Research Output

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Conference article
2017

Clinical immersion and team-based design: Into a third year

Kadlowec, J., Merrill, T., Sood, S., Ryan, J. G., Attaluri, A. & Hirsh, R. A., Jun 24 2017, In : ASEE Annual Conference and Exposition, Conference Proceedings. 2017-June

Research output: Contribution to journalConference article

1 Scopus citations
2015

Empowering Community Health Workers with Inkjet-printed Diagnostic Test Strips

Ranslow, A., Crompton, D., Mehta, K., Butler, P. J. & Adair, J. H., Jan 1 2015, In : Procedia Engineering. 107, p. 205-214 10 p.

Research output: Contribution to journalConference article

2 Scopus citations
2014

Applications and design of reinforced silicon nitride windows for in situ liquid transmission electron microscopy

Dukes, M. J., Dukes, A. D., Klein, K. L., Thomas, R., Kelly, D. F. & Damiano, J., Aug 1 2014, In : Microscopy and Microanalysis. 20, 3, p. 1090-1091 2 p.

Research output: Contribution to journalConference article

Open Access
1 Scopus citations
2011

A case study in using ZFA and PATO for describing histological phenotypes in the larval zebrafish

Canada, B., Thomas, G., Cooper, T. & Cheng, K., Dec 1 2011, In : CEUR Workshop Proceedings. 833, 1 p.

Research output: Contribution to journalConference article

An ontology-based approach to linking model organisms and resources to human diseases

Mungall, C. J., Anderson, D., Bandrowski, A., Canada, B., Chatyr-Aryamontri, A., Cheng, K., Conn, P. M., Dolinski, K., Ellisman, M., Eppig, J., Grethe, J. S., Kemnitz, J., Iadonato, S., Larson, S. D., Magness, C., Martone, M. E., Tyers, M., Torniai, C., Troyanskaya, O., Turner, J. & 2 others, Westerfield, M. & Haendel, M. A., Dec 1 2011, In : CEUR Workshop Proceedings. 833, p. 263-265 3 p.

Research output: Contribution to journalConference article

SHIRAZ and CABERNET: Leveraging automation, crowdsourcing, and ontologies to improve the accuracy and throughput of zebrafish histological phenotype annotations

Canada, B., Thomas, G., Schleicher, J., Wang, J. Z. & Cheng, K. C., Dec 1 2011, In : CEUR Workshop Proceedings. 833, p. 288-289 2 p.

Research output: Contribution to journalConference article

2009
2005

3D image fusion and guidance for computer-assisted bronchoscopy

Higgins, W. E., Rai, L., Merritt, S. A., Lu, K., Linger, N. T. & Yu, K. C., Dec 1 2005, In : Proceedings of SPIE - The International Society for Optical Engineering. 6016, 60160A.

Research output: Contribution to journalConference article

10 Scopus citations

Classification of chromosome sequences with entropy kernel and LKPLS algorithm

Liu, Z. & Chen, D., Oct 31 2005, In : Lecture Notes in Computer Science. 3644, PART I, p. 543-551 9 p.

Research output: Contribution to journalConference article

1 Scopus citations

Determinstic lateral displacement MEMS device for continuous blood cell separation

Zheng, S., Yung, R., Tai, Y. C. & Kasdan, H., Oct 25 2005, In : Proceedings of the IEEE International Conference on Micro Electro Mechanical Systems (MEMS). p. 851-854 4 p.

Research output: Contribution to journalConference article

39 Scopus citations

Methods for the fabrication of IR windows from nanoparticulates

Sengupta, S., Revur, R. R., Schorr, J. R., Adair, J. & Szepesi, C., Oct 25 2005, In : Proceedings of SPIE - The International Society for Optical Engineering. 5786, p. 206-216 11 p., 23.

Research output: Contribution to journalConference article

2 Scopus citations

System for 3D visualization and data mining of large vascular trees

Yu, K. C., Ritman, E. L. & Higgins, W. E., Dec 1 2005, In : Proceedings of SPIE - The International Society for Optical Engineering. 6016, 60160B.

Research output: Contribution to journalConference article

3 Scopus citations

Virtual bronchoscopy for quantitative airway analysis

Kiraly, A. P., Reinhardt, J. M., Huffman, E. A., McLennan, G. & Higgins, W. E., Aug 25 2005, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5746, I, p. 369-383 15 p., 41.

