Research Output 1964 2019

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2018
3 Citations (Scopus)

Sphingolipids as Regulators of Autophagy and Endocytic Trafficking

Young, M. M. & Wang, H-G., Jan 1 2018, Advances in Cancer Research. Academic Press Inc., p. 27-60 34 p. (Advances in Cancer Research; vol. 140).

Research output: Chapter in Book/Report/Conference proceedingChapter

Sphingolipids
Autophagy
Neoplasms
Organelles
Ceramides
3 Citations (Scopus)

Targeting Sphingosine Kinases for the Treatment of Cancer

Lewis, C. S., Voelkel-Johnson, C. & Smith, C., Jan 1 2018, Advances in Cancer Research. Chalfant, C. E. & Fisher, P. B. (eds.). Academic Press Inc., p. 295-325 31 p. (Advances in Cancer Research; vol. 140).

Research output: Chapter in Book/Report/Conference proceedingChapter

Sphingolipids
Isoenzymes
Neoplasms
Inflammation
Therapeutics
2017

Calcium phosphate deposition in rat kidneys

Khan, S. R., Adair, J. H., Morrone, A. A. & Latorre, G. P., Jan 1 2017, Hydroxyapatite and Related Materials. CRC Press, p. 325-329 5 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Calcium phosphate
Rats
Calcium Oxalate
Apatite
Calcium
5 Citations (Scopus)

Computational protein design through grafting and stabilization

Zhu, C., Mowrey, D. D. & Dokholyan, N., Jan 1 2017, Methods in Molecular Biology. Humana Press Inc., p. 227-241 15 p. (Methods in Molecular Biology; vol. 1529).

Research output: Chapter in Book/Report/Conference proceedingChapter

Mutation
Proteins
Protein Stability
Software
Databases
2016

Amplifiers

Graziane, N. & Dong, Y., Oct 1 2016, Neuromethods. Humana Press Inc., p. 33-53 21 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Synaptic Transmission
Software
Noise
Electrodes
Light amplifiers

Bioinformatic and computational approaches for analysis of genomics data in neurotoxicology research

Gohlke, J. M., Freeman, W. M. & Vrana, K., Apr 19 2016, Neurotoxicology: Third Edition. CRC Press, p. 29-49 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Genomics
Computational Biology
Research
2 Citations (Scopus)

Cancer prevention with selenium costly lessons and difficult but bright future prospects

Lu, J., Jiang, C. & Zhang, J., Apr 19 2016, Inflammation, Oxidative Stress, and Cancer: Dietary Approaches for Cancer Prevention. CRC Press, p. 477-494 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Selenium
selenium
neoplasms
Neoplasms
1 Citation (Scopus)

Computational modeling of small molecule ligand binding interactions and affinities

Convertino, M. & Dokholyan, N., May 1 2016, Methods in Molecular Biology. Humana Press Inc., p. 23-32 10 p. (Methods in Molecular Biology; vol. 1414).

Research output: Chapter in Book/Report/Conference proceedingChapter

Ligands
Biological Phenomena
Preclinical Drug Evaluations
Propranolol
Adrenergic Receptors

Electrical theory

Graziane, N. & Dong, Y., Oct 1 2016, Neuromethods. Humana Press Inc., p. 17-31 15 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Clamping devices
Electrophysiology
Ions
Synapses
Axons

Extracellular and intracellular recordings

Graziane, N. & Dong, Y., Oct 1 2016, Neuromethods. Humana Press Inc., p. 3-15 13 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Electrophysiology
Neurons
Experiments
In Vitro Techniques

Fast and slow synaptic currents

Graziane, N. & Dong, Y., Jan 1 2016, Neuromethods. Humana Press Inc., p. 111-120 10 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Synapses
Kinetics
Gap Junctions
7 Citations (Scopus)

Gambogic acid and its role in chronic diseases

Pandey, M. K., Karelia, D. & Amin, S., Sep 1 2016, Advances in Experimental Medicine and Biology. Springer New York LLC, p. 375-395 21 p. (Advances in Experimental Medicine and Biology; vol. 928).

