• United States

Research Output 1974 2020

2019

Rapid Single-Cell Microbiological Analysis: Toward Precision Management of Infections and Dysbiosis

Li, H., Morowitz, M., Thomas, N. & Wong, P. K., Dec 1 2019, In : SLAS Technology. 24, 6, p. 603-605 3 p.

Research output: Contribution to journalArticle

Dysbiosis
Single-Cell Analysis
Antibiotics
Anti-Bacterial Agents
Infection
1 Citation (Scopus)

Ring PMUT array based miniaturized photoacoustic endoscopy device

Dangi, A., Agrawal, S., Tiwari, S., Jadhav, S., Cheng, C., Datta, G. R., Trolier-McKinstry, S. E., Pratap, R. & Kothapalli, S-R., Jan 1 2019, Photons Plus Ultrasound: Imaging and Sensing 2019. Oraevsky, A. A. & Wang, L. V. (eds.). SPIE, 1087811. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10878).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Endoscopy
Photoacoustic effect
Transducers
transducers
Ultrasonics

Sex-dependent VEGF expression underlies variations in human pluripotent stem cell to endothelial progenitor differentiation

Randolph, L. N., Bao, X., Oddo, M. & Lian, X. L., Dec 1 2019, In : Scientific reports. 9, 1, 16696.

Research output: Contribution to journalArticle

Open Access
Pluripotent Stem Cells
Vascular Endothelial Growth Factor A
Sex Characteristics
Efficiency
Cell Differentiation

Shape-programmed 3D printed swimming microtori for the transport of passive and active agents

Baker, R. D., Montenegro-Johnson, T., Sediako, A. D., Thomson, M. J., Sen, A., Lauga, E. & Aranson, I. S., Dec 1 2019, In : Nature communications. 10, 1, 4932.

Research output: Contribution to journalArticle

Open Access
Nanotubes
Active Biological Transport
Nanorods
nanorods
nanofabrication
3 Citations (Scopus)

Simultaneous transrectal ultrasound and photoacoustic human prostate imaging

Kothapalli, S. R., Sonn, G. A., Choe, J. W., Nikoozadeh, A., Bhuyan, A., Park, K. K., Cristman, P., Fan, R., Moini, A., Lee, B. C., Wu, J., Carver, T. E., Trivedi, D., Shiiba, L., Steinberg, I., Huland, D. M., Rasmussen, M. F., Liao, J. C., Brooks, J. D., Khuri-Yakub, P. T. & 1 others, Gambhir, S. S., Aug 28 2019, In : Science Translational Medicine. 11, 507, aav2169.

Research output: Contribution to journalArticle

Prostate
Molecular Imaging
Indocyanine Green
Ultrasonics
Hemoglobins

Single simulation platform for both optical and radio frequency induced thermoacoustic tomography

Fadden, C., Srinivasan, V. & Kothapalli, S-R., Jan 1 2019, Photons Plus Ultrasound: Imaging and Sensing 2019. Oraevsky, A. A. & Wang, L. V. (eds.). SPIE, 108785O. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10878).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Thermoacoustics
Radio
Tomography
radio frequencies
Software
1 Citation (Scopus)

Stress and Exposure Time on von Willebrand Factor Degradation

Jhun, C. S., Siedlecki, C., Xu, L., Lukic, B., Newswanger, R., Yeager, E., Reibson, J., Cysyk, J., Weiss, W. & Rosenberg, G., Feb 1 2019, In : Artificial organs. 43, 2, p. 199-206 8 p.

Research output: Contribution to journalArticle

von Willebrand Factor
Molecular Weight
Molecular weight
Degradation
Capillary Tubing

The blood compatibility challenge. Part 3: Material associated activation of blood cascades and cells

Gorbet, M., Sperling, C., Maitz, M. F., Siedlecki, C., Werner, C. & Sefton, M. V., Aug 1 2019, In : Acta Biomaterialia. 94, p. 25-32 8 p.