Research output: Contribution to journalConference article

18 Scopus citations

X-ray diffraction and H-storage in ultrasmall palladium particles

Narehood, D. G., Goto, H., Kishore, S., Adair, J. H., Nelson, J. A., Sokol, P. E. & Eklund, P. C., Dec 1 2005, In : ACS Division of Fuel Chemistry, Preprints. 50, 2, p. 546-547 2 p.

Research output: Contribution to journalConference article

X-ray diffraction and H-storage in ultra-small Pd particles

Narehood, D., Goto, H., Kishore, S., Adair, J. H., Nelson, J. A., Sokol, P. E. & Eklund, P. C., Dec 1 2005, In : ACS National Meeting Book of Abstracts. 230

Research output: Contribution to journalConference article

2004

CT-video registration accuracy for virtual guidance of bronchoscopy

Helferty, J. P., Hoffman, E. A., McLennan, G. & Higgins, W. E., Jul 5 2004, In : Proceedings of SPIE - The International Society for Optical Engineering. 5369, p. 150-164 15 p.

Research output: Contribution to journalConference article

11 Scopus citations

DNA-directed assembly of barcoded nanowires onto glass slides for biosensing applications

Stoermer, R. L. & Keating, C. D., Dec 1 2004, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5588, p. 51-58 8 p., 07.

Research output: Contribution to journalConference article

3 Scopus citations

Graphical tools for improved definition of 3D arterial trees

Yu, K. C., Ritman, E. L. & Higgins, W. E., Jul 6 2004, In : Proceedings of SPIE - The International Society for Optical Engineering. 5369, p. 485-495 11 p.

Research output: Contribution to journalConference article

3 Scopus citations

Nano-to-micro self-assembly using shear flow devices

Shih, C. Y., Zheng, S., Meng, E., Tai, Y. C., Liu, Y. & Stoddart, J. F., Jul 19 2004, In : Proceedings of the IEEE International Conference on Micro Electro Mechanical Systems (MEMS). p. 422-425 4 p.

Research output: Contribution to journalConference article

4 Scopus citations

Side view imaging for three dimensional microflow profile reconstruction

Yang, S., Dong, C., Leyton-Mange, J. & Zahn, J. D., Dec 1 2004, In : American Society of Mechanical Engineers, Fluids Engineering Division (Publication) FED. 260, p. 333-337 5 p., IMECE2004-60978.

Research output: Contribution to journalConference article

Three-dimensional true color topographical analysis of the pulmonary airways

Suter, M., Reinhardt, J. M., Sonka, M., Higgins, W., Hoffman, E. A. & McLennan, G., Jul 5 2004, In : Proceedings of SPIE - The International Society for Optical Engineering. 5369, p. 189-198 10 p.

Research output: Contribution to journalConference article

5 Scopus citations
2003

Integrated bronchoscopic video tracking and 3D CT registration for virtual bronchoscopy

Higgins, W. E., Helferty, J. P. & Padfield, D. R., Sep 19 2003, In : Proceedings of SPIE - The International Society for Optical Engineering. 5031, p. 80-89 10 p.

Research output: Contribution to journalConference article

16 Scopus citations

Toward reliable multi-generational analysis of anatomical trees in 3D high-resolution CT images

Yu, K. C., Ritman, E. L., Kiraly, A. P., Wan, S. Y., Zamir, M. & Higgins, W. E., Sep 22 2003, In : Proceedings of SPIE - The International Society for Optical Engineering. 5031, p. 178-186 9 p.

Research output: Contribution to journalConference article

8 Scopus citations
2002

Bio-MEMS sensors for real-time shear stress on endothelial cell dynamics

Hsiai, T. K., Cho, S. K., Wong, P. K., Ing, M., Navab, M., Reddy, S., Demer, L. L. & Ho, C. M., Dec 1 2002, In : Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 3, p. 1828-1829 2 p.

Research output: Contribution to journalConference article

4 Scopus citations

Cell tracking velocimetry for monocyte/endothelial cell interactions

Wong, P. K., Kwong, C. H., Hsiai, T. & Ho, C. M., Dec 1 2002, In : Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 1, p. 343-344 2 p.

Research output: Contribution to journalConference article

Markov chain Monte Carlo algorithms for optimizing grazing incidence optics for wide-field x-ray survey imaging

Roming, P. W. A., Liechty, J. C., Sohn, D. H., Shoemaker, J. R., Burrows, D. N. & Garmire, G. P., Jan 1 2002, In : Proceedings of SPIE - The International Society for Optical Engineering. 4496, p. 146-153 8 p.

