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2019

CryoEM reconstruction approaches to resolve asymmetric features

Goetschius, D. J., Lee, H. & Hafenstein, S., 2019, Advances in Virus Research. Rey, F. A. (ed.). Academic Press Inc., p. 73-91 19 p. (Advances in Virus Research; vol. 105).

Research output: Chapter in Book/Report/Conference proceedingChapter

Engineering allostery into proteins

Gorman, S. D., D’Amico, R. N., Winston, D. S. & Boehr, D. D., Jan 1 2019, Advances in Experimental Medicine and Biology. Springer, p. 359-384 26 p. (Advances in Experimental Medicine and Biology; vol. 1163).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

HIV–HBV and HIV–HCV coinfection and liver cancer development

Hu, J., Liu, K. & Luo, J., Jan 1 2019, Cancer Treatment and Research. Springer International Publishing, p. 231-250 20 p. (Cancer Treatment and Research; vol. 177).

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Human papillomavirus infection and cervical cancer in HIV+ women

Du, P., Jan 1 2019, Cancer Treatment and Research. Springer International Publishing, p. 105-129 25 p. (Cancer Treatment and Research; vol. 177).

Research output: Chapter in Book/Report/Conference proceedingChapter

2018

Chapter 4: Directed differentiation of human pluripotent stem cells for therapeutic applications

Randolph, L. N., Witmer, E. B. & Lian, X., Jan 1 2018, Frontiers in Nanobiomedical Research. World Scientific Publishing Co. Pte Ltd, p. 75-100 26 p. (Frontiers in Nanobiomedical Research; vol. 10).

Research output: Chapter in Book/Report/Conference proceedingChapter

Chemical Tools for Studying the Impact of cis/trans Prolyl Isomerization on Signaling: A Case Study on RNA Polymerase II Phosphatase Activity and Specificity

Burkholder, N. T., Medellin, B., Irani, S., Matthews, W., Showalter, S. A. & Zhang, Y. J., Jan 1 2018, Methods in Enzymology. Allen, K. N. (ed.). Academic Press Inc., p. 269-297 29 p. (Methods in Enzymology; vol. 607).

Research output: Chapter in Book/Report/Conference proceedingChapter

Cytolytic T lymphocyte clones in anti-viral immunity: Effector function in vivo and mechanism of action

Braciale, T. J., Lukacher, A. E., Sweetser, M. T. & Braciale, V. L., Jan 1 2018, Cytolytic Lymphocytes and Complement Effectors of the Immune System. CRC Press, Vol. 2. p. 161-174 14 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Detecting purinosome metabolon formation with fluorescence microscopy

Pedley, A. M. & Benkovic, S. J., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 279-289 11 p. (Methods in Molecular Biology; vol. 1764).

Research output: Chapter in Book/Report/Conference proceedingChapter

Fluorescence-Based Measurements of Store-Operated Ca 2+ Entry in Cancer Cells Using Fluo-4 and Confocal Live-Cell Imaging

Lu, F., Sun, J., Sun, T., Cheng, H. & Yang, S., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 63-68 6 p. (Methods in Molecular Biology; vol. 1843).

Research output: Chapter in Book/Report/Conference proceedingChapter

Gene-gene interactions: An essential component to modeling complexity for precision medicine

Hall, M. A., Cole, B. S. & Moore, J. H., Jan 1 2018, Encyclopedia of Bioinformatics and Computational Biology: ABC of Bioinformatics. Elsevier, Vol. 1-3. p. 171-177 7 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Immunosuppression by intestinal stromal cells

Pinchuk, I. & Powell, D. W., Jan 1 2018, Advances in Experimental Medicine and Biology. Springer New York LLC, p. 115-129 15 p. (Advances in Experimental Medicine and Biology; vol. 1060).