Research output: Chapter in Book/Report/Conference proceedingChapter

Spices
Chronic Disease
Garcinia
Ayurvedic Medicine
Dermatitis

Isolation of Synaptic Current

Graziane, N. & Dong, Y., Jan 1 2016, Neuromethods. Humana Press Inc., p. 101-110 10 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Synaptic Potentials

Kinetics of synaptic current

Graziane, N. & Dong, Y., Oct 1 2016, Neuromethods. Humana Press Inc., p. 193-205 13 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Neurotransmitter Agents
Permeability
Kinetics
Synaptic Transmission
Neuroglia

Long-term measurements

Graziane, N. & Dong, Y., Jan 1 2016, Neuromethods. Humana Press Inc., p. 145-156 12 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Long-Term Potentiation
Neurotransmitter Receptor
Electrophysiology
Noise

Measurement of a single synapse

Graziane, N. & Dong, Y., Oct 1 2016, Neuromethods. Humana Press Inc., p. 209-218 10 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Synapses
Microscopes
Visualization
Imaging techniques
Spine

Measuring kinetics of synaptic current

Graziane, N. & Dong, Y., Oct 1 2016, Neuromethods. Humana Press Inc., p. 121-131 11 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Neurotransmitter Receptor
Chemical activation
Kinetics
Neurotransmitter Agents
Sampling

Measuring presynaptic release probability

Graziane, N. & Dong, Y., Jan 1 2016, Neuromethods. Humana Press Inc., p. 133-143 11 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Membrane Potentials
Action Potentials
Neurons
Neurotransmitter Agents
Ions

Measuring reversal potentials

Graziane, N. & Dong, Y., Jan 1 2016, Neuromethods. Humana Press Inc., p. 157-162 6 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Ions
Membrane Potentials
Electric potential
Membranes
Direction compound

Patch pipettes (Micropipettes)

Graziane, N. & Dong, Y., Oct 1 2016, Neuromethods. Humana Press Inc., p. 69-78 10 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Electrophysiology
Fabrication
Tissue culture
Polishing
Joining

Perforated patch

Graziane, N. & Dong, Y., Oct 1 2016, Neuromethods. Humana Press Inc., p. 91-98 8 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Cell signaling
Phosphocreatine
Creatine
Clamping devices
Patch-Clamp Techniques
1 Citation (Scopus)

Pre vs. Post synaptic effect

Graziane, N. & Dong, Y., Oct 1 2016, Neuromethods. Humana Press Inc., p. 175-186 12 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Membranes
Neurons
Plasticity
Neuronal Plasticity
Excitatory Postsynaptic Potentials

Run-up and run-down

Graziane, N. & Dong, Y., Oct 1 2016, Neuromethods. Humana Press Inc., p. 187-192 6 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Ion Channels
Electrophysiology
Artifacts
Electric current measurement

Salt environment

Graziane, N. & Dong, Y., Oct 1 2016, Neuromethods. Humana Press Inc., p. 55-68 14 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Neurons
Salts
Electrophysiology
Brain
Experiments

Spatiotemporal effects of synaptic current

Graziane, N. & Dong, Y., Oct 1 2016, Neuromethods. Humana Press Inc., p. 79-89 11 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Neurons
Plasticity
Membranes
Dendritic Spines
Carisoprodol
5 Citations (Scopus)

Whole-Organism Cellular Pathology: A Systems Approach to Phenomics

Cheng, K., Katz, S. R., Lin, A. Y., Xin, X. & Ding, Y., Jan 1 2016, Genetics, Genomics and Fish Phenomics, 2016. Foulkes, N. S. & Foulkes, N. S. (eds.). Academic Press Inc., p. 89-115 27 p. (Advances in Genetics; vol. 95).

Research output: Chapter in Book/Report/Conference proceedingChapter

Systems Analysis
Pathology
Phenotype
Histology
Zebrafish
2015

Amplitude

Graziane, N. & Dong, Y., Jan 1 2015, Neuromethods. Humana Press Inc., p. 165-173 9 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Synaptic Potentials
Electrophysiology
Action Potentials
Cells
Population
5 Citations (Scopus)

Computational methods toward accurate RNA structure prediction using coarse-grained and all-atom models

Krokhotin, A. & Dokholyan, N., Jan 1 2015, Methods in Enzymology. Academic Press Inc., p. 65-89 25 p. (Methods in Enzymology; vol. 553).