Research output: Contribution to journalConference article

7 Scopus citations

Multi-color single filter photobleaching analysis for measuring gene expression

Wong, P. K., Chun, L. J. & Ho, C. M., Dec 1 2002, In : Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 1, p. 629-630 2 p.

Research output: Contribution to journalConference article

1 Scopus citations

Uncertainty in oil production predicted by percolation theory

King, P. R., Buldyrev, S. V., Dokholyan, N. V., Havlin, S., Lopez, E., Paul, G. & Stanley, H. E., Apr 1 2002, In : Physica A: Statistical Mechanics and its Applications. 306, p. 376-380 5 p.

Research output: Contribution to journalConference article

20 Scopus citations
2001

Electrochemical synthesis of multi-material nanowires as building blocks for functional nanostructures

Pena, D. J., Razavi, B., Smith, P. A., Mbindyo, J. K., Natan, M. J., Mayer, T. S., Mallouk, T. E. & Keating, C. D., Jan 1 2001, In : Materials Research Society Symposium - Proceedings. 636, p. D461-D466

Research output: Contribution to journalConference article

15 Scopus citations

Experiments in virtual-endoscopic guidance of bronchoscopy

Helferty, J. P., Sherbondy, A. J., Kiraly, A. P., Turlington, J. Z., Hoffman, E. A., McLennan, G. & Higgins, W. E., Jan 1 2001, In : Proceedings of SPIE - The International Society for Optical Engineering. 4321, p. 111-121 11 p.

Research output: Contribution to journalConference article

8 Scopus citations

Materials Research Society Symposium - Proceedings: Preface

Lyon, L. A., Stranick, S. J., Keating, C. D. & Searson, P. C., Jan 1 2001, In : Materials Research Society Symposium - Proceedings. 635

Research output: Contribution to journalConference article

Multigenerational analysis and visualization of large 3D vascular images

Wan, S. Y., Ritman, E. L. & Higgins, W. E., Jan 1 2001, In : Proceedings of SPIE - The International Society for Optical Engineering. 4322, 2, p. 766-775 10 p.

Research output: Contribution to journalConference article

1 Scopus citations

Nanoparticle-amplified surface plasmon resonance for detection of DNA hybridization

Goodrich, G. P., Nicewarner, S. R., He, L., Natan, M. J. & Keating, C. D., Jan 1 2001, In : Proceedings of SPIE - The International Society for Optical Engineering. 4258, p. 80-85 6 p.

Research output: Contribution to journalConference article

1 Scopus citations
2000

Manipulation of lipid bilayer membranes in solution using laser tweezers and microsphere 'handles'

Keating, C. D., D'Onofrio, T. G., Hatzor, A., Whelpley, A. S., Natan, M. J. & Weiss, P. S., Jan 1 2000, In : Proceedings of SPIE - The International Society for Optical Engineering. 3924, p. 18-26 9 p.

Research output: Contribution to journalConference article

3 Scopus citations

Potential role of [Ca2+]i as a down regulator of integrin-mediated tumor cell migration to type IV collagen

Hodgson, L. & Dong, C., Dec 1 2000, In : Annals of Biomedical Engineering. 28, SUPPL. 1

Research output: Contribution to journalConference article

Virtual bronchoscopic approach for combining 3D CT and endoscopic video

Sherbondy, A. J., Kiraly, A. P., Austin, A. L., Helferty, J. P., Wan, S. Y., Turlington, J. Z., Yang, T., Zhang, C., Hoffman, E. A., McLennan, G. & Higgins, W. E., Jan 1 2000, In : Proceedings of SPIE - The International Society for Optical Engineering. 3978, p. 104-116 13 p.

Research output: Contribution to journalConference article

26 Scopus citations
1999

Applications of statistical physics to the oil industry: Predicting oil recovery using percolation theory

King, P. R., Buldyrev, S. V., Dokholyan, N. V., Havlin, S., Lee, Y., Paul, G. & Stanley, H. E., Dec 1 1999, In : Physica A: Statistical Mechanics and its Applications. 274, 1, p. 60-66 7 p.