Research output: Chapter in Book/Report/Conference proceedingChapter

Predicting Off-Target Effects of Therapeutic Antiviral Ribonucleosides: Inhibition of Mitochondrial RNA Transcription

Arnold, J. J. & Cameron, C. E., Feb 21 2018, Mitochondrial Dysfunction Caused by Drugs and Environmental Toxicants. wiley, Vol. 1-2. p. 407-417 11 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Role of host factors in the subcellular trafficking of gag proteins and genomic RNA leading to virion assembly

Chen, E. C. & Parent, L. J., Jan 1 2018, Retrovirus-Cell Interactions. Elsevier, p. 273-315 43 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Strategies to discover novel cellular factors involved in retrovirus replication

Kaddis Maldonado, R. J., Chen, E. C. & Parent, L. J., Jan 1 2018, Retrovirus-Cell Interactions. Elsevier, p. 527-568 42 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Stress erythropoiesis model systems

Bennett, L. F., Liao, C. & Paulson, R., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 91-102 12 p. (Methods in Molecular Biology; vol. 1698).

Research output: Chapter in Book/Report/Conference proceedingChapter

5 Scopus citations

Study of the Endogenous CRAC Channel Using shRNA-Mediated Gene Silencing

Zhang, X., Spinelli, A. M., Zhang, W. & Trebak, M., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 137-145 9 p. (Methods in Molecular Biology; vol. 1843).

Research output: Chapter in Book/Report/Conference proceedingChapter

The Use of 13C Direct-Detect NMR to Characterize Flexible and Disordered Proteins

Cook, E. C., Usher, G. A. & Showalter, S. A., 2018, Methods in Enzymology. Rhoades, E. (ed.). Academic Press Inc., p. 81-100 20 p. (Methods in Enzymology; vol. 611).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations
2017

Cardiovascular and hemostatic disorders: Role of STIM and orai proteins in vascular Disorders

Tanwar, J., Trebak, M. & Motiani, R. K., Jan 1 2017, Advances in Experimental Medicine and Biology. Springer New York LLC, p. 425-452 28 p. (Advances in Experimental Medicine and Biology; vol. 993).

Research output: Chapter in Book/Report/Conference proceedingChapter

7 Scopus citations

Directed differentiation of human pluripotent stem cells for therapeutic applications

Randolph, L. N., Witmer, E. B. & Lian, X., Jan 1 2017, Tissue Engineering and Nanotheranostics. World Scientific Publishing Co. Pte Ltd, p. 75-100 26 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Generation and infection of organotypic cultures with Epstein-Barr virus

Temple, R. M., Meyers, C. & Sample, C. E., Jan 1 2017, Methods in Molecular Biology. Humana Press Inc., p. 65-78 14 p. (Methods in Molecular Biology; vol. 1532).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

In vitro assays for RNA binding and protein priming of hepatitis B virus polymerase

Clark, D. N., Jones, S. A. & Hu, J., Jan 1 2017, Methods in Molecular Biology. Humana Press Inc., p. 157-177 21 p. (Methods in Molecular Biology; vol. 1540).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Participation of Fos and Jun in multistage carcinogenesis

Glick, A. & Yuspa, S. H., Jan 1 2017, The FOS and JUN Families of Transcription Factors. CRC Press, p. 275-293 19 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Store-independent orai channels regulated by STIM

Zhang, X., Gueguinou, M. & Trebak, M., Jan 1 2017, Calcium Entry Channels in Non-Excitable Cells. CRC Press, p. 197-213 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

5 Scopus citations

The Regulation of Pathways of Inflammation and Resolution in Immune Cells and Cancer Stem Cells by Selenium

Diwakar, B. T., Korwar, A. M., Paulson, R. F. & Prabhu, K. S., Jan 1 2017, Advances in Cancer Research. Academic Press Inc., p. 153-172 20 p. (Advances in Cancer Research; vol. 136).

