• United States

Research Output 1974 2020

2012
14 Citations (Scopus)

Fibrin serves as a divalent ligand that regulates neutrophil-mediated melanoma cells adhesion to endothelium under shear conditions

Ozdemir, T., Zhang, P., Fu, C. & Dong, C., Apr 15 2012, In : American Journal of Physiology - Cell Physiology. 302, 8, p. C1189-C1201

Research output: Contribution to journalArticle

Fibrin
Cell Adhesion
Endothelium
Melanoma
Neutrophils
5 Citations (Scopus)
Artificial heart
Pediatrics

Influence of freezing (THERMAL) profiles on the morphology and mechanical properties of poly (l-lactic acid) scaffolds

Chinnasami, H., Breeden, F., Hayes, D. & Devireddy, R., Dec 1 2012, ASME 2012 Summer Bioengineering Conference, SBC 2012. p. 617-618 2 p. (ASME 2012 Summer Bioengineering Conference, SBC 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Lactic acid
Scaffolds
Freezing
Lactic Acid
Mechanical properties
169 Citations (Scopus)

Injectable citrate-based mussel-inspired tissue bioadhesives with high wet strength for sutureless wound closure

Mehdizadeh, M., Weng, H., Gyawali, D., Tang, L. & Yang, J., Nov 1 2012, In : Biomaterials. 33, 32, p. 7972-7983 12 p.

Research output: Contribution to journalArticle

Tissue Adhesions
Bivalvia
Citric Acid
Tissue
Fibrin Tissue Adhesive
7 Citations (Scopus)

Interconnected Cavernous Structure of Bacterial Fruiting Bodies

Harvey, C. W., Du, H., Xu, Z., Kaiser, D., Aranson, I. & Alber, M., Dec 1 2012, In : PLoS computational biology. 8, 12, e1002850.

Research output: Contribution to journalArticle

Bacterial Structures
Optical tomography
fruiting
fruiting bodies
Spores
93 Citations (Scopus)

Intrinsic organization of the anesthetized brain

Liang, Z., King, J. & Zhang, N., Jul 25 2012, In : Journal of Neuroscience. 32, 30, p. 10183-10191 9 p.

Research output: Contribution to journalArticle

Brain
Unconsciousness
Neurosciences
Coma
Consciousness
8 Citations (Scopus)

Istanbul Symposium on Neonatal and Pediatric Cardiopulmonary Bypass Procedures

Ündar, A., Alkan-Bozkaya, T., Palanzo, D., Ersayin-Kantas, H., Chin, C., Ödemiş, E., Pekkan, K., Aǧirbaşli, M. A., Türköz, A., Türköz, R., Haydin, S., Erek, E., Yalçinbaş, Y. K., Şaşmazel, A., Karaci, A. R., Erkan, H., Çicek, A. E., Bakir, I., Sarioǧlu, T., Akçevin, A. & 1 others, Aytaç, A., May 1 2012, In : Artificial organs. 36, 5, p. 463-466 4 p.

Research output: Contribution to journalEditorial

10 Citations (Scopus)

Kinesins with Extended Neck Linkers: A Chemomechanical Model for Variable-Length Stepping

Hughes, J., Hancock, W. O. & Fricks, J., May 1 2012, In : Bulletin of Mathematical Biology. 74, 5, p. 1066-1097 32 p.

Research output: Contribution to journalArticle

Kinesin
kinesin
neck
Neck
Microtubules

Material properties over-estimated by boundary conditions in biaxial tension can be corrected using finite element analysis

Jacobs, N. T., Cortes Correales, D. H., Szczesny, S., Vresilovic, E. & Elliott, D. M., Dec 1 2012, ASME 2012 Summer Bioengineering Conference, SBC 2012. p. 515-516 2 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Materials properties
Boundary conditions
Finite element method
1 Citation (Scopus)

Measurement of time-dependent functional activity of adsorbed fibrinogen and platelet adhesion on material surfaces

Xu, L., Soman, P., Scheetz, B. M. & Siedlecki, C., Dec 12 2012, Proteins at Interfaces III State of the Art. American Chemical Society, p. 373-394 22 p. (ACS Symposium Series; vol. 1120).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Platelets
Fibrinogen
Adhesion
Epitopes
Biocompatible Materials
6 Citations (Scopus)

Microtubule asters as templates for nanomaterials assembly

Verma, V., Catchmark, J. M., Brown, N. & Hancock, W. O., Dec 27 2012, In : Journal of Biological Engineering. 6, 23.

