Biomedical Engineering

  • United States

Research Output 1974 2020

2015
82 Citations (Scopus)

Benchmarking of dynamic simulation predictions in two software platforms using an upper limb musculoskeletal model

Saul, K. R., Hu, X., Goehler, C. M., Vidt, M., Daly, M., Velisar, A. & Murray, W. M., Oct 3 2015, In : Computer Methods in Biomechanics and Biomedical Engineering. 18, 13, p. 1445-1458 14 p.

Research output: Contribution to journal › Article

Benchmarking
Computer simulation
Muscle
Dynamic models
Kinematics
120 Citations (Scopus)

Biodegradable elastomers and silicon nanomembranes/nanoribbons for stretchable, transient electronics, and biosensors

Hwang, S. W., Lee, C. H., Cheng, H., Jeong, J. W., Kang, S. K., Kim, J. H., Shin, J., Yang, J., Liu, Z., Ameer, G. A., Huang, Y. & Rogers, J. A., May 13 2015, In : Nano letters. 15, 5, p. 2801-2808 8 p.

Research output: Contribution to journal › Article

Elastomers
Nanoribbons
Carbon Nanotubes
Silicon
elastomers
11 Citations (Scopus)

C6-ceramide nanoliposome suppresses tumor metastasis by eliciting PI3K and PKCζ tumor-suppressive activities and regulating integrin affinity modulation

Zhang, P., Fu, C., Hu, Y., Dong, C., Song, Y. & Song, E., 2015, In : Scientific reports. 5, 9275.

Research output: Contribution to journal › Article

Phosphatidylinositol 3-Kinases
Integrins
Neoplasm Metastasis
Neoplasms
Melanoma
18 Citations (Scopus)

Cancer cell surface induced peptide folding allows intracellular translocation of drug

Medina, S. H. & Schneider, J. P., May 28 2015, In : Journal of Controlled Release. 209, p. 317-326 10 p.

Research output: Contribution to journal › Article

Solubility
Peptides
Paclitaxel
Pharmaceutical Preparations
Permeability
1 Citation (Scopus)

Cell affinity separations on microfluidic devices

Gao, Y., Li, W., Zhang, Y. & Pappas, D., Jan 1 2015, In : Methods in Molecular Biology. 1286, p. 55-65 11 p.

Research output: Contribution to journal › Article

Lab-On-A-Chip Devices
Cell Separation
Glass
Microfluidics
Affinity Chromatography
21 Citations (Scopus)

Characterization of novel akermanite: Poly-ε{lunate}-caprolactone scaffolds for human adipose-derived stem cells bone tissue engineering

Zanetti, A. S., Mccandless, G. T., Chan, J. Y., Gimble, J. M. & Hayes, D. J., Apr 1 2015, In : Journal of Tissue Engineering and Regenerative Medicine. 9, 4, p. 389-404 16 p.

Research output: Contribution to journal › Article

Tissue Engineering
Scaffolds (biology)
Stem cells
Tissue engineering
Scaffolds
59 Citations (Scopus)

Chemically defined, albumin-free human cardiomyocyte generation

Lian, X., Bao, X., Zilberter, M., Westman, M., Fisahn, A., Hsiao, C., Hazeltine, L. B., Dunn, K. K., Kamp, T. J. & Palecek, S. P., Jun 30 2015, In : Nature methods. 12, 7, p. 595-596 2 p.

Research output: Contribution to journal › Letter

Glycogen Synthase Kinase 3
Serum-Free Culture Media
Serum Albumin
Albumins
40 Citations (Scopus)

Chemically-defined albumin-free differentiation of human pluripotent stem cells to endothelial progenitor cells

Bao, X., Lian, X., Dunn, K. K., Shi, M., Han, T., Qian, T., Bhute, V. J., Canfield, S. G. & Palecek, S. P., Jul 1 2015, In : Stem Cell Research. 15, 1, p. 122-129 8 p.