Research output: Chapter in Book/Report/Conference proceedingChapter

9 Scopus citations

Vitamin D and Inflammatory Bowel Disease

Cantorna, M. T. & Bruce, D., Dec 14 2017, Health, Disease and Therapeutics. Elsevier Inc., Vol. 2. p. 1025-1036 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2016

A High-Throughput Biological Calorimetry Core: Steps to Startup, Run, and Maintain a Multiuser Facility

Yennawar, N. H., Fecko, J. A., Showalter, S. A. & Bevilacqua, P. C., Jan 1 2016, Methods in Enzymology. Academic Press Inc., p. 435-460 26 p. (Methods in Enzymology; vol. 567).

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Assessing Coupled Protein Folding and Binding Through Temperature-Dependent Isothermal Titration Calorimetry

Sahu, D., Bastidas, M., Lawrence, C. W., Noid, W. G. & Showalter, S. A., Jan 1 2016, Methods in Enzymology. Academic Press Inc., p. 23-45 23 p. (Methods in Enzymology; vol. 567).

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Scopus citations

Directed endothelial progenitor differentiation from human pluripotent stem cells via wnt activation under defined conditions

Bao, X., Lian, X. & Palecek, S. P., Jan 1 2016, Methods in Molecular Biology. Humana Press Inc., p. 183-196 14 p. (Methods in Molecular Biology; vol. 1481).

Research output: Chapter in Book/Report/Conference proceedingChapter

11 Scopus citations

Expression and purification of mitochondrial RNA polymerase and transcription factor a from drosophila melanogaster

Gajewski, J. P., Arnold, J. J., Salminen, T. S., Kaguni, L. S. & Cameron, C. E., Jan 1 2016, Methods in Molecular Biology. Humana Press Inc., p. 199-210 12 p. (Methods in Molecular Biology; vol. 1351).

Research output: Chapter in Book/Report/Conference proceedingChapter

Gambogic acid and its role in chronic diseases

Pandey, M. K., Karelia, D. & Amin, S. G., Sep 1 2016, Advances in Experimental Medicine and Biology. Springer New York LLC, p. 375-395 21 p. (Advances in Experimental Medicine and Biology; vol. 928).

Research output: Chapter in Book/Report/Conference proceedingChapter

8 Scopus citations

Induction and purification of c. Difficile phage tail-like particles

Hegarty, J. P., Sangster, W., Ashley, R. E., Myers, R., Hafenstein, S. & Stewart, D. B., Jan 1 2016, Methods in Molecular Biology. Humana Press Inc., p. 167-175 9 p. (Methods in Molecular Biology; vol. 1476).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Polymerase mechanism-based method of viral attenuation

Lee, C. A., August, A., Arnold, J. J. & Cameron, C. E., Jan 1 2016, Methods in Molecular Biology. Humana Press Inc., p. 83-104 22 p. (Methods in Molecular Biology; vol. 1349).

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Scopus citations

Protein conformational motions: Enzyme catalysis

Huang, X., Tony Liu, C. & Benkovic, S. J., May 17 2016, Understanding Enzymes: Function, Design, Engineering and Analysis. Pan Stanford Publishing Pte. Ltd., p. 21-46 26 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

The role of omega-3 fatty acids in breast cancer prevention

Manni, A., El-Bayoumy, K., Skibinski, C. G., Thompson, H. J., Santucci-Pereira, J., Bidinotto, L. T. & Russo, J., Jan 1 2016, Trends in Breast Cancer Prevention. Springer International Publishing, p. 51-81 31 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

The role of selenoproteins in resolution of inflammation

Diwakar, B. T., Finch, E. R., Liao, C., Shay, A. E. & Prabhu, K. S., Jan 1 2016, Selenium: Its Molecular Biology and Role in Human Health, Fourth Edition. Springer International Publishing, p. 499-510 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Transient receptor potential canonical 7 (TRPC7), a calcium (Ca2+) permeable non-selective cation channel

Zhang, X., Spinelli, A. M., Masiello, T. & Trebak, M., May 1 2016, Advances in Experimental Medicine and Biology. Springer New York LLC, p. 251-264 14 p. (Advances in Experimental Medicine and Biology; vol. 898).