Research output: Contribution to journalArticle

Nanowhiskers
Nanostructures
Nanostructured materials
Cellulose
Microtubules
102 Citations (Scopus)

Model for self-polarization and motility of keratocyte fragments

Ziebert, F., Swaminathan, S. & Aronson, I., May 7 2012, In : Journal of the Royal Society Interface. 9, 70, p. 1084-1092 9 p.

Research output: Contribution to journalArticle

Cell Movement
Cell Shape
Polarization
Actins
Experiments

Model simulations reveal VCAM-1 augment pak activation rates to amplify P38 MAPK and VE-cadherin phosphorylation

Weidert, E., Khanna, P., Vital-Lopez, F. & Dong, C., Dec 1 2012, ASME 2012 Summer Bioengineering Conference, SBC 2012. p. 1207-1208 2 p. (ASME 2012 Summer Bioengineering Conference, SBC 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Phosphorylation
Chemical activation
10 Citations (Scopus)

Modulation of Pre-Capillary Arteriolar Pressure with Drag-Reducing Polymers: A Novel Method for Enhancing Microvascular Perfusion

Pacella, J. J., Kameneva, M. V., Brands, J., Lipowsky, H. H., Vink, H., Lavery, L. L. & Villanueva, F. S., Oct 1 2012, In : Microcirculation. 19, 7, p. 580-585 6 p.

Research output: Contribution to journalArticle

Polymers
Perfusion
Pressure
Arterioles
Aorta
51 Citations (Scopus)

Modulation of Wnt/β-catenin signaling in human embryonic stem cells using a 3-D microwell array

Azarin, S. M., Lian, X., Larson, E. A., Popelka, H. M., de Pablo, J. J. & Palecek, S. P., Mar 1 2012, In : Biomaterials. 33, 7, p. 2041-2049 9 p.

Research output: Contribution to journalArticle

Catenins
Stem cells
Modulation
Cadherins
Embryoid Bodies
12 Citations (Scopus)
Thoracic Surgery
Pediatrics
Nervous System Trauma
Doppler Ultrasonography
Somatosensory Evoked Potentials
21 Citations (Scopus)

Nanofiber diameter-dependent MAPK activity in osteoblasts

Jaiswal, D. & Brown, J. L., Nov 2012, In : Journal of Biomedical Materials Research - Part A. 100 A, 11, p. 2921-2928 8 p.

Research output: Contribution to journalArticle

Osteoblasts
Nanofibers
Mitogen-Activated Protein Kinases
Proteins
Fibers
1 Citation (Scopus)

Nanotopographic cell culture substrate: Polymer-demixed nanotextured films under cell culture conditions

Lim, J. Y., Siedlecki, C. A. & Donahue, H. J., Jan 1 2012, In : BioResearch Open Access. 1, 5, p. 252-255 4 p.

Research output: Contribution to journalArticle

Cell culture
Polymers
Cell Culture Techniques
Substrates
Fibronectins
78 Citations (Scopus)

Nonlinear field equations for aligning self-propelled rods

Peshkov, A., Aranson, I. S., Bertin, E., Chaté, H. & Ginelli, F., Dec 27 2012, In : Physical Review Letters. 109, 26, 268701.

Research output: Contribution to journalArticle

rods
alignment
19 Citations (Scopus)

Pediatric and Neonatal Extracorporeal Life Support Technology Component Utilization: Are US Clinicians Implementing New Technology?

Reed-Thurston, D., Qiu, F., Ündar, A., Haidet, K. K. & Shenberger, J., Jul 1 2012, In : Artificial organs. 36, 7, p. 607-615 9 p.

Research output: Contribution to journalArticle

Extracorporeal Membrane Oxygenation
Oxygenators
Pediatrics
Technology
Pumps
5 Citations (Scopus)

Perfusion Practices and Education of Perfusionists for Open Heart Surgery in Turkey-Current Practices and Future Suggestions

Onan, I. S., Yivli, P., Erkan, H., Akçevin, A., Undar, A. & Bakir, I., May 1 2012, In : Artificial organs. 36, 5, p. 492-495 4 p.