Research output: Contribution to journal › Article

Pluripotent Stem Cells
Albumins
Endothelial Cells
Therapeutic Human Experimentation
Glycogen Synthase Kinase 3
27 Citations (Scopus)

Circulating tumor cell isolation during resection of colorectal cancer lung and liver metastases: A prospective trial with different detection techniques

Kaifi, J. T., Kunkel, M., Das, A., Harouaka, R. A., Dicker, D. T., Li, G., Zhu, J., Clawson, G. A., Yang, Z., Reed, M. F., Gusani, N. J., Kimchi, E. T., Staveley-O’Carroll, K. F., Zheng, S. Y. & El-Deiry, W. S., Jan 1 2015, In : Cancer Biology and Therapy. 16, 5, p. 699-708 10 p.

Research output: Contribution to journal › Article

Circulating Neoplastic Cells
Cell Separation
Liver Neoplasms
Colorectal Neoplasms
Lung Neoplasms
35 Citations (Scopus)

Citrate-Based Biomaterials and Their Applications in Regenerative Engineering

Tran, R. T., Yang, J. & Ameer, G. A., Jul 1 2015, In : Annual Review of Materials Research. 45, p. 277-310 34 p.

Research output: Contribution to journal › Article

Biocompatible Materials
Biomaterials
Citric Acid
Antioxidants
Adhesives
17 Citations (Scopus)

Citrate-based biphasic scaffolds for the repair of large segmental bone defects

Guo, Y., Tran, R. T., Xie, D., Wang, Y., Nguyen, D. Y., Gerhard, E., Guo, J., Tang, J., Zhang, Z., Bai, X. & Yang, J., Feb 1 2015, In : Journal of Biomedical Materials Research - Part A. 103, 2, p. 772-781 10 p.

Research output: Contribution to journal › Article

Scaffolds
Citric Acid
Bone
Repair
Defects
5 Citations (Scopus)

Collective cell migration of smooth muscle and endothelial cells: Impact of injury versus non-injury stimuli

Ammann, K. R., DeCook, K. J., Tran, P. L., Merkle, V. M., Wong, P. K. & Slepian, M. J., Oct 15 2015, In : Journal of Biological Engineering. 9, 1

Research output: Contribution to journal › Article

Endothelial cells
Smooth Muscle Myocytes
Cell Movement
Muscle
Assays
40 Citations (Scopus)

Collective motion of self-propelled particles with memory

Nagai, K. H., Sumino, Y., Montagne, R., Aranson, I. S. & Chaté, H., Apr 24 2015, In : Physical Review Letters. 114, 16, 168001.

Research output: Contribution to journal › Article

vortices
Ornstein-Uhlenbeck process
locomotion
angular velocity
ingredients
55 Citations (Scopus)

Collisions of deformable cells lead to collective migration

Löber, J., Ziebert, F. & Aranson, I. S., Mar 17 2015, In : Scientific reports. 5, 9172.

Research output: Contribution to journal › Article

Cell Movement
pioglitazone
Cell Adhesion
Biological Phenomena
Eukaryotic Cells
6 Citations (Scopus)

Computational Modeling of Neonatal Cardiopulmonary Bypass Hemodynamics With Full Circle of Willis Anatomy

Piskin, S., Ündar, A. & Pekkan, K., Oct 2015, In : Artificial organs. 39, 10, p. E164-E175

Research output: Contribution to journal › Article

Circle of Willis
Hemodynamics
Arches
Cardiopulmonary Bypass
Anatomy

Construction of graphene-based enzyme system for rapid photo-assisted proteolysis

Cheng, G., Hao, S. J. & Zheng, S., Aug 5 2015, 2015 Transducers - 2015 18th International Conference on Solid-State Sensors, Actuators and Microsystems, TRANSDUCERS 2015. Institute of Electrical and Electronics Engineers Inc., p. 1374-1377 4 p. 7181188. (2015 Transducers - 2015 18th International Conference on Solid-State Sensors, Actuators and Microsystems, TRANSDUCERS 2015).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Proteolysis
Graphene
enzymes
Nanoreactors
graphene
8 Citations (Scopus)

Correlation between cerebral-renal near-infrared spectroscopy and ipsilateral renal perfusion parameters as clinical outcome predictors after open heart surgery in neonates and infants

Örmeci, T., Alkan-Bozkaya, T., Özyüksel, A., Ersoy, C., Ündar, A., Akçevin, A. & Türkoğlu, H., Jan 1 2015, In : Artificial organs. 39, 1, p. 53-58 6 p.

