• United States

Research Output 1974 2020

Article
96 Citations (Scopus)

Complex bacterial patterns

Ben-Jacob, E., Cohen, I., Shochet, O., Aranson, I., Levine, H. & Tsimring, L., Feb 16 1995, In : Nature. 373, 6515, p. 566-567 2 p.

Research output: Contribution to journalArticle

Bacterial Physiological Phenomena
Biological Models
Chemotaxis
32 Citations (Scopus)

Composite scaffolds: Bridging nanofiber and microsphere architectures to improve bioactivity of mechanically competent constructs

Brown, J. L., Peach, M. S., Nair, L. S., Kumbar, S. G. & Laurencin, C. T., Dec 15 2010, In : Journal of Biomedical Materials Research - Part A. 95, 4, p. 1150-1158 9 p.

Research output: Contribution to journalArticle

Nanofibers
Bioactivity
Microspheres
Scaffolds
Composite materials
17 Citations (Scopus)

Computational fluid dynamics design and analysis of a passively suspended tesla pump left ventricular assist device

Medvitz, R. B., Boger, D. A., Izraelev, V., Rosenberg, G. & Paterson, E. G., May 1 2011, In : Artificial organs. 35, 5, p. 522-533 12 p.

Research output: Contribution to journalArticle

Left ventricular assist devices
Heart-Assist Devices
Hydrodynamics
Computational fluid dynamics
Pumps
6 Citations (Scopus)

Computational Modeling of Neonatal Cardiopulmonary Bypass Hemodynamics With Full Circle of Willis Anatomy

Piskin, S., Ündar, A. & Pekkan, K., Oct 2015, In : Artificial organs. 39, 10, p. E164-E175

Research output: Contribution to journalArticle

Circle of Willis
Hemodynamics
Arches
Cardiopulmonary Bypass
Anatomy
5 Citations (Scopus)
Vena Cava Filters
Inferior Vena Cava
Embolism
Trapping
Filter
2 Citations (Scopus)

Computational translation of genomic responses from experimental model systems to humans

Brubaker, D. K., Proctor, E. A., Haigis, K. M. & Lauffenburger, D. A., Jan 1 2019, In : PLoS computational biology. 15, 1, e1006286.

Research output: Contribution to journalArticle

translation (genetics)
Genomics
Mouse
genomics
Theoretical Models
373 Citations (Scopus)

Concentration dependence of the collective dynamics of swimming bacteria

Sokolov, A., Aranson, I. S., Kessler, J. O. & Goldstein, R. E., Apr 11 2007, In : Physical Review Letters. 98, 15, 158102.

Research output: Contribution to journalArticle

bacteria
locomotives
viscous fluids
microorganisms
thin films

Confinement and substrate topography control cell migration in a 3D computational model

Winkler, B., Aranson, I. S. & Ziebert, F., Dec 1 2019, In : Communications Physics. 2, 1, 82.

Research output: Contribution to journalArticle

Open Access
topography
cells
locomotion
pathology
metastasis
9 Citations (Scopus)

Conformational variability of the intracellular domain of Drosophila Notch and its interaction with Suppressor of Hairless

Kelly, D., Lake, R. J., Walz, T. & Artavanis-Tsakonas, S., Jun 5 2007, In : Proceedings of the National Academy of Sciences of the United States of America. 104, 23, p. 9591-9596 6 p.

Research output: Contribution to journalArticle

Open Access
Notch Receptors
Intracellular Membranes
Divalent Cations
Drosophila
Signal Transduction

Constrained Gaussian process with application in tissue-engineering scaffold biodegradation

Zeng, L., Deng, X. & Yang, J., May 4 2018, In : IISE Transactions. 50, 5, p. 431-447 17 p.

Research output: Contribution to journalArticle

Scaffolds (biology)
Biodegradation
Tissue engineering
Scaffolds
Fabrication
7 Citations (Scopus)

Constrained hierarchical modeling of degradation data in tissue-engineered scaffold fabrication

Zeng, L., Deng, X. & Yang, J., Jan 2 2016, In : IIE Transactions (Institute of Industrial Engineers). 48, 1, p. 16-33 18 p.