Research output: Contribution to journalArticle

Turkey
Surgery
Thoracic Surgery
Perfusion
Education
16 Citations (Scopus)

Photoacoustic imaging using a 9F microLinear CMUT ICE catheter

Nikoozadeh, A., Choe, J. W., Kothapalli, S. R., Moini, A., Sanjani, S. S., Kamaya, A., Oralkan, O., Gambhir, S. S. & Khuri-Yakub, P. T., Dec 1 2012, 2012 IEEE International Ultrasonics Symposium, IUS 2012. p. 24-27 4 p. 6562518. (IEEE International Ultrasonics Symposium, IUS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

platforms
optical fibers
computer programs
rings
126 Citations (Scopus)

Physical properties of collective motion in suspensions of bacteria

Sokolov, A. & Aranson, I. S., Dec 14 2012, In : Physical Review Letters. 109, 24, 248109.

Research output: Contribution to journalArticle

bacteria
physical properties
hydrodynamics
collisions
Bacillus
51 Citations (Scopus)

Pre-ART levels of inflammation and coagulation markers are strong predictors of death in a south african cohort with advanced HIV disease

Ledwaba, L., Tavel, J. A., Khabo, P., Maja, P., Qin, J., Sangweni, P., Liu, X., Follmann, D., Metcalf, J. A., Orsega, S., Baseler, B., Neaton, J. D., Lane, H. C. & The Project Phidisa Biomarkers Team, P. P. B. T., Mar 20 2012, In : PloS one. 7, 3, e24243.

Research output: Contribution to journalArticle

Biomarkers
Coagulation
coagulation
C-Reactive Protein
inflammation
90 Citations (Scopus)

Programmable hydrogels for controlled cell catch and release using hybridized aptamers and complementary sequences

Zhang, Z., Chen, N., Li, S., Battig, M. R. & Wang, Y., Sep 26 2012, In : Journal of the American Chemical Society. 134, 38, p. 15716-15719 4 p.

Research output: Contribution to journalArticle

Hydrogels
Hydrogel
Regenerative Medicine
Cell Separation
Cell Communication
80 Citations (Scopus)

Programmable release of multiple protein drugs from aptamer-functionalized hydrogels via nucleic acid hybridization

Battig, M. R., Soontornworajit, B. & Wang, Y., Aug 1 2012, In : Journal of the American Chemical Society. 134, 30, p. 12410-12413 4 p.

Research output: Contribution to journalArticle

Nucleic Acid Hybridization
Hydrogels
Nucleic acids
Nucleic Acids
Proteins
2 Citations (Scopus)

Progress of Nanobiomaterials for Theranostic Systems

Gyawali, D., Palmer, M., Tran, R. T. & Yang, J., Oct 16 2012, Biomedical Materials and Diagnostic Devices. John Wiley and Sons, p. 435-476 42 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Metal Nanoparticles
Nanomedicine
Therapeutics
Quantum Dots
Semiconductors
28 Citations (Scopus)

Properties of resistant cells generated from lung cancer cell lines treated with EGFR inhibitors

Ghosh, G., Lian, X., Kron, S. J. & Palecek, S. P., Mar 20 2012, In : BMC Cancer. 12, 95.

Research output: Contribution to journalArticle

Epidermal Growth Factor Receptor
Lung Neoplasms
Cell Line
Non-Small Cell Lung Carcinoma
Neoplastic Stem Cells
91 Citations (Scopus)

Quantitative imaging of energy expenditure in human brain

Zhu, X. H., Qiao, H., Du, F., Xiong, Q., Liu, X., Zhang, X., Ugurbil, K. & Chen, W., May 1 2012, In : NeuroImage. 60, 4, p. 2107-2117 11 p.

Research output: Contribution to journalArticle

Energy Metabolism
Mothers
Adenosine Triphosphatases
Brain
Creatine Kinase
29 Citations (Scopus)

Regional variation in human supraspinatus tendon proteoglycans: Decorin, biglycan, and aggrecan

Matuszewski, P. E., Chen, Y. L., Szczesny, S. E., Lake, S. P., Elliott, D. M., Soslowsky, L. J. & Dodge, G. R., Oct 1 2012, In : Connective Tissue Research. 53, 5, p. 343-348 6 p.