Research output: Contribution to journal › Article

Near infrared spectroscopy
Near-Infrared Spectroscopy
Surgery
Thoracic Surgery
Ultrasonography
18 Citations (Scopus)

Current techniques and outcomes in extracorporeal life support

Clark, J. B., Wang, S., Palanzo, D. A., Wise, R., Baer, L. D., Brehm, C. & Ündar, A., Nov 2015, In : Artificial organs. 39, 11, p. 926-930 5 p.

Research output: Contribution to journal › Editorial

Advanced Cardiac Life Support
Life Support Care
Extracorporeal Membrane Oxygenation
Extracorporeal Circulation
Age Factors
5 Citations (Scopus)

Cyclovirobuxine D inhibits cell proliferation and induces mitochondria-mediated apoptosis in human gastric cancer cells

Wu, J., Tan, Z., Chen, J. & Dong, C., Nov 19 2015, In : Molecules. 20, 11, p. 20659-20668 10 p.

Research output: Contribution to journal › Article

Mitochondria
mitochondria
Cell proliferation
apoptosis
Stomach Neoplasms
19 Citations (Scopus)

Design of antimicrobial peptides conjugated biodegradable citric acid derived hydrogels for wound healing

Xie, Z., Aphale, N. V., Kadapure, T. D., Wadajkar, A. S., Orr, S., Gyawali, D., Qian, G., Nguyen, K. T. & Yang, J., Dec 2015, In : Journal of Biomedical Materials Research - Part A. 103, 12, p. 3907-3918 12 p.

Research output: Contribution to journal › Article

Hydrogels
Hydrogel
Citric acid
Citric Acid
Peptides
63 Citations (Scopus)

Design Strategies and Applications of Circulating Cell-Mediated Drug Delivery Systems

Su, Y., Xie, Z., Kim, G. B., Dong, C. & Yang, J., Dec 14 2015, In : ACS Biomaterials Science and Engineering. 1, 4, p. 201-217 17 p.

Research output: Contribution to journal › Review article

Pharmaceutical Preparations
Controlled drug delivery
Medical nanotechnology
Stem cells
Drug delivery
19 Citations (Scopus)

Development of injectable citrate-based bioadhesive bone implants

Xie, D., Guo, J., Mehdizadeh, M. R., Tran, R. T., Chen, R., Sun, D., Qian, G., Jin, D., Bai, X. & Yang, J., Jan 21 2015, In : Journal of Materials Chemistry B. 3, 3, p. 387-398 12 p.

Research output: Contribution to journal › Article

Citric Acid
Bone
Durapatite
Hydroxyapatite
Tissue
2 Citations (Scopus)

Diazeniumdiolation of protamine sulfate reverses mitogenic effects on smooth muscle cells and fibroblasts

Van Lith, R., Yang, J. & Ameer, G. A., May 2015, In : Free Radical Biology and Medicine. 82, p. 13-21 9 p.

Research output: Contribution to journal › Article

Protamines
Fibroblasts
Smooth Muscle Myocytes
Muscle
Cells
25 Citations (Scopus)

Digital quantification of miRNA directly in plasma using integrated comprehensive droplet digital detection

Zhang, K., Kang, D. K., Ali, M. M., Liu, L., Labanieh, L., Lu, M., Riazifar, H., Nguyen, T. N., Zell, J. A., Digman, M. A., Gratton, E., Li, J. & Zhao, W., Jan 1 2015, In : Lab on a Chip. 15, 21, p. 4217-4226 10 p.