Research output: Contribution to journalConference article

30 Scopus citations

Distribution of shortest paths in percolation

Dokholyan, N. V., Buldyrev, S. V., Havlin, S., King, P. R., Lee, Y. & Stanley, H. E., Apr 15 1999, In : Physica A: Statistical Mechanics and its Applications. 266, 1-4, p. 55-61 7 p.

Research output: Contribution to journalConference article

17 Scopus citations

Effects of particulate debris morphology on the rolling wear behavior of all-steel and Si3N4-steel bearing element couples

Mitchell, D. J., Mecholsky, J. J. & Adair, J. H., Dec 1 1999, In : Ceramic Engineering and Science Proceedings. 20, 4, p. 123-132 10 p.

Research output: Contribution to journalConference article

2 Scopus citations

Expansion of tandem repeats and oligomer clustering in coding and noncoding DNA sequences

Buldyrev, S. V., Dokholyan, N. V., Havlin, S., Stanley, H. E. & Stanley, R. H. R., Nov 1 1999, In : Physica A: Statistical Mechanics and its Applications. 273, 1-2, p. 19-32 14 p.

Research output: Contribution to journalConference article

6 Scopus citations

Extraction and analysis of large vascular networks in 3D micro-CT images

Wan, S. Y., Ritman, E. L. & Higgins, W. E., Jan 1 1999, In : Proceedings of SPIE - The International Society for Optical Engineering. 3660, p. 322-334 13 p.

Research output: Contribution to journalConference article

1 Scopus citations

Physics of sand castles: maximum angle of stability in wet and dry granular media

Barabási, A. L., Albert, R. & Schiffer, P., Apr 15 1999, In : Physica A: Statistical Mechanics and its Applications. 266, 1-4, p. 366-371 6 p.

Research output: Contribution to journalConference article

30 Scopus citations

Predicting oil recovery using percolation

King, P. R., Andrade, J. S., Buldyrev, S. V., Dokholyan, N., Lee, Y., Havlin, S. & Stanley, H. E., Apr 15 1999, In : Physica A: Statistical Mechanics and its Applications. 266, 1-4, p. 107-114 8 p.

Research output: Contribution to journalConference article

32 Scopus citations

Template-based approach for virtual-endoscopic navigation

Brady, M. L., Higgins, W. E. & Ramaswamy, K., Jan 1 1999, In : Proceedings of SPIE - The International Society for Optical Engineering. 3660, p. 241-256 16 p.

Research output: Contribution to journalConference article

Virtual bronchoscopic assessment of major airway obstructions

McLennan, G., Hoffman, E. A., Swift, R. D. & Higgins, W. E., Jan 1 1999, In : Proceedings of SPIE - The International Society for Optical Engineering. 3660, p. 313-320 8 p.

Research output: Contribution to journalConference article

3 Scopus citations
1998

Automatic axis generation for 3D virtual-bronchoscopic image assessment

Swift, R. D., Higgins, W. E., Hoffman, E. A., McLennan, G. & Reinhardt, J. M., Dec 1 1998, In : Proceedings of SPIE - The International Society for Optical Engineering. 3337, p. 73-84 12 p.

Research output: Contribution to journalConference article

9 Scopus citations

Coherence-based dynamic navigation for virtual endoscopy

Ramaswamy, K. & Higgins, W. E., Dec 1 1998, In : Proceedings of SPIE - The International Society for Optical Engineering. 3335, p. 410-426 17 p.

Research output: Contribution to journalConference article

5 Scopus citations
1997

Characterizing the performance of advanced rolling element materials

Mitchell, D. J., Sabia, R., Whitney, E. D. & Adair, J. H., Jan 1 1997, In : Ceramic Engineering and Science Proceedings. 18, 4 B, p. 85-92 8 p.

Research output: Contribution to journalConference article

5 Scopus citations

Effects of oil degradation on the friction and wear properties of silicon nitride/M-50 steel sliding couples

Sabia, R., Mitchell, D. & Adair, J. H., Jan 1 1997, In : Ceramic Engineering and Science Proceedings. 18, 3 A, p. 361-368 8 p.

Research output: Contribution to journalConference article

Improving electro-optic window reliability with DIACER™ coatings

Carasso, M. L., Adair, J. H., Demkowicz, P. A., Gilbert, D. G. & Singh, R. K., Dec 1 1997, In : Proceedings of SPIE - The International Society for Optical Engineering. 3060, p. 203-212 10 p.

Research output: Contribution to journalConference article

2 Scopus citations