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Widespread and precise reprogramming of yeast protein-genome interactions in response to heat shock

Vinayachandran, V., Reja, R., Rossi, M. J., Park, B., Rieber, L., Mittal, C., Mahony, S. & Pugh, B. F., Mar 2018, In : Genome research. 28, 3, p. 357-366 10 p.

Research output: Contribution to journalArticle

16 Scopus citations

Widespread nonhematopoietic tissue distribution by transplanted human progenitor cells with high aldehyde dehydrogenase activity

Hess, D. A., Craft, T. P., Wirthlin, L., Hohm, S., Zhou, P., Eades, W. C., Creer, M. H., Sands, M. S. & Nolta, J. A., Mar 1 2008, In : STEM CELLS. 26, 3, p. 611-620 10 p.

Research output: Contribution to journalArticle

67 Scopus citations

Wnt/β-catenin signaling induces the expression and activity of βTrCP ubiquitin ligase receptor

Spiegelman, V. S., Slaga, T. J., Pagano, M., Minamoto, T., Ronai, Z. & Fuchs, S. Y., Jan 1 2000, In : Molecular cell. 5, 5, p. 877-882 6 p.

Research output: Contribution to journalArticle

131 Scopus citations

Wnt/β-catenin signaling regulates yes-associated protein (YAP) gene expression in colorectal carcinoma cells

Konsavage, W. M., Kyler, S. L., Rennoll, S. A., Jin, G. & Yochum, G. S., Apr 6 2012, In : Journal of Biological Chemistry. 287, 15, p. 11730-11739 10 p.

Research output: Contribution to journalArticle

164 Scopus citations

Wnt signaling stimulates transcriptional outcome of the hedgehog pathway by stabilizing GLI1 mRNA

Noubissi, F. K., Goswami, S., Sanek, N. A., Kawakami, K., Minamoto, T., Moser, A., Grinblat, Y. & Spiegelman, V. S., Nov 15 2009, In : Cancer Research. 69, 22, p. 8572-8578 7 p.

Research output: Contribution to journalArticle

59 Scopus citations

Wounding prior to challenge substantially improves infectivity of cottontail rabbit papillomavirus and allows for standardization of infection

Cladel, N. M., Hu, J., Balogh, K., Mejia, A. & Christensen, N. D., Mar 1 2008, In : Journal of Virological Methods. 148, 1-2, p. 34-39 6 p.

Research output: Contribution to journalArticle

34 Scopus citations
9 Scopus citations

Xenobiotic metabolomics: Major impact on the metabolome

Johnson, C. H., Patterson, A. D., Idle, J. R. & Gonzalez, F. J., Jan 20 2012, In : Annual Review of Pharmacology and Toxicology. 52, p. 37-56 20 p.

Research output: Contribution to journalArticle

121 Scopus citations

Xenobiotic microsomal epoxide hydrolase: 5′ sequence of the human gene

Wilson, N. M. & Omiecinski, C. J., Aug 14 1989, In : BBA - Gene Structure and Expression. 1008, 3, p. 357-358 2 p.

Research output: Contribution to journalArticle

9 Scopus citations

XIAP inhibition and generation of reactive oxygen species enhances TRAIL sensitivity in inflammatory breast cancer cells

Allensworth, J. L., Aird, K. M., Aldrich, A. J., Batinic-Haberle, I. & Devi, G. R., Jul 1 2012, In : Molecular cancer therapeutics. 11, 7, p. 1518-1527 10 p.

Research output: Contribution to journalArticle

53 Scopus citations

X-linked inhibitor of apoptosis protein inhibits apoptosis in inflammatory breast cancer cells with acquired resistance to an ErbB1/2 tyrosine kinase inhibitor

Aird, K. M., Ghanayem, R. B., Peplinski, S., Lyerly, H. K. & Devi, G. R., May 2010, In : Molecular cancer therapeutics. 9, 5, p. 1432-1442 11 p.

Research output: Contribution to journalArticle

45 Scopus citations

X-ray crystal structure of a reiterative transcription complex reveals an atypical RNA extension pathway

Murakami, K. S., Shin, Y., Turnbough, C. L. & Molodtsov, V., Aug 1 2017, In : Proceedings of the National Academy of Sciences of the United States of America. 114, 31, p. 8211-8216 6 p.

Research output: Contribution to journalArticle

4 Scopus citations

X-ray crystal structure of escherichia coli RNA polymerase σ70 holoenzyme

Murakami, K. S., Mar 29 2013, In : Journal of Biological Chemistry. 288, 13, p. 9126-9134 9 p.

Research output: Contribution to journalArticle

119 Scopus citations

X-ray crystal structure of the polymerase domain of the bacteriophage N4 virion RNA polymerase

Murakami, K. S., Davydova, E. K. & Rothman-Denes, L. B., Apr 1 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 13, p. 5046-5051 6 p.

Research output: Contribution to journalArticle

13 Scopus citations

X-ray crystal structures elucidate the nucleotidyl transfer reaction of transcript initiation using two nucleotides

Gleghorn, M. L., Davydova, E. K., Basu, R., Rothman-Denes, L. B. & Murakami, K. S., Mar 1 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 9, p. 3566-3571 6 p.

Research output: Contribution to journalArticle

17 Scopus citations

X-ray Crystal Structures of Escherichia coli RNA Polymerase with Switch Region Binding Inhibitors Enable Rational Design of Squaramides with an Improved Fraction Unbound to Human Plasma Protein

Molodtsov, V., Fleming, P. R., Eyermann, C. J., Ferguson, A. D., Foulk, M. A., McKinney, D. C., Masse, C. E., Buurman, E. T. & Murakami, K. S., Apr 9 2015, In : Journal of Medicinal Chemistry. 58, 7, p. 3156-3171 16 p.