Research output: Chapter in Book/Report/Conference proceedingChapter

Computational methods
RNA
Atoms
Nucleotides
Guide RNA

Dendritic patch

Graziane, N. & Dong, Y., Jan 1 2015, Neuromethods. Humana Press Inc., p. 225-231 7 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Dendrites
Ion Channels
Electric properties
Neurons
Synaptic Potentials

Electrophysiological and visual tags

Graziane, N. & Dong, Y., Jan 1 2015, Neuromethods. Humana Press Inc., p. 235-245 11 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Neurotransmitter Receptor
Neurons
Proteins

Electroporation in the developing mouse olfactory bulb

Imamura, F. & Greer, C. A., Mar 9 2015, Electroporation Methods in Neuroscience. Springer New York, p. 69-79 11 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Electroporation
Olfactory Bulb
Brain
Neurons
Automatic Data Processing

Extracellular recordings

Graziane, N. & Dong, Y., Jan 1 2015, Neuromethods. Humana Press Inc., p. 249-257 9 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Electrophysiology
Neurons
Networks (circuits)
Research

Measurement of silent synapses

Graziane, N. & Dong, Y., Jan 1 2015, Neuromethods. Humana Press Inc., p. 217-224 8 p. (Neuromethods; vol. 112).

Research output: Chapter in Book/Report/Conference proceedingChapter

Physiology
Synapses
Design of experiments
Research Design
2014
2 Citations (Scopus)

Capsaicin Mediated Oxidative Stress in Pancreatic Cancer

Datta, P., Pramanik, K., Mehrotra, S. & Srivastava, S. K., Jan 1 2014, Cancer: Oxidative Stress and Dietary Antioxidants. Elsevier Inc., p. 241-246 6 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Capsaicin
Pancreatic Neoplasms
Capsicum
Oxidative Stress
Reactive Oxygen Species

Prostate cancer: How helpful are natural agents for prevention?

Pandey, M. K., Kunnumakkara, A. B. & Amin, S., Dec 9 2014, Anticancer Properties of Fruits and Vegetables: A Scientific Review. World Scientific Publishing Co., p. 251-276 26 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Prostatic Neoplasms
2013
17 Citations (Scopus)

Current and future trials of targeted therapies in cutaneous melanoma

Evans, M., Madhunapantula, S. R. V., Robertson, G. & Drabick, J., Feb 15 2013, Impact of Genetic Targets on Cancer Therapy. El-Deiry, W. (ed.). p. 223-255 33 p. (Advances in Experimental Medicine and Biology; vol. 779).

Research output: Chapter in Book/Report/Conference proceedingChapter

Mitogen-Activated Protein Kinases
Melanoma
Skin
Cell proliferation
Drug Resistance
3 Citations (Scopus)

Drug Discovery in the Autophagy Pathways

Liu, B., Cheng, Y. & Yang, J-M., Aug 27 2013, Autophagy in Health and Disease. Elsevier Inc., p. 161-180 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Citations (Scopus)

Genomic strategies for the identification of dopamine receptor genes in zebrafish

Boehmler, W., Petko, J. A., Canfield, V. & Levenson, R., Jan 1 2013, Dopamine: Methods and Protocols. Humana Press Inc., p. 201-214 14 p. (Methods in Molecular Biology; vol. 964).

Research output: Chapter in Book/Report/Conference proceedingChapter

Dopamine Receptors
Zebrafish
Genes
Dopamine D2 Receptors
Complementary DNA
2 Citations (Scopus)

Medications and the Breastfeeding Mother

Berlin, C., Aug 27 2013, Clinical Pharmacology During Pregnancy. Elsevier Inc., p. 41-53 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Breast Feeding

Nonmelanoma Skin Cancers: Basal Cell and Squamous Cell Carcinomas

Wood, G. S., Xu, Y. G., Aylward, J. L., Spiegelman, V., Vanness, E., Teng, J. M. C. & Snow, S. N., Oct 22 2013, Abeloff's Clinical Oncology: Fifth Edition. Elsevier Inc., p. 1092-1111 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Skin Neoplasms
Squamous Cell Carcinoma