Research output: Contribution to journal › Article

MicroRNAs
Blood
Plasmas
Radiation counters
Biomarkers

Digital quantification of miRNA in blood using integrated comprehensive droplet digital detection (IC3D) system

Kang, D. K., Zhang, K., Ali, M. M., Liu, L., Labanieh, L., Lu, M., Riazifar, H., Nguyen, T. N., Zell, J. A., Digman, M. A., Gratton, E., Li, J. & Zhao, W., Jan 1 2015, MicroTAS 2015 - 19th International Conference on Miniaturized Systems for Chemistry and Life Sciences. Chemical and Biological Microsystems Society, p. 200-202 3 p. (MicroTAS 2015 - 19th International Conference on Miniaturized Systems for Chemistry and Life Sciences).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Blood
Plasmas
Radiation counters
RNA
Assays

DNA biosensor by using magnetic nanomaterials and serial signal amplification strategy

Yu, X. & Zheng, S. Y., Jan 1 2015, MicroTAS 2015 - 19th International Conference on Miniaturized Systems for Chemistry and Life Sciences. Chemical and Biological Microsystems Society, p. 1671-1673 3 p. (MicroTAS 2015 - 19th International Conference on Miniaturized Systems for Chemistry and Life Sciences).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Nanostructured materials
Biosensors
Amplification
DNA
Enzymes
56 Citations (Scopus)

Dynamic resting state functional connectivity in awake and anesthetized rodents

Liang, Z., Liu, X. & Zhang, N., Jan 1 2015, In : NeuroImage. 104, p. 89-99 11 p.

Research output: Contribution to journal › Article

Rodentia
Magnetic Resonance Imaging
Somatosensory Cortex
Brain Diseases
Cognition

Effect of angioplasty balloon compliance on stenotic blood vessel stress

Jhun, C. S., Rosenberg, G. & Waybill, P., Jan 1 2015, In : Journal of Medical Devices, Transactions of the ASME. 9, 3, 030944.

Research output: Contribution to journal › Article

Balloon Angioplasty
Balloons
Blood vessels
Blood Vessels
Compliance

Effect of Turbulent Flow on Hemolysis Utilizing a Turbulent Free Jet

Stauffer, M. A., Reibson, J. D., Yeager, E. E., Jhun, C-S., Newswanger, R. K., Cysyk, J., Weiss, W. & Rosenberg, G., Jun 1 2015, In : Journal of Medical Devices, Transactions of the ASME. 9, 2, p. 1-2 2 p.

Research output: Contribution to journal › Article

Hemolysis
Turbulent flow
5 Citations (Scopus)

Effects of ghost red blood cells on tumor cell adhesion in shear flow

Fu, Y., Wu, J., Sun, R., Ding, Z. R. & Dong, C., Apr 1 2015, In : Yiyong Shengwu Lixue/Journal of Medical Biomechanics. 30, 2, p. 99-103 5 p.

Research output: Contribution to journal › Article

Cell adhesion
Shear flow
Tumors
Blood
Endothelial cells
10 Citations (Scopus)

Effects of low doses of pioglitazone on resting-state functional connectivity in conscious rat brain

Crenshaw, D. G., Asin, K., Gottschalk, W. K., Liang, Z., Zhang, N. & Roses, A. D., Feb 11 2015, In : PloS one. 10, 2, e0117973.

Research output: Contribution to journal › Article

pioglitazone
Rats
Brain
brain
rats
1 Citation (Scopus)

Eighth Istanbul Symposium on Pediatric Extracorporeal Life Support Systems and Pediatric Cardiopulmonary Perfusion

Alkan-Bozkaya, T., Özyüksel, A., Salihoğlu, E., Haydin, S., Tanyildiz, M., Pekkan, K., Hatemi, A., Türköz, A., Erkan, H., Aydin, S., Kahraman, A., Savaş, A., Ersoy, C., Türkoğlu, H., Ündar, A. & Akçevin, A., May 1 2015, In : Artificial organs. 39, 5, p. E49-E55

Research output: Contribution to journal › Editorial

Pediatrics
10 Citations (Scopus)

Electron microscopic analysis of rotavirus assembly-replication intermediates

Boudreaux, C. E., Kelly, D. & McDonald, S. M., Mar 1 2015, In : Virology. 477, p. 32-41 10 p.