Research output: Contribution to journalArticle

19 Scopus citations

X-ray crystal structures of the Escherichia coli RNA polymerase in complex with benzoxazinorifamycins

Molodtsov, V., Nawarathne, I. N., Scharf, N. T., Kirchhoff, P. D., Showalter, H. D. H., Garcia, G. A. & Murakami, K. S., Jun 13 2013, In : Journal of Medicinal Chemistry. 56, 11, p. 4758-4763 6 p.

Research output: Contribution to journalArticle

32 Scopus citations

XSWR-C and INO80 chromatin remodelers recognize nucleosome-free regions near +1 nucleosomes

Yen, K., Vinayachandran, V. & Pugh, B. F., Sep 12 2013, In : Cell. 154, 6, 1 p.

Research output: Contribution to journalArticle

110 Scopus citations

Yap1 promotes proliferation of transiently amplifying stress erythroid progenitors during erythroid regeneration

Hao, S., Matsui, Y., Lai, Z. C. & Paulson, R. F., Dec 2019, In : Experimental Hematology. 80, p. 42-54.e4

Research output: Contribution to journalArticle

YAP1 subgroup supratentorial ependymoma requires TEAD and nuclear factor I-mediated transcriptional programmes for tumorigenesis

Pajtler, K. W., Wei, Y., Okonechnikov, K., Silva, P. B. G., Vouri, M., Zhang, L., Brabetz, S., Sieber, L., Gulley, M., Mauermann, M., Wedig, T., Mack, N., Imamura Kawasawa, Y., Sharma, T., Zuckermann, M., Andreiuolo, F., Holland, E., Maass, K., Körkel-Qu, H., Liu, H. K. & 13 others, Sahm, F., Capper, D., Bunt, J., Richards, L. J., Jones, D. T. W., Korshunov, A., Chavez, L., Lichter, P., Hoshino, M., Pfister, S. M., Kool, M., Li, W. & Kawauchi, D., Dec 1 2019, In : Nature communications. 10, 1, 3914.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Yeast DNA polymerase η makes functional contacts with the DNA minor groove only at the incoming nucleoside triphosphate

Washington, M. T., Wolfle, W. T., Spratt, T. E., Prakash, L. & Prakash, S., Apr 29 2003, In : Proceedings of the National Academy of Sciences of the United States of America. 100, 9, p. 5113-5118 6 p.

Research output: Contribution to journalArticle

37 Scopus citations

Δ 12-prostaglandin J 3, an omega-3 fatty acid-derived metabolite, selectively ablates leukemia stem cells in mice

Hegde, S., Kaushal, N., Ravindra, K. C., Chiaro, C., Hafer, K. T., Gandhi, U. H., Thompson, J. T., Van Den Heuvel, J. P., Kennett, M. J., Hankey, P., Paulson, R. F. & Prabhu, K. S., Dec 22 2011, In : Blood. 118, 26, p. 6909-6919 11 p.

Research output: Contribution to journalArticle

48 Scopus citations

Δ9-tetrahydrocannabinol disrupts estrogen-signaling through up-regulation of estrogen receptor β (ERβ)

Takeda, S., Yoshida, K., Nishimura, H., Harada, M., Okajima, S., Miyoshi, H., Okamoto, Y., Amamoto, T., Watanabe, K., Omiecinski, C. J. & Aramaki, H., Jul 15 2013, In : Chemical research in toxicology. 26, 7, p. 1073-1079 7 p.

Research output: Contribution to journalArticle

20 Scopus citations

αchymotrypsin catalyzed hydrolysis of n-benzoyl-l-tyrosine ethyl ester anchored in βcyclodextrin

Kumble, S. P. & Ramadoss, C. S., Jan 1 1995, In : Biocatalysis and Biotransformation. 12, 4, p. 281-291 11 p.

Research output: Contribution to journalArticle

8 Scopus citations

α-Substituted β-Lactams Via A Convenient Annelation Of Imines

Manhas, M. S., Lai, B., Amin, S. & Bose, A. K., Jan 1 1976, In : Synthetic Communications. 6, 6, p. 435-441 7 p.

Research output: Contribution to journalArticle

26 Scopus citations

β2-microglobulin knockout mice are highly susceptible to polyoma virus tumorigenesis

Drake, D. R. & Lukacher, A. E., Dec 5 1998, In : Virology. 252, 1, p. 275-284 10 p.

Research output: Contribution to journalArticle

36 Scopus citations

β-escin inhibits NNK-induced lung adenocarcinoma and ALDH1A1 and RhoA/Rock expression in A/J mice and growth of H460 human lung cancer cells

Patlolla, J. M. R., Qian, L., Biddick, L., Zhang, Y., Desai, D., Amin, S., Lightfoot, S. & Rao, C. V., Oct 1 2013, In : Cancer Prevention Research. 6, 10, p. 1140-1149 10 p.

Research output: Contribution to journalArticle

15 Scopus citations

δ9-THC modulation of fatty acid 2-hydroxylase (FA2H) gene expression: Possible involvement of induced levels of PPARα in MDA-MB-231 breast cancer cells

Takeda, S., Ikeda, E., Su, S., Harada, M., Okazaki, H., Yoshioka, Y., Nishimura, H., Ishii, H., Kakizoe, K., Taniguchi, A., Tokuyasu, M., Himeno, T., Watanabe, K., Omiecinski, C. J. & Aramaki, H., Dec 4 2014, In : Toxicology. 326, p. 18-24 7 p.

Research output: Contribution to journalArticle

20 Scopus citations
26 Scopus citations