Research output: Contribution to journalArticle

Fabrication
Degradation
Scaffolds
Tissue Scaffolds
Parameter estimation
105 Citations (Scopus)

Construction and validation of nano gold tripods for molecular imaging of living subjects

Cheng, K., Kothapalli, S. R., Liu, H., Koh, A. L., Jokerst, J. V., Jiang, H., Yang, M., Li, J., Levi, J., Wu, J. C., Gambhir, S. S. & Cheng, Z., Mar 5 2014, In : Journal of the American Chemical Society. 136, 9, p. 3560-3571 12 p.

Research output: Contribution to journalArticle

Molecular imaging
Molecular Imaging
Photoacoustic effect
Gold
Imaging techniques
38 Citations (Scopus)

Construction of a high-performance magnetic enzyme nanosystem for rapid tryptic digestion

Cheng, G. & Zheng, S. Y., Nov 6 2014, In : Scientific reports. 4, 6947.

Research output: Contribution to journalArticle

Digestion
Enzymes
Proteolysis
Dromaiidae
Proteins
3 Citations (Scopus)

Construction of versatile multilayered composite nanoparticles from a customized nanogel template

Zhang, J., Jia, J., Kim, J. P., Yang, F., Wang, X., Shen, H., Xu, S., Yang, J. & Wu, D., Mar 2018, In : Bioactive Materials. 3, 1, p. 87-96 10 p.

Research output: Contribution to journalArticle

Nanoparticles
Composite materials
Periosteum
Oncology
Orthopedics
177 Citations (Scopus)

Contact activation of blood-plasma coagulation

Vogler, E. A. & Siedlecki, C. A., Apr 1 2009, In : Biomaterials. 30, 10, p. 1857-1869 13 p.

Research output: Contribution to journalArticle

Blood Coagulation
Coagulation
Adsorption
Blood
Chemical activation
2 Citations (Scopus)

Continuous and Pulsatile Pediatric Ventricular Assist Device Hemodynamics with a Viscoelastic Blood Model

Good, B. C., Deutsch, S. & Manning, K. B., Mar 1 2016, In : Cardiovascular Engineering and Technology. 7, 1, p. 23-43 21 p.

Research output: Contribution to journalArticle

Pediatrics
Heart-Assist Devices
Hemodynamics
Blood
Shear stress
29 Citations (Scopus)

Continuous cytometric bead processing within a microfluidic device for bead based sensing platforms

Yang, S., Ündar, A. & Zahn, J. D., Jan 1 2007, In : Lab on a Chip. 7, 5, p. 588-595 8 p.

Research output: Contribution to journalArticle

Lab-On-A-Chip Devices
Microfluidics
Fluorescein
Processing
Streptavidin
13 Citations (Scopus)

Continuous Monitoring of Inflammation Biomarkers During Simulated Cardiopulmonary Bypass Using a Microfluidic Immunoassay Device-A Pilot Study

Sasso, L. A., Aran, K., Guan, Y., Ündar, A. & Zahn, J. D., Jan 1 2013, In : Artificial organs. 37, 1, p. E9-E17

Research output: Contribution to journalArticle

Lab-On-A-Chip Devices
Biomarkers
Cardiopulmonary Bypass
Immunoassay
Microfluidics
1 Citation (Scopus)
Granular Flow
Granular Media
Avalanche
avalanches
Continuum
94 Citations (Scopus)

Continuum description of avalanches in granular media

Aranson, I. S. & Tsimring, L. S., Aug 1 2001, In : Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 64, 2 I, p. 203011-203014 4 p.

Research output: Contribution to journalArticle

Granular Media
Avalanche
avalanches
Continuum
continuums
161 Citations (Scopus)

Continuum field description of crack propagation

Aranson, I. S., Kalatsky, V. A. & Vinokur, V. M., Jul 3 2000, In : Physical Review Letters. 85, 1, p. 118-121 4 p.