Research output: Contribution to journal › Article

Open Access
Rotavirus
Viral RNA
Electrons
Proteins
Subcellular Fractions
25 Citations (Scopus)

Emergence of reconfigurable wires and spinners via dynamic self-assembly

Kokot, G., Piet, D., Whitesides, G. M., Aranson, I. S. & Snezhko, A., 2015, In : Scientific reports. 5, 9528.

Research output: Contribution to journal › Article

spinners
self assembly
wire
liquid air
microparticles
2 Citations (Scopus)

Empowering Community Health Workers with Inkjet-printed Diagnostic Test Strips

Ranslow, A., Crompton, D., Mehta, K., Butler, P. J. & Adair, J. H., Jan 1 2015, In : Procedia Engineering. 107, p. 205-214 10 p.

Research output: Contribution to journal › Conference article

Pathogens
Developing countries
Profitability
Screening
Health
24 Citations (Scopus)

Enhanced immunostimulatory effects of DNA-encapsulated peptide hydrogels

Medina, S. H., Li, S., Howard, O. M. Z., Dunlap, M., Trivett, A., Schneider, J. P. & Oppenheim, J. J., Jun 1 2015, In : Biomaterials. 53, p. 545-553 9 p.

Research output: Contribution to journal › Article

Hydrogels
Peptides
DNA
Gels
Antigens
4 Citations (Scopus)

Enzymes produced by autoactivation of blood factor XII in buffer. A contribution from the Hematology at Biomaterial Interfaces Research Group

Golas, A., Pitakjakpipop, H., Rahn, M. S., Siedlecki, C. A. & Vogler, E. A., Jan 1 2015, In : Biomaterials. 37, p. 1-12 12 p.

Research output: Contribution to journal › Article

Factor XII
Biocompatible Materials
Hematology
Biomaterials
Buffers

Erratum: Separable bilayer microfiltration device for viable label-free enrichment of circulating tumour cells (Biomedical Engineering Tumour Biomarkers (2014) 4 (7392) 10.1038/srep07392)

Zhou, M. D., Hao, S., Williams, A. J., Harouaka, R. A., Schrand, B., Rawal, S., Ao, Z., Brenneman, R., Gilboa, E., Lu, B., Wang, S., Zhu, J., Datar, R., Cote, R., Tai, Y. C. & Zheng, S. Y., Jan 2015, In : Scientific reports. 5, 1 p.

Research output: Contribution to journal › Comment/debate

Erratum: Efficient differentiation of human pluripotent stem cells to endothelial progenitors via small-molecule activation of WNT signaling (Stem Cell Reports (2014) 3 (804-816))

Lian, X., Bao, X., Al-Ahmad, A., Liu, J., Wu, Y., Dong, W., Dunn, K. K., Shusta, E. V. & Palecek, S. P., Jan 13 2015, In : Stem Cell Reports. 4, 1, 1 p.

Research output: Contribution to journal › Comment/debate

Stem cells
Chemical activation
Molecules
2 Citations (Scopus)

Erratum: CD44 variant, but not standard CD44 isoforms, mediate disassembly of endothelial VE-cadherin junction on metastatic melanoma cells (FEBS Lett. (2014) 588:24 (4573-4582) doi:10.1016/j.febslet.2015.01.016))

Zhang, P., Fu, C., Bai, H., Song, E., Dong, C. & Song, Y., Feb 13 2015, In : FEBS Letters. 589, 4, 1 p.

Research output: Contribution to journal › Comment/debate

Protein Isoforms
cadherin 5
22 Citations (Scopus)

Evaluation of bone regeneration potential of dental follicle stem cells for treatment of craniofacial defects

Rezai-Rad, M., Bova, J. F., Orooji, M., Pepping, J., Qureshi, A., Del Piero, F., Hayes, D. J. & Yao, S., Nov 1 2015, In : Cytotherapy. 17, 11, p. 1572-1581 10 p.

