Department of Biochemistry and Molecular Biology

  • United States

Research Output 1969 2019

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Conference article
2011

A case study in using ZFA and PATO for describing histological phenotypes in the larval zebrafish

Canada, B., Thomas, G., Cooper, T. & Cheng, K., Dec 1 2011, In : CEUR Workshop Proceedings. 833, 1 p.

Research output: Contribution to journalConference article

An ontology-based approach to linking model organisms and resources to human diseases

Mungall, C. J., Anderson, D., Bandrowski, A., Canada, B., Chatyr-Aryamontri, A., Cheng, K., Conn, P. M., Dolinski, K., Ellisman, M., Eppig, J., Grethe, J. S., Kemnitz, J., Iadonato, S., Larson, S. D., Magness, C., Martone, M. E., Tyers, M., Torniai, C., Troyanskaya, O., Turner, J. & 2 others, Westerfield, M. & Haendel, M. A., Dec 1 2011, In : CEUR Workshop Proceedings. 833, p. 263-265 3 p.

Research output: Contribution to journalConference article

Ontology
Gene expression
Animals
Genes

SHIRAZ and CABERNET: Leveraging automation, crowdsourcing, and ontologies to improve the accuracy and throughput of zebrafish histological phenotype annotations

Canada, B., Thomas, G., Schleicher, J., Wang, J. & Cheng, K., Dec 1 2011, In : CEUR Workshop Proceedings. 833, p. 288-289 2 p.

Research output: Contribution to journalConference article

Ontology
Automation
Genes
Throughput
Histology
2004

Stable, nanoscale glycosphingolipid films for use in sensing applications

Stine, R., Schengrund, C-L. & Pishko, M. V., Oct 26 2004, In : Materials Research Society Symposium - Proceedings. 823, p. 231-236 6 p.

Research output: Contribution to journalConference article

Glycosphingolipids
Lipids
lipids
Gold
gold
2002
18 Citations (Scopus)

Uncertainty in oil production predicted by percolation theory

King, P. R., Buldyrev, S. V., Dokholyan, N., Havlin, S., Lopez, E., Paul, G. & Stanley, H. E., Apr 1 2002, In : Physica A: Statistical Mechanics and its Applications. 306, p. 376-380 5 p.

Research output: Contribution to journalConference article

Percolation Theory
decision making
scaling laws
estimating
oils
1999
29 Citations (Scopus)

Applications of statistical physics to the oil industry: Predicting oil recovery using percolation theory

King, P. R., Buldyrev, S. V., Dokholyan, N., Havlin, S., Lee, Y., Paul, G. & Stanley, H. E., Dec 1 1999, In : Physica A: Statistical Mechanics and its Applications. 274, 1, p. 60-66 7 p.

Research output: Contribution to journalConference article

oil recovery
Percolation Theory
Statistical Physics
oil fields
Recovery
16 Citations (Scopus)

Distribution of shortest paths in percolation

Dokholyan, N., Buldyrev, S. V., Havlin, S., King, P. R., Lee, Y. & Stanley, H. E., Apr 15 1999, In : Physica A: Statistical Mechanics and its Applications. 266, 1-4, p. 55-61 7 p.

Research output: Contribution to journalConference article

Shortest path
Scaling
scaling
Distribution Function
distribution functions
6 Citations (Scopus)

Expansion of tandem repeats and oligomer clustering in coding and noncoding DNA sequences

Buldyrev, S. V., Dokholyan, N., Havlin, S., Stanley, H. E. & Stanley, R. H. R., Nov 1 1999, In : Physica A: Statistical Mechanics and its Applications. 273, 1-2, p. 19-32 14 p.

Research output: Contribution to journalConference article

oligomers
DNA Sequence
coding
deoxyribonucleic acid
Coding
31 Citations (Scopus)

Predicting oil recovery using percolation

King, P. R., Andrade, J. S., Buldyrev, S. V., Dokholyan, N., Lee, Y., Havlin, S. & Stanley, H. E., Apr 15 1999, In : Physica A: Statistical Mechanics and its Applications. 266, 1-4, p. 107-114 8 p.

Research output: Contribution to journalConference article

oil recovery
Recovery
Predict
Percolation Theory
direct numerical simulation