Research output: Contribution to journalReview article

Blood Cells
Thrombosis
Blood
Chemical activation
Dissent and Disputes
1 Citation (Scopus)

The Orphan Kinesin PAKRP2 Achieves Processive Motility via a Noncanonical Stepping Mechanism

Gicking, A. M., Wang, P., Liu, C., Mickolajczyk, K. J., Guo, L., Hancock, W. O. & Qiu, W., Apr 2 2019, In : Biophysical journal. 116, 7, p. 1270-1281 12 p.

Research output: Contribution to journalArticle

Kinesin
Proteins
Neck
Hydrolysis
Adenosine Triphosphate
2 Citations (Scopus)

Thermal performance and surface analysis of steel-supported platinum nanoparticles designed for bio-oil catalytic upconversion during radio frequency-based inductive heating

Bursavich, J., Abu-Laban, M., Muley, P. D., Boldor, D. & Hayes, D. J., Mar 1 2019, In : Energy Conversion and Management. 183, p. 689-697 9 p.

Research output: Contribution to journalArticle

Surface analysis
Platinum
Nanoparticles
Heating
Steel

Thin Film PZT-Based PMUT Arrays for Deterministic Particle Manipulation

Cheng, C. Y., Dangi, A., Ren, L., Tiwari, S., Benoit, R. R., Qiu, Y., Lay, H. S., Agrawal, S., Pratap, R., Kothapalli, S. R., Mallouk, T. E., Cochran, S. & Trolier-Mckinstry, S., Oct 2019, In : IEEE transactions on ultrasonics, ferroelectrics, and frequency control. 66, 10, p. 1605-1615 11 p., 8753665.

Research output: Contribution to journalArticle

Ultrasonic transducers
Piezoelectric transducers
Diaphragms
manipulators
transducers

Transcriptomic Profiling of Adipose Derived Stem Cells Undergoing Osteogenesis by RNA-Seq

Shaik, S., Martin, E. C., Hayes, D. J., Gimble, J. M. & Devireddy, R. V., Dec 1 2019, In : Scientific reports. 9, 1, 11800.

Research output: Contribution to journalArticle

Open Access
Stromal Cells
Osteogenesis
Extracellular Matrix
Stem Cells
RNA

Understanding Dense Active Nematics from Microscopic Models

Patelli, A., Djafer-Cherif, I., Aranson, I. S., Bertin, E. & Chaté, H., Dec 18 2019, In : Physical Review Letters. 123, 25, 258001.

Research output: Contribution to journalArticle

arches
hydrodynamic equations
defects
alignment
phase diagrams
1 Citation (Scopus)

Welcome to the Fifteenth International conference on Pediatric Mechanical Circulatory Support Systems and Pediatric Cardiopulmonary Perfusion

Law, S., Chai, P. & Ündar, A., Apr 2019, In : Artificial organs. 43, 4, p. 329-333 5 p.

Research output: Contribution to journalEditorial

Pediatrics
Cardiovascular System
Perfusion

β-Methylamino-L-alanine substitution of serine in SOD1 suggests a direct role in ALS etiology

Proctor, E. A., Mowrey, D. D. & Dokholyan, N. V., Jul 2019, In : PLoS computational biology. 15, 7, e1007225.

Research output: Contribution to journalArticle

Open Access
etiology
Amyotrophic Lateral Sclerosis
Alanine
alanine
serine
2018
6 Citations (Scopus)

3D printing of poly(ϵ-caprolactone)/poly(D,L-lactide-co-glycolide)/hydroxyapatite composite constructs for bone tissue engineering

Moncal, K. K., Heo, D. N., Godzik, K. P., Sosnoski, D. M., Mrowczynski, O. D., Rizk, E., Ozbolat, V., Tucker, S. M., Gerhard, E. M., Dey, M., Lewis, G., Yang, J. & Ozbolat, I. T., Jul 27 2018, In : Journal of Materials Research. 33, 14, p. 1972-1986 15 p.

