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2020

Analysis of quasi-dynamic ordinary differential equations and the quasi-dynamic replicator

Griffin, C., Jiang, L. & Wu, R., Jan 1 2020, (Accepted/In press) In : Physica A: Statistical Mechanics and its Applications. 124422.

Research output: Contribution to journalArticle

A Robustified Posterior for Bayesian Inference on a Large Number of Parallel Effects

Liao, J. G., Berg, A. & McMurry, T. L., Jan 1 2020, (Accepted/In press) In : American Statistician.

Research output: Contribution to journalArticle

Open Access

Clinical and Genetic Factors Associated With Complications After Crohn's Ileocolectomy

Kline, B. P., Weaver, T., Brinton, D. L., Deiling, S., Yochum, G. S., Berg, A. S. & Koltun, W. A., Mar 1 2020, In : Diseases of the colon and rectum. 63, 3, p. 357-364 8 p.

Research output: Contribution to journalArticle

Connecting and Contrasting the Bayes Factor and a Modified ROPE Procedure for Testing Interval Null Hypotheses

Liao, J. G., Midya, V. & Berg, A., Jan 1 2020, (Accepted/In press) In : American Statistician.

Research output: Contribution to journalArticle

Development of a Novel Multi-Isoform ALDH Inhibitor Effective as an Antimelanoma Agent

Dinavahi, S. S., Gowda, R., Gowda, K., Bazewicz, C. G., Chirasani, V. R., Battu, M. B., Berg, A., Dokholyan, N. V., Amin, S. & Robertson, G. P., Feb 1 2020, In : Molecular cancer therapeutics. 19, 2, p. 447-459 13 p.

Research output: Contribution to journalArticle

Examining measurement reactivity in daily diary data on substance use: Results from a randomized experiment

Buu, A., Yang, S., Li, R., Zimmerman, M. A., Cunningham, R. M. & Walton, M. A., Mar 2020, In : Addictive Behaviors. 102, 106198.

Research output: Contribution to journalArticle

Genome-wide analysis of the NAC domain transcription factor gene family in Theobroma cacao

Shen, S., Zhang, Q., Shi, Y., Sun, Z., Zhang, Q., Hou, S., Wu, R., Jiang, L., Zhao, X. & Guo, Y., Jan 2020, In : Genes. 11, 1, 35.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Neighbourhood-level deprivation indices and postpartum women's health: Results from the Community Child Health Network (CCHN) multi-site study

Kaufman-Shriqui, V., O'Campo, P., Misir, V., Schafer, P., Morinis, J., Vance, M., Dunkel Schetter, C., Raju, T. N. K., Hillemeier, M. M., Lanzi, R. & Chinchilli, V. M., Feb 22 2020, In : Health and Quality of Life Outcomes. 18, 1, 38.

Research output: Contribution to journalArticle

Open Access

Post-Acute Kidney Injury Proteinuria and Subsequent Kidney Disease Progression: The Assessment, Serial Evaluation, and Subsequent Sequelae in Acute Kidney Injury (ASSESS-AKI) Study

Hsu, C. Y., Chinchilli, V. M., Coca, S., Devarajan, P., Ghahramani, N., Go, A. S., Hsu, R. K., Ikizler, T. A., Kaufman, J., Liu, K. D., Parikh, C. R., Reeves, W. B., Wurfel, M., Zappitelli, M., Kimmel, P. L. & Siew, E. D., Mar 2020, In : JAMA Internal Medicine. 180, 3, p. 402-410 9 p.

Research output: Contribution to journalArticle

Statistical Inference for High-Dimensional Models via Recursive Online-Score Estimation

Shi, C., Song, R., Lu, W. & Li, R., Jan 1 2020, (Accepted/In press) In : Journal of the American Statistical Association.

Research output: Contribution to journalArticle

Ultrahigh dimensional precision matrix estimation via refitted cross validation

Wang, L., Chen, Z., Wang, C. D. & Li, R., Mar 2020, In : Journal of Econometrics. 215, 1, p. 118-130 13 p.