Research output: Contribution to journalArticle

crack propagation
continuums
elastic deformation
crack initiation
phenomenology
14 Citations (Scopus)

Continuum modeling of myxobacteria clustering

Harvey, C. W., Alber, M., Tsimring, L. S. & Aranson, I. S., Mar 1 2013, In : New Journal of Physics. 15, 035029.

Research output: Contribution to journalArticle

continuum modeling
gliding
bacteria
rods
hydrodynamics
45 Citations (Scopus)

Continuum theory of axial segregation in a long rotating drum

Aranson, I. S., Tsimring, L. S. & Vinokur, V. M., Jan 1 1999, In : Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 60, 2, p. 1975-1987 13 p.

Research output: Contribution to journalArticle

drums
Segregation
Rotating
Continuum
continuums
111 Citations (Scopus)
Granular Flow
Continuum
continuums
drums
avalanches
25 Citations (Scopus)

Contributions of contact activation pathways of coagulation factor XII in plasma

Chatterjee, K., Guo, Z., Vogler, E. A. & Siedlecki, C. A., Jul 1 2009, In : Journal of Biomedical Materials Research - Part A. 90, 1, p. 27-34 8 p.

Research output: Contribution to journalArticle

Factor XII
Coagulation
Chemical activation
Prekallikrein
Plasmas
25 Citations (Scopus)

Controlled dynamics of interfaces in a vibrated granular layer

Aranson, I. S., Blair, D., Kwok, W. K., Karapetrov, G., Welp, U., Crabtree, G. W., Vinokur, V. M. & Tsimring, L. S., Jan 1 1999, In : Physical Review Letters. 82, 4, p. 731-734 4 p.

Research output: Contribution to journalArticle

granular materials
harmonics
excitation
43 Citations (Scopus)

Controlled release of ethacrynic acid from poly(lactide-co-glycolide) films for glaucoma treatment

Wang, Y., Challa, P., Epstein, D. L. & Yuan, F., Aug 1 2004, In : Biomaterials. 25, 18, p. 4279-4285 7 p.

Research output: Contribution to journalArticle

Ethacrynic Acid
Polyglactin 910
Glaucoma
Acids
Therapeutics
148 Citations (Scopus)

Controlling spatiotemporal chaos

Aronson, I., Levine, H. & Tsimring, L., Jan 1 1994, In : Physical Review Letters. 72, 16, p. 2561-2564 4 p.

Research output: Contribution to journalArticle

chaos
Landau-Ginzburg equations
defects
stabilization
10 Citations (Scopus)

Coordinated mechanosensitivity of membrane rafts and focal adhesions

Fuentes, D. E. & Butler, P. J., Jun 1 2012, In : Cellular and Molecular Bioengineering. 5, 2, p. 143-154 12 p.

Research output: Contribution to journalArticle

Focal Adhesions
Adhesion
Membrane
Talin
Membranes
56 Citations (Scopus)

Core instability and spatiotemporal intermittency of spiral waves in oscillatory media

Aronson, I., Kramer, L. & Weber, A., Jan 1 1994, In : Physical Review Letters. 72, 15, p. 2316-2319 4 p.

Research output: Contribution to journalArticle

intermittency
Landau-Ginzburg equations

Correcting errors in the BRCA1 warning system

Liang, Y., Dearnaley, W. J., Alden, N. A., Solares, M. J., Gilmore, B. L., Pridham, K. J., Varano, C., Sheng, Z., Alli, E. & Kelly, D., Jan 1 2019, In : DNA Repair. 73, p. 120-128 9 p.

Research output: Contribution to journalArticle

BRCA1 Protein
Alarm systems
Repair
Biochemical Phenomena
Cells
8 Citations (Scopus)

Correlation between cerebral-renal near-infrared spectroscopy and ipsilateral renal perfusion parameters as clinical outcome predictors after open heart surgery in neonates and infants

Örmeci, T., Alkan-Bozkaya, T., Özyüksel, A., Ersoy, C., Ündar, A., Akçevin, A. & Türkoğlu, H., Jan 1 2015, In : Artificial organs. 39, 1, p. 53-58 6 p.