Research output: Contribution to journalArticle

tissue engineering
Durapatite
Hydroxyapatite
Tissue engineering
printing
1 Citation (Scopus)

A carbon nanotube integrated microfluidic device for blood plasma extraction

Yeh, Y. T., Lin, Z., Zheng, S. Y. & Terrones, M., Dec 1 2018, In : Scientific reports. 8, 1, 13623.

Research output: Contribution to journalArticle

Lab-On-A-Chip Devices
Carbon Nanotubes
Equipment and Supplies
Biomarkers
Microtechnology
22 Citations (Scopus)

Achieving high permeability and enhanced selectivity for Angstrom-scale separations using artificial water channel membranes

Shen, Y. X., Song, W. C., Ryan Barden, D., Ren, T., Lang, C., Feroz, H., Henderson, C. B., Saboe, P. O., Tsai, D., Yan, H., Butler, P. J., Bazan, G. C., Phillip, W. A., Hickey, III, R. J., Cremer, P. S., Vashisth, H. & Kumar, M., Dec 1 2018, In : Nature communications. 9, 1, 2294.

Research output: Contribution to journalArticle

Aquaporins
Permeability
permeability
selectivity
membranes
2 Citations (Scopus)

Acquired Von Willebrand Syndrome and Blood Pump Design

Rosenberg, G., Siedlecki, C. A., Jhun, C. S., Weiss, W. J., Manning, K., Deutsch, S. & Pierce, W., Dec 2018, In : Artificial organs. 42, 12, p. 1119-1124 6 p.

Research output: Contribution to journalReview article

Heart-Assist Devices
Left ventricular assist devices
Blood
Pumps
Shear stress
3 Citations (Scopus)

Acute effects of vortioxetine and duloxetine on resting-state functional connectivity in the awake rat

Pérez, P. D., Ma, Z., Hamilton, C., Sánchez, C., Mørk, A., Pehrson, A. L., Bundgaard, C. & Zhang, N., Jan 1 2018, In : Neuropharmacology. 128, p. 379-387 9 p.

Research output: Contribution to journalArticle

Brain
Serotonin Receptors
Magnetic Resonance Imaging
Antidepressive Agents
Pharmaceutical Preparations
3 Citations (Scopus)

Advanced Cell and Tissue Biomanufacturing

Ye, K., Kaplan, D. L., Bao, G., Bettinger, C., Forgacs, G., Dong, C., Khademhosseini, A., Ke, Y., Leong, K., Sambanis, A., Sun, W. & Yin, P., Jul 9 2018, In : ACS Biomaterials Science and Engineering. 4, 7, p. 2292-2307 16 p.

Research output: Contribution to journalReview article

Tissue
Biomedical engineering
Biotechnology
Industry
2 Citations (Scopus)

A gapmer aptamer nanobiosensor for real-time monitoring of transcription and translation in single cells

Wang, S., Xiao, Y., Zhang, D. D. & Wong, P. K., Feb 2018, In : Biomaterials. 156, p. 56-64 9 p.

Research output: Contribution to journalArticle

Transcription
Monitoring
Nucleic Acid Probes
Proteins
Messenger RNA
6 Citations (Scopus)
Biocompatible Materials
Blood Coagulation
Coagulation
Biomaterials
Bacterial Adhesion
3 Citations (Scopus)

An experimental and computational study of the inferior vena cava hemodynamics under respiratory-induced collapse of the infrarenal IVC

Tedaldi, E., Montanari, C., Aycock, K. I., Sturla, F., Redaelli, A. & Manning, K. B., Apr 1 2018, In : Medical Engineering and Physics. 54, p. 44-55 12 p.