Research output: Contribution to journalArticle

Open Access
2019

A Bayesian joint model of recurrent events and a terminal event

Li, Z., Chinchilli, V. M. & Wang, M., Jan 2019, In : Biometrical Journal. 61, 1, p. 187-202 16 p.

Research output: Contribution to journalArticle

1 Scopus citations

A computational framework to assess genome-wide distribution of polymorphic human endogenous retrovirus-k in human populations

Li, W., Lin, L., Malhotra, R., Yang, L., Acharya, R. & Poss, M., Mar 2019, In : PLoS computational biology. 15, 3, e1006564.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

A Computational Model for Inferring QTL Control Networks Underlying Developmental Covariation

Jiang, L., Shi, H., Sang, M., Zheng, C., Cao, Y., Zhu, X., Zhuo, X., Cheng, T., Zhang, Q., Wu, R. & Sun, L., Dec 18 2019, In : Frontiers in Plant Science. 10, 1557.

Research output: Contribution to journalArticle

Open Access

Adapting clinical trial design to maintain meaningful outcomes during a multicenter asthma trial in the precision medicine era

On behalf of the National Heart Lung and Blood Institute's “AsthmaNet”, Feb 2019, In : Contemporary Clinical Trials. 77, p. 98-103 6 p.

Research output: Contribution to journalArticle

1 Scopus citations

A dissection model for mapping complex traits

Sang, M., Shi, H., Wei, K., Ye, M., Jiang, L., Sun, L. & Wu, R., Mar 2019, In : Plant Journal. 97, 6, p. 1168-1182 15 p.

Research output: Contribution to journalArticle

A Drive to Driven Model of Mapping Intraspecific Interaction Networks

Jiang, L., Xu, J., Sang, M., Zhang, Y., Ye, M., Zhang, H., Wu, B., Zhu, Y., Xu, P., Tai, R., Zhao, Z., Jiang, Y., Dong, C., Sun, L., Griffin, C. H., Gragnoli, C. & Wu, R., Dec 20 2019, In : iScience. 22, p. 109-122 14 p.

Research output: Contribution to journalArticle

Open Access

An adaptive multivariate two-sample test with application to microbiome differential abundance analysis

Banerjee, K., Zhao, N., Srinivasan, A., Xue, L., Hicks, S. D., Middleton, F. A., Wu, R. & Zhan, X., Jan 1 2019, In : Frontiers in Genetics. 10, APR, 350.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations
Open Access

An omnidirectional visualization model of personalized gene regulatory networks

Chen, C., Jiang, L., Fu, G., Wang, M., Wang, Y., Shen, B., Liu, Z., Wang, Z., Hou, W., Berceli, S. A. & Wu, R., Jan 1 2019, In : NPJ systems biology and applications. 5, 1 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Association between DNA methylation in obesity-related genes and body mass index percentile in adolescents

He, F., Berg, A., Imamura Kawasawa, Y., Bixler, E. O., Fernandez-Mendoza, J., Whitsel, E. A. & Liao, D., Dec 1 2019, In : Scientific reports. 9, 1, 2079.

Research output: Contribution to journalArticle

7 Scopus citations
2 Scopus citations

A unified DNA sequence and non-DNA sequence mapping model of complex traits

Zeng, Y., Zhu, X., Chen, C., Banerjee, K., Sun, L., Yu, W., Zheng, B. & Wu, R., Jan 1 2019, In : Plant Journal. 99, 4, p. 784-795 12 p.

Research output: Contribution to journalArticle

Bayesian multidimensional scaling procedure with variable selection

Lin, L. & Fong, D. K. H., Jan 2019, In : Computational Statistics and Data Analysis. 129, p. 1-13 13 p.

Research output: Contribution to journalArticle

1 Scopus citations

Caloric Intake Relative to Total Daily Energy Expenditure Using a Spinal Cord Injury-Specific Correction Factor: An Analysis by Level of Injury

Farkas, G. J., Gorgey, A. S., Dolbow, D. R., Berg, A. S. & Gater, D. R., Nov 1 2019, In : American journal of physical medicine & rehabilitation. 98, 11, p. 947-952 6 p.

