided device for safer percutaneous needle operations

Zhang, J., Agrawal, S., Dangi, A., Frings, N. & Kothapalli, S. R., Jan 1 2019, Photons Plus Ultrasound: Imaging and Sensing 2019. Oraevsky, A. A. & Wang, L. V. (eds.). SPIE, 1087866. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10878).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Computational translation of genomic responses from experimental model systems to humans

Brubaker, D. K., Proctor, E. A., Haigis, K. M. & Lauffenburger, D. A., 2019, In : PLoS computational biology. 15, 1, e1006286.

Research output: Contribution to journalArticle

4 Scopus citations
5 Scopus citations

Computational modeling of the Food and Drug Administration’s benchmark centrifugal blood pump

Good, B. C. & Manning, K. B., Jul 1 2020, In : Artificial organs. 44, 7, p. E263-E276

Research output: Contribution to journalArticle

Computational Modeling of Neonatal Cardiopulmonary Bypass Hemodynamics With Full Circle of Willis Anatomy

Piskin, S., Ündar, A. & Pekkan, K., Oct 2015, In : Artificial organs. 39, 10, p. E164-E175

Research output: Contribution to journalArticle

7 Scopus citations

Computational fluid dynamics design and analysis of a passively suspended tesla pump left ventricular assist device

Medvitz, R. B., Boger, D. A., Izraelev, V., Rosenberg, G. & Paterson, E. G., May 1 2011, In : Artificial organs. 35, 5, p. 522-533 12 p.

Research output: Contribution to journalArticle

18 Scopus citations

Computational approaches to understanding protein aggregation in neurodegeneration

Redler, R. L., Shirvanyants, D., Dagliyan, O., Ding, F., Kim, D. N., Kota, P., Proctor, E. A., Ramachandran, S., Tandon, A. & Dokholyan, N. V., Apr 2014, In : Journal of Molecular Cell Biology. 6, 2, p. 104-115 12 p.

Research output: Contribution to journalReview article

20 Scopus citations

Computational approaches to substrate-based cell motility

Ziebert, F. & Aranson, I. S., Jul 15 2016, In : npj Computational Materials. 2, 16019.

Research output: Contribution to journalReview article

24 Scopus citations

Composite scaffolds: Bridging nanofiber and microsphere architectures to improve bioactivity of mechanically competent constructs

Brown, J. L., Peach, M. S., Nair, L. S., Kumbar, S. G. & Laurencin, C. T., Dec 15 2010, In : Journal of Biomedical Materials Research - Part A. 95, 4, p. 1150-1158 9 p.

Research output: Contribution to journalArticle

34 Scopus citations

Composite microsphere nanofiber scaffolds for bone tissue engineering

Brown, J. L., Nair, L. & Laurencin, C., Dec 1 2008, 8th World Biomaterials Congress 2008. 1 p. (8th World Biomaterials Congress 2008; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Complex bacterial patterns

Ben-Jacob, E., Cohen, I., Shochet, O., Aranson, I., Levine, H. & Tsimring, L., Feb 16 1995, In : Nature. 373, 6515, p. 566-567 2 p.

Research output: Contribution to journalArticle

97 Scopus citations

Completely implantable total artificial heart system

Snyder, A., Rosenberg, G., Weiss, W., Pierce, W., Pae, W., Marlotte, J., Nazarian, R. & Ford, S., Jul 1 1991, In : ASAIO Transactions. 37, 3, p. M237-M238

Research output: Contribution to journalConference article

3 Scopus citations

Competitive-protein adsorption in contact activation of blood factor XII

Zhuo, R., Siedlecki, C. & Vogler, E. A., Oct 1 2007, In : Biomaterials. 28, 30, p. 4355-4369 15 p.

Research output: Contribution to journalArticle

51 Scopus citations