Research output: Contribution to journalArticle

Hemodynamics
Inferior Vena Cava
Vena Cava Filters
Computational fluid dynamics
Flow rate
1 Citation (Scopus)
Artificial heart
Artificial Heart
Extracorporeal Membrane Oxygenation
Pediatrics
Heart-Assist Devices
2 Citations (Scopus)

Anomalous gray matter structural networks in recent onset post-traumatic stress disorder

Qi, S., Mu, Y. F., Cui, L. B., Zhang, J., Guo, F., Tan, Q. R., Shi, M., Liu, K., Xi, Y. B., Zhang, N. Y., Zhang, X. L., He, Y., Yang, J. & Yin, H., Apr 1 2018, In : Brain Imaging and Behavior. 12, 2, p. 390-401 12 p.

Research output: Contribution to journalArticle

Post-Traumatic Stress Disorders
Occipital Lobe
Prefrontal Cortex
Parahippocampal Gyrus
Gyrus Cinguli

Anti-microbial peptide facilitated cytosolic delivery of metallic gold nanomaterials

Kapur, A., Wang, W., Diaz Hernandez, J., Medina, S., Schneider, J. P. & Mattoussi, H., Jan 1 2018, Colloidal Nanoparticles for Biomedical Applications XIII. Parak, W. J., Osinski, M. & Liang, X-J. (eds.). SPIE, 105070R. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10507).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nanostructures
Nanostructured materials
Gold
Nanoparticles
Nanocrystals

An Ultrasensitive Calcium Reporter System via CRISPR-Cas9-Mediated Genome Editing in Human Pluripotent Stem Cells

Jiang, Y., Zhou, Y., Bao, X., Chen, C., Randolph, L. N., Du, J. & Lian, X. L., Nov 30 2018, In : iScience. 9, p. 27-35 9 p.

Research output: Contribution to journalArticle

Open Access
Clustered Regularly Interspaced Short Palindromic Repeats
Cell Engineering
Pluripotent Stem Cells
Optical Imaging
Calcium

A Portable Device Integrated with Aligned Carbon Nanotubes for Sensitive Virus Capture and Detection

Yeh, Y-T., Lu, H., Zheng, S. & Terrones Maldonado, M., Oct 26 2018, 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2018. Institute of Electrical and Electronics Engineers Inc., Vol. 2018-July. p. 6072-6075 4 p. 8513515

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Carbon Nanotubes
Viruses
Carbon nanotubes
Point-of-Care Systems
Equipment and Supplies
25 Citations (Scopus)

Aptamer-conjugated extracellular nanovesicles for targeted drug delivery

Wan, Y., Wang, L., Zhu, C., Zheng, Q., Wang, G., Tong, J., Fang, Y., Xia, Y., Cheng, G., He, X. & Zheng, S. Y., Feb 1 2018, In : Cancer Research. 78, 3, p. 798-808 11 p.

Research output: Contribution to journalArticle

Pharmaceutical Preparations
Ligands
Antigen Receptors
Drug Delivery Systems
Cell- and Tissue-Based Therapy
5 Citations (Scopus)

A single simulation platform for hybrid photoacoustic and RF-acoustic computed tomography

Fadden, C. & Kothapalli, S. R., Sep 6 2018, In : Applied Sciences (Switzerland). 8, 9, 1568.

Research output: Contribution to journalArticle

Thermoacoustics
Photoacoustic effect
Tomography
radio frequencies
platforms
20 Citations (Scopus)

A Spontaneous 3D Bone-On-a-Chip for Bone Metastasis Study of Breast Cancer Cells

Hao, S., Ha, L., Cheng, G., Wan, Y., Xia, Y., Sosnoski, D. M., Mastro, A. M. & Zheng, S., Mar 22 2018, In : Small. 14, 12, 1702787.