Research output: Contribution to journal › Article

Dental Sac
Bone Regeneration
Stem Cells
Therapeutics
Transplantation
66 Citations (Scopus)

Examining kinesin processivity within a general gating framework

Andreasson, J. O. L., Milic, B., Chen, G. Y., Guydosh, N. R., Hancock, W. O. & Block, S. M., Apr 22 2015, In : eLife. 2015, 4, p. 1-44 44 p.

Research output: Contribution to journal › Article

Kinesin
Head
Neck
Cysteine
Hydrolysis
5 Citations (Scopus)

Exogenous marker-engineered mesenchymal stem cells detect cancer and metastases in a simple blood assay

Liu, L., Zhang, S. X., Aeran, R., Liao, W., Lu, M., Polovin, G., Pone, E. J. & Zhao, W., Sep 21 2015, In : Stem Cell Research and Therapy. 6, 1, 151.

Research output: Contribution to journal › Article

Open Access
Stem cells
Mesenchymal Stromal Cells
Assays
Blood
Neoplasm Metastasis
18 Citations (Scopus)

Flexibility of bacterial flagella in external shear results in complex swimming trajectories

Tournus, M., Kirshtein, A., Berlyand, L. V. & Aronson, I., Jan 1 2015, In : Journal of the Royal Society Interface. 12, 102

Research output: Contribution to journal › Article

Flagella
Bacteria
Trajectories
Shear flow
Navigation
2 Citations (Scopus)

Fontan circulatory assist device

Jhun, C-S., Newswanger, R., Cysyk, J., Stauffer, M., Weiss, W. & Rosenberg, G., Jun 1 2015, In : Journal of Medical Devices, Transactions of the ASME. 9, 2, 020924.

Research output: Contribution to journal › Article

Equipment and Supplies
10 Citations (Scopus)

Gelatin nanofiber matrices derived from schiff base derivative for tissue engineering applications

Jaiswal, D., James, R., Shelke, N. B., Harmon, M. D., Brown, J. L., Hussain, F. & Kumbar, S. G., Oct 1 2015, In : Journal of Biomedical Nanotechnology. 11, 11, p. 2067-2080 14 p.

Research output: Contribution to journal › Article

Nanofibers
Schiff Bases
Gelatin
Tissue Engineering
Tissue engineering
5 Citations (Scopus)

Generation of epithelial cell populations from human pluripotent stem cells using a small-molecule inhibitor of Src family kinases

Selekman, J. A., Lian, X. & Palecek, S. P., Jan 1 2015, In : Methods in Molecular Biology. 1307, p. 319-327 9 p.

Research output: Contribution to journal › Article

Pluripotent Stem Cells
src-Family Kinases
Epithelial Cells
Population
Keratinocytes
2 Citations (Scopus)

Generic equilibration dynamics of planar defects in trapped atomic superfluids

Scherpelz, P., Padavić, K., Murray, A., Glatz, A., Aranson, I. S. & Levin, K., Mar 18 2015, In : Physical Review A - Atomic, Molecular, and Optical Physics. 91, 3, 033621.

Research output: Contribution to journal › Article

perturbation
vortex rings
Landau-Ginzburg equations
defects
depletion
27 Citations (Scopus)

Genetic influences on resting-state functional networks: A twin study

Fu, Y., Ma, Z., Hamilton, C., Liang, Z., Hou, X., Ma, X., Hu, X., He, Q., Deng, W., Wang, Y., Zhao, L., Meng, H., Li, T. & Zhang, N., Oct 1 2015, In : Human Brain Mapping. 36, 10, p. 3959-3972 14 p.

Research output: Contribution to journal › Article

Twin Studies
Brain Diseases
Connectome
Endophenotypes
Brain
8 Citations (Scopus)

Genomic characterization of a turkey reovirus field strain by Next-Generation Sequencing

Tang, Y., Lu, H., Sebastian, A., Yeh, Y-T., Praul, C. A., Albert, I. & Zheng, S., Jun 1 2015, In : Infection, Genetics and Evolution. 32, p. 313-321 9 p.

Research output: Contribution to journal › Article

Reoviridae
arthritis
genomics
Arthritis
Avian orthoreovirus