Research output: Contribution to journalArticle

Cardiovascular and Metabolic Risk in Women in the First Year Postpartum: Allostatic Load as a Function of Race, Ethnicity, and Poverty Status

Shalowitz, M. U., Schetter, C. D., Hillemeier, M. M., Chinchilli, V., Adam, E. K., Hobel, C. J., Ramey, S. L., Vance, M. R., O'Campo, P., Thorp, J. M., Seeman, T. E. & Raju, T. N. K., Jan 1 2019, In : American Journal of Perinatology. 36, 10, p. 1079-1089 11 p.

Research output: Contribution to journalArticle

4 Scopus citations

Changes in healthcare expenditures after the autism insurance mandate

Wang, L., Ma, J., Dholakia, R., Howells, C., Lu, Y., Chen, C., Li, R., Murray, M. & Leslie, D., Jan 2019, In : Research in Autism Spectrum Disorders. 57, p. 97-104 8 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Comparative transcriptome analysis identifies differentially expressed genes between normal and late-blooming Siberian apricot

Wang, Z., Song, S., Sheng, S., Tian, J., Wu, R. & Pang, X., Dec 1 2019, In : Journal of Forestry Research. 30, 6, p. 2277-2288 12 p.

Research output: Contribution to journalArticle

1 Scopus citations

Convergent horizontal gene transfer and cross-talk of mobile nucleic acids in parasitic plants

Yang, Z., Wafula, E. K., Kim, G., Shahid, S., McNeal, J. R., Ralph, P. E., Timilsena, P. R., Yu, W. B., Kelly, E. A., Zhang, H., Person, T. N., Altman, N. S., Axtell, M. J., Westwood, J. H. & dePamphilis, C. W., Sep 1 2019, In : Nature Plants. 5, 9, p. 991-1001 11 p.

Research output: Contribution to journalArticle

1 Scopus citations

Covariate Information Matrix for Sufficient Dimension Reduction

Yao, W., Nandy, D., Lindsay, B. G. & Chiaromonte, F., Oct 2 2019, In : Journal of the American Statistical Association. 114, 528, p. 1752-1764 13 p.

Research output: Contribution to journalArticle

Effect of Exercise on Breast Cancer-Related Lymphedema: What the Lymphatic Surgeon Needs to Know

Panchik, D., Masco, S., Zinnikas, P., Hillriegel, B., Lauder, T., Suttmann, E., Chinchilli, V., McBeth, M. & Hermann, W., Jan 1 2019, In : Journal of Reconstructive Microsurgery. 35, 1, p. 37-45 9 p.

Research output: Contribution to journalArticle

4 Scopus citations

Estimating the probability of abusive head trauma after abuse evaluation

for the Pediatric Brain Injury Research Network (PediBIRN) Investigators, Feb 2019, In : Child Abuse and Neglect. 88, p. 266-274 9 p.

Research output: Contribution to journalArticle

5 Scopus citations

Evidence for sharp increase in the economic damages of extreme natural disasters

Coronese, M., Lamperti, F., Keller, K., Chiaromonte, F. & Roventini, A., Oct 22 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 43, p. 21450-21455 6 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Exome Chip Meta-analysis Fine Maps Causal Variants and Elucidates the Genetic Architecture of Rare Coding Variants in Smoking and Alcohol Use

CHD Exome+ Consortium, Consortium for Genetics of Smoking Behaviour, Brazel, D. M., Jiang, Y., Hughey, J. M., Turcot, V., Zhan, X., Gong, J., Batini, C., Weissenkampen, J. D., Liu, M. Z., Surendran, P., Young, R., Barnes, D. R., Nielsen, S. F., Rasheed, A., Samuel, M., Zhao, W., Kontto, J., Perola, M. & 32 others, Caslake, M., de Craen, A. J. M., Trompet, S., Uria-Nickelsen, M., Malarstig, A., Reily, D. F., Hoek, M., Vogt, T., Jukema, J. W., Sattar, N., Ford, I., Packard, C. J., Alam, D. S., Majumder, A. A. S., Di Angelantonio, E., Chowdhury, R., Amouyel, P., Arveiler, D., Blankenberg, S., Ferrières, J., Kee, F., Kuulasmaa, K., Müller-Nurasyid, M., Veronesi, G., Virtamo, J., EPIC-CVD Consortium, C., Frossard, P., Nordestgaard, B. G., Saleheen, D., Danesh, J., Butterworth, A. S. & Liu, D., Jun 1 2019, In : Biological Psychiatry. 85, 11, p. 946-955 10 p.