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations
2015

Chromatin dynamics and genome organization in development and disease

Deng, C., Patel, B., Lin, X., Li, Y. & Huang, S., Jan 1 2015, Epigenetic Gene Expression and Regulation. Elsevier Inc., p. 95-115 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Forms of selenium in cancer prevention

El-Bayoumy, K., Sinha, R. & Richie, J., Jan 1 2015, Diversity of Selenium Functions in Health and Disease. CRC Press, p. 137-172 36 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

6 Scopus citations

Influence of gut microbiota on hepatic lipogenesis and disease pathogenesis

Singh, V., Yeoh, B. S., Ntambi, J. M. & Vijay-Kumar, M., Jan 1 2015, Hepatic De Novo Lipogenesis and Regulation of Metabolism. Springer International Publishing, p. 189-209 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Intra-cellular tyrosine kinase

Irby, R. & Yeatman, T. J., Jan 1 2015, Molecular Oncology: Causes of Cancer and Targets for Treatment. Cambridge University Press, p. 231-242 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Selenium mediates a switch in macrophage polarization

Prabhu, K. S., Kudva, A. K. & Nelson, S. M., Jan 1 2015, Diversity of Selenium Functions in Health and Disease. CRC Press, p. 293-308 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Techniques Analyzing Chromatin Modifications at Specific Single Loci

Chen, X. A., Sun, J. & Wang, Y., Jun 17 2015, Epigenetic Technological Applications. Elsevier Inc., p. 79-100 22 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2014

Epithelial Skin Cancer

Glick, A. B. & Yuspa, S. H., Mar 2014, The Molecular Basis of Cancer: Fourth Edition. Elsevier Inc.

Research output: Chapter in Book/Report/Conference proceedingChapter

Metabolomics

Belton, B. R., Correll, J. B. & Patterson, A. D., Jan 1 2014, Applications of High-Resolution Mass Spectrometry in Drug Discovery and Development. Future Medicine Ltd., p. 106-118 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Native human papillomavirus production, quantification, and infectivity analysis

Biryukov, J., Cruz, L., Ryndock, E. J. & Meyers, C., Oct 27 2014, Cervical Cancer: Methods and Protocols. Springer New York, p. 317-331 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

3 Scopus citations

Prostate cancer: How helpful are natural agents for prevention?

Pandey, M. K., Kunnumakkara, A. B. & Amin, S. G., Dec 9 2014, Anticancer Properties of Fruits and Vegetables: A Scientific Review. World Scientific Publishing Co., p. 251-276 26 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Stressed for success: How the berry's wild origins result in multifaceted health protections

Lila, M. A., Kellogg, J., Grace, M. H., Yousef, G. G., Kraft, T. B. & Rogers, R. B., Jan 13 2014, X International Symposium on Vaccinium and Other Superfruits. van Kooten, O. & Brouns, F. (eds.). p. 23-44 22 p. (Acta Horticulturae; vol. 1017).

Research output: Chapter in Book/Report/Conference proceedingChapter

4 Scopus citations
2013

Detection of senescence-associated heterochromatin foci (SAHF)

Aird, K. M. & Zhang, R., 2013, Cell Senescence: Methods and Protocols. Humana Press Inc., p. 185-196 12 p. (Methods in Molecular Biology; vol. 965).

Research output: Chapter in Book/Report/Conference proceedingChapter

35 Scopus citations

DNA Replication Fork, Bacterial

Spiering, M. M. & Benkovic, S. J., Feb 15 2013, Encyclopedia of Biological Chemistry: Second Edition. Elsevier Inc., p. 114-117 4 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Emerging Roles for Native Orai Ca2+ Channels in Cardiovascular Disease

Ruhle, B. & Trebak, M., 2013, Current Topics in Membranes. Academic Press Inc., p. 209-235 27 p. (Current Topics in Membranes; vol. 71).

Research output: Chapter in Book/Report/Conference proceedingChapter

31 Scopus citations