Research output: Contribution to journalArticle

Bone
Cells
Breast Neoplasms
Neoplasm Metastasis
Bone and Bones
7 Citations (Scopus)

Bone and plasma citrate is reduced in osteoporosis

Chen, H., Wang, Y., Dai, H., Tian, X., Cui, Z. K., Chen, Z., Hu, L., Song, Q., Liu, A., Zhang, Z., Xiao, G., Yang, J., Jiang, Y. & Bai, X., Sep 1 2018, In : Bone. 114, p. 189-197 9 p.

Research output: Contribution to journalArticle

Citric Acid
Osteoporosis
Bone and Bones
Bone Density
Pelvic Bones
3 Citations (Scopus)

Casein Kinase 1 Epsilon Regulates Glioblastoma Cell Survival

Varghese, R. T., Young, S., Pham, L., Liang, Y., Pridham, K. J., Guo, S., Murphy, S., Kelly, D. F. & Sheng, Z., Dec 1 2018, In : Scientific reports. 8, 1, 13621.

Research output: Contribution to journalArticle

Open Access
Casein Kinase Iepsilon
Glioblastoma
Cell Survival
Catenins
Stem Cells

Chapter 4: Directed differentiation of human pluripotent stem cells for therapeutic applications

Randolph, L. N., Witmer, E. B. & Lian, X., Jan 1 2018, Frontiers in Nanobiomedical Research. World Scientific Publishing Co. Pte Ltd, p. 75-100 26 p. (Frontiers in Nanobiomedical Research; vol. 10).

Research output: Chapter in Book/Report/Conference proceedingChapter

Pluripotent Stem Cells
Stem cells
Cell Lineage
Therapeutics
Intercellular Signaling Peptides and Proteins
1 Citation (Scopus)

Characterizing the HeartMate II left ventricular assist device outflow using particle image velocimetry

Rowlands, G. W., Good, B. C., Deutsch, S. & Manning, K. B., Jul 1 2018, In : Journal of Biomechanical Engineering. 140, 7, 071008.

Research output: Contribution to journalArticle

Left ventricular assist devices
Heart-Assist Devices
Rheology
Velocity measurement
von Willebrand Factor
8 Citations (Scopus)

Citrate-Based Fluorescent Biomaterials

Shan, D., Hsieh, J. T., Bai, X. & Yang, J., Sep 19 2018, In : Advanced Healthcare Materials. 7, 18, 1800532.

Research output: Contribution to journalReview article

Biocompatible Materials
Biomaterials
Citric Acid
Fluorescence
Optical Imaging
6 Citations (Scopus)

Citrate-based materials fuel human stem cells by metabonegenic regulation

Ma, C., Tian, X., Kim, J. P., Xie, D., Ao, X., Shan, D., Lin, Q., Hudock, M. R., Bai, X. & Yang, J., Dec 11 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 50, p. E11741-E11750

Research output: Contribution to journalArticle

Phosphoserine
Citric Acid
Stem Cells
Bone Regeneration
Mesenchymal Stromal Cells
8 Citations (Scopus)

Citrate chemistry and biology for biomaterials design

Ma, C., Gerhard, E., Lu, D. & Yang, J., Sep 1 2018, In : Biomaterials. 178, p. 383-400 18 p.

Research output: Contribution to journalArticle

Medical nanotechnology
Betaine
Biocompatible Materials
Biomaterials
Citric Acid
12 Citations (Scopus)

Co-activation patterns in resting-state fMRI signals

Liu, X., Zhang, N., Chang, C. & Duyn, J. H., Oct 15 2018, In : NeuroImage. 180, p. 485-494 10 p.

Research output: Contribution to journalReview article

Magnetic Resonance Imaging
Brain
3 Citations (Scopus)

Cold Active Motion: How Time-Independent Disorder Affects the Motion of Self-Propelled Agents

Peruani, F. & Aranson, I. S., Jun 6 2018, In : Physical Review Letters. 120, 23, 238101.