Research output: Contribution to journalArticle

Near infrared spectroscopy
Near-Infrared Spectroscopy
Surgery
Thoracic Surgery
Ultrasonography
49 Citations (Scopus)

Correlation of in vivo clot deposition with the flow characteristics in the 50 cc Penn State Artificial Heart: A preliminary study

Hochareon, P., Manning, K. B., Fontaine, A. A., Tarbell, J. M. & Deutsch, S., Nov 1 2004, In : ASAIO Journal. 50, 6, p. 537-542 6 p.

Research output: Contribution to journalArticle

Artificial heart
Artificial Heart
Rheology
Shear deformation
Thrombosis
25 Citations (Scopus)

Correlation properties of collective motion in bacterial suspensions

Ryan, S. D., Sokolov, A., Berlyand, L. & Aranson, I. S., Oct 1 2013, In : New Journal of Physics. 15, 105021.

Research output: Contribution to journalArticle

bacteria
emerging
hydrodynamics
dipoles
collisions
12 Citations (Scopus)

Cortical inhibition deficits in recent onset PTSD after a single prolonged trauma exposure

Qi, S., Mu, Y., Liu, K., Zhang, J., Huan, Y., Tan, Q., Shi, M., Wang, Q., Chen, Y., Wang, H., Wang, H., Zhang, N., Zhang, X., Xiong, L. & Yin, H., Oct 1 2013, In : NeuroImage: Clinical. 3, p. 226-233 8 p.

Research output: Contribution to journalArticle

Post-Traumatic Stress Disorders
Wounds and Injuries
Hippocampus
Gyrus Cinguli
Frontal Lobe
11 Citations (Scopus)

Coupled flow-structure-biochemistry simulations of dynamic systems of blood cells using an adaptive surface tracking method

Hoskins, M. H., Kunz, R. F., Bistline, J. E. & Dong, C., Jul 1 2009, In : Journal of Fluids and Structures. 25, 5, p. 936-953 18 p.

Research output: Contribution to journalArticle

Biochemistry
Flow structure
Dynamical systems
Blood
Cells

CREATION OF SELF-STRUCTURES HIERARCHY OF INSTABILITIES AND BIFURCATIONS.

Aronson, I., Gaponov-Grekhov, A. V. & Rabinovich, M. I., 1986, In : Bulletin of the Academy of Sciences of the U.S.S.R. Physical series. 51, 6, p. 87-96 10 p.

Research output: Contribution to journalArticle

hierarchies
Nucleation
nucleation
maintenance
9 Citations (Scopus)

Crimped Nanofibrous Biomaterials Mimic Microstructure and Mechanics of Native Tissue and Alter Strain Transfer to Cells

Szczesny, S. E., Driscoll, T. P., Tseng, H. Y., Liu, P. C., Heo, S. J., Mauck, R. L. & Chao, P. H. G., Nov 13 2017, In : ACS Biomaterials Science and Engineering. 3, 11, p. 2869-2876 8 p.

Research output: Contribution to journalArticle

Biocompatible Materials
Biomaterials
Mechanics
Tissue
Microstructure
14 Citations (Scopus)

Cross-Linking Chemistry of Tyramine-Modified Hyaluronan Hydrogels Alters Mesenchymal Stem Cell Early Attachment and Behavior

Loebel, C., Szczesny, S. E., Cosgrove, B. D., Alini, M., Zenobi-Wong, M., Mauck, R. L. & Eglin, D., Mar 13 2017, In : Biomacromolecules. 18, 3, p. 855-864 10 p.

Research output: Contribution to journalArticle

Tyramine
Hydrogels
Hyaluronic Acid
Stem cells
Hydrogel
2 Citations (Scopus)

Cross-population myelination covariance of human cerebral cortex

Ma, Z. & Zhang, N., Sep 1 2017, In : Human Brain Mapping. 38, 9, p. 4730-4743 14 p.