Research output: Contribution to journalArticle

Biglycan
Decorin
Aggrecans
Rotator Cuff
Tendons
679 Citations (Scopus)

Robust cardiomyocyte differentiation from human pluripotent stem cells via temporal modulation of canonical Wnt signaling

Lian, X., Hsiao, C., Wilson, G., Zhu, K., Hazeltine, L. B., Azarin, S. M., Raval, K. K., Zhang, J., Kamp, T. J. & Palecek, S. P., Jul 3 2012, In : Proceedings of the National Academy of Sciences of the United States of America. 109, 27, p. E1848-E1857

Research output: Contribution to journalArticle

Pluripotent Stem Cells
Cardiac Myocytes
Glycogen Synthase Kinase 3
Catenins
Small Interfering RNA
11 Citations (Scopus)

Sensitive sensor for mercury ion in aqueous solution by "naked-eye" and fluorescence recognition

Wu, X. L., Lai, J. P. & Zhao, Y. B., Apr 1 2012, In : Gaodeng Xuexiao Huaxue Xuebao/Chemical Journal of Chinese Universities. 33, 4, p. 695-699 5 p.

Research output: Contribution to journalArticle

Mercury
Fluorescence
Ions
Sensors
Thiourea
9 Citations (Scopus)

Study of local hydrodynamic environment in cell-substrate adhesion using side-view μPIV technology

Fu, Y., Kunz, R., Wu, J. & Dong, C., Feb 17 2012, In : PloS one. 7, 2, e30721.

Research output: Contribution to journalArticle

Rheology
Hydrodynamics
Cell Adhesion
Velocity measurement
hydrodynamics
9 Citations (Scopus)

Study on short glass fiber-reinforced poly(3-hydroxybutyrate-co-4- hydroxybutyrate) composites

Yu, Z., Yang, Y., Zhang, L., Ding, Y., Chen, X. & Xu, K., Nov 5 2012, In : Journal of Applied Polymer Science. 126, 3, p. 822-829 8 p.

Research output: Contribution to journalArticle

Hydroxybutyrates
Glass fibers
Composite materials
Coupling agents
Lubricants
97 Citations (Scopus)
Bacterial Adhesion
Biofilms
Biocompatible Materials
Biomaterials
Adhesion
16 Citations (Scopus)

The development of affinity capture devices - A nanoscale purification platform for biological in situ transmission electron microscopy

Degen, K., Dukes, M., Tanner, J. R. & Kelly, D., Mar 14 2012, In : RSC Advances. 2, 6, p. 2408-2412 5 p.

Research output: Contribution to journalArticle

Purification
Transmission electron microscopy
Molecular imaging
Imaging techniques
Silicon nitride
68 Citations (Scopus)

The endothelial glycocalyx as a barrier to leukocyte adhesion and its mediation by extracellular proteases

Lipowsky, H. H., Apr 1 2012, In : Annals of Biomedical Engineering. 40, 4, p. 840-848 9 p.

Research output: Contribution to journalArticle

Endothelial cells
Adhesion
Cell adhesion
Chemical activation
Microcirculation
5 Citations (Scopus)

The influence of device position on the flow within the Penn state 12 cc pediatric ventricular assist device

Schönberger, M., Deutsch, S. & Manning, K. B., Sep 1 2012, In : ASAIO Journal. 58, 5, p. 481-493 13 p.

Research output: Contribution to journalArticle

Pediatrics
Heart-Assist Devices
Equipment and Supplies
Blood
Flow patterns
5 Citations (Scopus)

Theoretical analysis of novel quasi-3D microscopy of cell deformation

Qiu, J., Baik, A. D., Lu, X. L., Hillman, E. M. C., Zhuang, Z., Dong, C. & Guo, X. E., Jun 1 2012, In : Cellular and Molecular Bioengineering. 5, 2, p. 165-172 8 p.

Research output: Contribution to journalArticle

Microscopy
Theoretical Analysis
Microscopic examination
Cell
Signal-To-Noise Ratio
3 Citations (Scopus)

Thermal Unfolding Pathway of PHD2 Catalytic Domain in Three Different PHD2 Species: Computational Approaches

Hadi-Alijanvand, H., Proctor, E. A., Goliaei, B., Dokholyan, N. V. & Moosavi-Movahedi, A. A., Oct 15 2012, In : PloS one. 7, 10, e47061.

Research output: Contribution to journalArticle

procollagen-proline dioxygenase
Prolyl Hydroxylases
active sites
Catalytic Domain
Hot Temperature

Tunable hyaluronic acid hydrogels to alter and understand left ventricular remodeling

Tous, E., Ifkovits, J. L., Dorsey, S. M., Szczesny, S., Koomalsingh, K. J., Shuto, T., Soeda, T., Gorman, J. H., Elliott, D. M., Gorman, R. C. & Burdick, J. A., Dec 1 2012, ASME 2012 Summer Bioengineering Conference, SBC 2012. p. 1013-1014 2 p. (ASME 2012 Summer Bioengineering Conference, SBC 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Hyaluronic acid
Hydrogels
54 Citations (Scopus)

Tuning membrane phase separation using nonlipid amphiphiles

Muddana, H. S., Chiang, H. H. & Butler, P. J., Feb 8 2012, In : Biophysical journal. 102, 3, p. 489-497 9 p.