Research output: Contribution to journalArticle

disorders
particle trajectories
torque
equations of motion
trapping
3 Citations (Scopus)

Comparative proteomic analyses of human adipose extracellular matrices decellularized using alternative procedures

Thomas-Porch, C., Li, J., Zanata, F., Martin, E. C., Pashos, N., Genemaras, K., Poche, J. N., Totaro, N. P., Bratton, M. R., Gaupp, D., Frazier, T., Wu, X., Ferreira, L. M., Tian, W., Wang, G., Bunnell, B. A., Flynn, L., Hayes, D. & Gimble, J. M., Sep 2018, In : Journal of Biomedical Materials Research - Part A. 106, 9, p. 2481-2493 13 p.

Research output: Contribution to journalArticle

Scaffolds
Detergents
Tissue
Proteins
Mass spectrometry
3 Citations (Scopus)

Comparison of thermally actuated retro-diels-alder release groups for nanoparticle based nucleic acid delivery

Abu-Laban, M., Kumal, R. R., Casey, J., Becca, J., LaMaster, D., Pacheco, C. N., Sykes, D. G., Jensen, L., Haber, L. H. & Hayes, D. J., Sep 15 2018, In : Journal of Colloid And Interface Science. 526, p. 312-321 10 p.

Research output: Contribution to journalArticle

Nucleic acids
Thiophene
Nucleic Acids
Thiophenes
Pyrroles

Constrained Gaussian process with application in tissue-engineering scaffold biodegradation

Zeng, L., Deng, X. & Yang, J., May 4 2018, In : IISE Transactions. 50, 5, p. 431-447 17 p.

Research output: Contribution to journalArticle

Scaffolds (biology)
Biodegradation
Tissue engineering
Scaffolds
Fabrication
3 Citations (Scopus)

Construction of versatile multilayered composite nanoparticles from a customized nanogel template

Zhang, J., Jia, J., Kim, J. P., Yang, F., Wang, X., Shen, H., Xu, S., Yang, J. & Wu, D., Mar 2018, In : Bioactive Materials. 3, 1, p. 87-96 10 p.

Research output: Contribution to journalArticle

Nanoparticles
Composite materials
Periosteum
Oncology
Orthopedics
2 Citations (Scopus)

Contact activation by the intrinsic pathway of blood plasma coagulation

Yan, Y., Xu, L. C., Vogler, E. A. & Siedlecki, C. A., Jan 1 2018, Hemocompatibility of Biomaterials for Clinical Applications: Blood-Biomaterials Interactions. Elsevier Inc., p. 3-28 26 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Blood Coagulation
Enzyme Precursors
Biocompatible Materials
Fibrin
High Molecular Weight Kininogens
Biomedical engineering
Formability
Stem cells
10 Citations (Scopus)

Detection of sepsis in patient blood samples using CD64 expression in a microfluidic cell separation device

Zhang, Y., Li, W., Zhou, Y., Johnson, A., Venable, A., Hassan, A., Griswold, J. & Pappas, D., Jan 7 2018, In : Analyst. 143, 1, p. 241-249 9 p.

Research output: Contribution to journalArticle

Open Access
Microfluidics
Cell Separation
Sepsis
Blood
blood
2 Citations (Scopus)

Determination of Reynolds Shear Stress Level for Hemolysis

Jhun, C. S., Stauffer, M. A., Reibson, J. D., Yeager, E. E., Newswanger, R. K., Taylor, J. O., Manning, K. B., Weiss, W. J. & Rosenberg, G., Jan 1 2018, In : ASAIO journal (American Society for Artificial Internal Organs : 1992). 64, 1, p. 63-69 7 p.

Research output: Contribution to journalArticle

Hemolysis
Shear stress
Hemoglobin
Hemoglobins
Blood

Development of brain-wide connectivity architecture in awake rats

Ma, Z., Ma, Y. & Zhang, N., Aug 1 2018, In : NeuroImage. 176, p. 380-389 10 p.

Research output: Contribution to journalArticle

Brain
Communication
Cerebral Dominance
Neuroanatomy
Cluster Analysis