Research output: Contribution to journalArticle

Cerebral Cortex
Brain
Population
Myelin Sheath
Connectome

Cryo-EM-On-a-Chip: Custom-Designed Substrates for the 3D Analysis of Macromolecules

Alden, N. A., Varano, A. C., Dearnaley, W. J., Solares, M. J., Luqiu, W. Y., Liang, Y., Sheng, Z., McDonald, S. M., Damiano, J., McConnell, J., Dukes, M. J. & Kelly, D. F., May 24 2019, In : Small. 15, 21, 1900918.

Research output: Contribution to journalArticle

Cryoelectron Microscopy
Macromolecules
Electron microscopy
Tumors
Cells

Cryo-EM Reveals Architectural Diversity in Active Rotavirus Particles

Hauser, M., Dearnaley, W., Varano, C., Casasanta, M., McDonald, S. M. & Kelly, D., Jan 1 2019, In : Computational and Structural Biotechnology Journal. 17, p. 1178-1183 6 p.

Research output: Contribution to journalArticle

Open Access
Rotavirus
Transcription
RNA
Proteins
Messenger RNA
25 Citations (Scopus)

Crystallization kinetics and self-induced pinning in cellular patterns

Aranson, I. S., Malomed, B. A., Pismen, L. M. & Tsimring, L. S., Jul 1 2000, In : Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 62, 1 A, p. R5-R8

Research output: Contribution to journalArticle

Front Propagation
Crystallization
Nucleation
Kinetics
crystallization
7 Citations (Scopus)

Crystal structure of Zen4 in the apo state reveals a missing conformation of kinesin

Guan, R., Zhang, L., Su, Q. P., Mickolajczyk, K. J., Chen, G. Y., Hancock, W. O., Sun, Y., Zhao, Y. & Chen, Z., Apr 10 2017, In : Nature communications. 8, 14951.

Research output: Contribution to journalArticle

Kinesin
Conformations
Crystal structure
crystal structure
Neck
23 Citations (Scopus)

Cu,Zn-superoxide dismutase without Zn is folded but catalytically inactive

Nedd, S., Redler, R. L., Proctor, E. A., Dokholyan, N. V. & Alexandrova, A. N., Dec 12 2014, In : Journal of Molecular Biology. 426, 24, p. 4112-4124 13 p.

Research output: Contribution to journalArticle

Protein Unfolding
Amyotrophic Lateral Sclerosis
Molecular Dynamics Simulation
Mechanics
Superoxides
11 Citations (Scopus)
Pediatrics
Blood
Oxygenators
Tubing
Pumps
13 Citations (Scopus)

Current status of permanent total artificial hearts

Davis, P. K., Rosenberg, G., Snyder, A. J. & Pierce, W. S., Jan 1989, In : The Annals of thoracic surgery. 47, 1, p. 172-178 7 p.

Research output: Contribution to journalArticle

Artificial Heart
Equipment and Supplies
Life Style
Hand
Clinical Trials
5 Citations (Scopus)

Cyclovirobuxine D inhibits cell proliferation and induces mitochondria-mediated apoptosis in human gastric cancer cells

Wu, J., Tan, Z., Chen, J. & Dong, C., Nov 19 2015, In : Molecules. 20, 11, p. 20659-20668 10 p.

Research output: Contribution to journalArticle

Mitochondria
mitochondria
Cell proliferation
apoptosis
Stomach Neoplasms

Deacetylation of chitosan films

Wang, Y., He, Y., Liu, Q., Li, J. & Ma, X., Nov 1 2000, In : Chemical Journal on Internet. 2, 11, p. 19-22 4 p.

Research output: Contribution to journalArticle

Chitosan
Alkalies
Evaporation
Acids

Decay of the envelope soliton under the action of δ-kicks and a 'soliton standard map'

Aranson, I. S., Dec 1 1990, In : Journal of Physics A: General Physics. 23, 24, p. 5829-5840 12 p., 023.

Research output: Contribution to journalArticle

Standard Map
Envelope
Solitons
envelopes
solitary waves