Research output: Contribution to journalArticle

Lipids
Phosphorylcholine
Membranes
Benzyl Alcohol
Vitamin E
10 Citations (Scopus)

Türkiye'de doĝumsal kalp hastaliklari cerrahisinin bugünü ve yarini

Translated title of the contribution: Congenital heart surgery in Turkey: Today and tomorrowÜndar, A., Bakir, I., Haydin, S., Erek, E., Ödemis, E., Yivli, P., Aĝirbașli, M., Alkan-Bozkaya, T., Türköz, A., Türköz, R., Şaşmazel, A., Karaci, A. R., Çiçek, A. E., Yalçinbaş, Y. K., Akçevin, A. & Sarioĝlu, T., 2012, In : Turkish Journal of Thoracic and Cardiovascular Surgery. 20, 2, p. 181-185 5 p.

Research output: Contribution to journalEditorial

6 Citations (Scopus)

Türkiye'de doǧuştan kalp hastaliklari cerrahisinde kullanilan tekniklerin ve malzemelerin seçimi için öneriler

Translated title of the contribution: Recommendations for the selection of techniques and components used in congenital heart surgery in TurkeyÜndar, A., Haydin, S., Erek, E., Yivli, P., Ödemiş, E., Aǧirbaşli, M., Alkan-Bozkaya, T., Türköz, A., Türköz, R., Şaşmazel, A., Karaci, A. R., Çiçek, A. E., Yalçinbaş, Y., Akçevin, A., Sarioǧlu, T. & Bakir, I., Oct 10 2012, In : Turkish Journal of Thoracic and Cardiovascular Surgery. 20, 2, p. 399-405 7 p.

Research output: Contribution to journalReview article

Turkey
Thoracic Surgery
Heart-Lung Machine
Oxygenators
Cardiopulmonary Bypass
31 Citations (Scopus)

Understanding resistance to combination chemotherapy

Pritchard, J. R., Lauffenburger, D. A. & Hemann, M. T., Oct 1 2012, In : Drug Resistance Updates. 15, 5-6, p. 249-257 9 p.

Research output: Contribution to journalReview article

Combination Drug Therapy
Pharmaceutical Preparations
Neoplasms
Therapeutics
Investigational Therapies
4 Citations (Scopus)

Use of Urinary Biomarkers of Renal Ischemia in a Lamb Preclinical Left Ventricular Assist Device Model

Cooper, T., Zhong, Q., Nabity, M., Rosenberg, G. & Weiss, W., Sep 1 2012, In : Artificial organs. 36, 9, p. 820-824 5 p.

Research output: Contribution to journalArticle

Left ventricular assist devices
Heart-Assist Devices
Biomarkers
Ischemia
Pathology
2 Citations (Scopus)

Viable circulating tumor cell enrichment by flexible micro spring array

Harouaka, R. A., Zhou, M. D., Yeh, Y-T., Khan, W. J., Allerton, J. & Zheng, S., Dec 14 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2012. p. 6269-6272 4 p. 6347427. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Circulating Neoplastic Cells
Tumors
Cells
Blood
Throughput
Circulating Neoplastic Cells
Tumors
Cells
Blood
Throughput
2 Citations (Scopus)

Welcome to the 8th International Conference on Pediatric Mechanical Circulatory Support Systems & Pediatric Cardiopulmonary Perfusion

Ündar, A., Akçevin, A., Pauliks, L. B., Palanzo, D., Durandy, Y. & Myers, J. L., May 1 2012, In : Artificial organs. 36, 5, p. 460-462 3 p.

Research output: Contribution to journalLetter

Pediatrics
Heart-Assist Devices
Cardiovascular System
Perfusion
Newborn Infant
3 Citations (Scopus)

Z-microscopy for parallel axial imaging with micro mirror array

Yang, C., Shi, K., Zhou, M., Zheng, S., Yin, S. & Liu, Z., Dec 3 2012, In : Applied Physics Letters. 101, 23, 231111.

Research output: Contribution to journalArticle

mirrors
microscopy
numerical analysis
diffraction