Research output: Contribution to journalArticle

6 Scopus citations

Feature screening in ultrahigh-dimensional varying-coefficient Cox model

Yang, G., Zhang, L., Li, R. & Huang, Y., May 2019, In : Journal of Multivariate Analysis. 171, p. 284-297 14 p.

Research output: Contribution to journalArticle

Functional data analysis for computational biology

Cremona, M. A., Xu, H., Makova, K. D., Reimherr, M., Chiaromonte, F. & Madrigal, P., Sep 1 2019, In : Bioinformatics. 35, 17, p. 3211-3213 3 p.

Research output: Contribution to journalArticle

1 Scopus citations

Functional mapping of N deficiency-induced response in wheat yield-component traits by implementing high-throughput phenotyping

Jiang, L., Sun, L., Ye, M., Wang, J., Wang, Y., Bogard, M., Lacaze, X., Fournier, A., Beauchêne, K., Gouache, D. & Wu, R., Mar 2019, In : Plant Journal. 97, 6, p. 1105-1119 15 p.

Research output: Contribution to journalArticle

2 Scopus citations

Funmap2: An R package for QTL mapping using longitudinal phenotypes

Wang, N., Chu, T., Luo, J., Wu, R. & Wang, Z., Jan 1 2019, In : PeerJ. 2019, 5, e7008.

Research output: Contribution to journalArticle

Open Access

Glycated hemoglobin differences among blog-reading adults with type 1 diabetes compared with those who do not read blogs: Cross-sectional study

Oser, S. M., Stuckey, H. L., Parascando, J. A., McGinley, E. L., Berg, A. & Oser, T. K., Apr 2019, In : Journal of medical Internet research. 21, 4, e13634.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Hypothesis testing on linear structures of high-dimensional covariance matrix

Zheng, S., Chen, Z., Cui, H. & Li, R., Jan 1 2019, In : Annals of Statistics. 47, 6, p. 3300-3334 35 p.

Research output: Contribution to journalArticle

Identification of shoot differentiation-related genes in populus euphratica oliv.

Fu, Y., Dong, T., Tan, L., Yin, D., Zhang, M., Zhao, G., Ye, M. & Wu, R., Dec 2019, In : Genes. 10, 12, 1034.

Research output: Contribution to journalArticle

Open Access

Impact of AKI on urinary protein excretion: Analysis of two prospective cohorts

Hsu, C. Y., Hsu, R. K., Liu, K. D., Yang, J., Anderson, A., Chen, J., Chinchilli, V. M., Feldman, H. I., Garg, A. X., Hamm, L., Himmelfarb, J., Kaufman, J. S., Kusek, J. W., Parikh, C. R., Ricardo, A. C., Rosas, S. E., Saab, G., Sha, D., Siew, E. D., Sondheimer, J. & 3 others, Taliercio, J. J., Yang, W. & Go, A. S., Jul 2019, In : Journal of the American Society of Nephrology. 30, 7, p. 1271-1281 11 p.

Research output: Contribution to journalArticle

2 Scopus citations

Interrogation of internal workings in microbial community assembly: Play a game through a behavioral network?

Wang, Q., Liu, X., Jiang, L., Cao, Y., Zhan, X., Griffin, C. H. & Wu, R., Jan 1 2019, In : mSystems. 4, 5, e00550.

Research output: Contribution to journalArticle

Open Access

Linear hypothesis testing for high dimensional generalized linear models

Shi, C., Song, R., Chen, Z. & Li, R., Jan 1 2019, In : Annals of Statistics. 47, 5, p. 2671-2703 33 p.

Research output: Contribution to journalArticle

1 Scopus citations