RNA three-dimensional structure determination using experimental constraints

Ding, F. & Dokholyan, N., Jan 1 2013, RNA Nanotechnology and Therapeutics. CRC Press, p. 159-175 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

RNA
Riboswitch
Drug Design
Proteins
Bacterial RNA
1 Citation (Scopus)

The cross talk between apoptosis and autophagy

Young, M. M. & Wang, H-G., Jan 1 2013, Autophagy and Cancer. Springer New York, p. 205-224 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Autophagy
Apoptosis
Proteins
Homeostasis
Cell Death
2 Citations (Scopus)

The role of adenosine in the ventral striatal circuits regulating behavioral activation and effort-related decision making: Importance for normal and pathological aspects of motivation

Salamone, J. D., Correa, M., Randall, P. A., Nunes, E. J., Pardo, M. & Lopez-Cruz, L., Nov 1 2013, Adenosine: A Key Link between Metabolism and Brain Activity. Springer New York, p. 493-512 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Corpus Striatum
Adenosine
Motivation
Dopamine
Decision Making
2012
13 Citations (Scopus)

Chemoprevention of Melanoma

Madhunapantula, S. R. V. & Robertson, G., Jan 1 2012, Advances in Pharmacology. Academic Press Inc., p. 361-398 38 p. (Advances in Pharmacology; vol. 65).

Research output: Chapter in Book/Report/Conference proceedingChapter

Sunscreening Agents
Chemoprevention
Melanoma
Nevus
Skin Neoplasms
2 Citations (Scopus)

D1/D5 Dopamine Agonists as Pharmacotherapy for Schizophrenia

Boyd, K. N. & Mailman, R. B., Jun 24 2012, Targets and Emerging Therapies for Schizophrenia. John Wiley and Sons, p. 51-84 34 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Drug therapy
Dopamine Agonists
37 Citations (Scopus)

Dopamine receptor signaling and current and future antipsychotic drugs

Boyd, K. N. & Mailman, R., 2012, Current Antipsychotics. Vol. 212. p. 53-86 34 p. (Handbook of Experimental Pharmacology; vol. 212).

Research output: Chapter in Book/Report/Conference proceedingChapter

Dopamine Receptors
Antipsychotic Agents
Dopamine D1 Receptors
Dopamine D2 Receptors
Pharmaceutical Preparations

Role of Ca2+-Mediated signaling in als pathology

Kotelnikova, E. A., Pyatnitskiy, M. A., Redler Rachel L., R. L. & Dokholyan, N., Dec 1 2012, From Knowledge Networks to Biological Models. Bentham Science Publishers Ltd., p. 24-72 49 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Pathology
Calcium
Transcription factors
Neurons
Transcription Factors
89 Citations (Scopus)

The complex molecular biology of Amyotrophic Lateral Sclerosis (ALS)

Redler, R. L. & Dokholyan, N., Jan 1 2012, Progress in Molecular Biology and Translational Science. Elsevier B.V., p. 215-262 48 p. (Progress in Molecular Biology and Translational Science; vol. 107).

Research output: Chapter in Book/Report/Conference proceedingChapter

Amyotrophic Lateral Sclerosis
Molecular Biology
Axonal Transport
Poisons
Nerve Growth Factors
2011
1 Citation (Scopus)

Gestational MAM (Methylazoxymethanol) administration: A promising animal model for psychosis onset

Le Pen, G., Bellon, A., Krebs, M. O. & Jay, T. M., Jul 1 2011, Animal Models of Schizophrenia and Related Disorders. O'Donnell, P. (ed.). p. 25-77 53 p. (Neuromethods; vol. 59).

Research output: Chapter in Book/Report/Conference proceedingChapter

Psychotic Disorders
Schizophrenia
Animals
Animal Models
Object recognition
6 Citations (Scopus)

Inhibition of Farnesyl and Geranylgeranyl Diphosphate Synthases

Holstein, S. A. & Hohl, R., Jan 1 2011, Enzymes. Academic Press, p. 301-319 19 p. (Enzymes; vol. 30).

Research output: Chapter in Book/Report/Conference proceedingChapter

Geranyltranstransferase
Farnesyltranstransferase
Protein Prenylation
Terpenes
Diphosphates