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Research Output 1949 2020

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2019

Commitment Isn't for Everyone

Josling, G. A. & Llinas, M., Jun 1 2019, In : Trends in Parasitology. 35, 6, p. 381-383 3 p.

Research output: Contribution to journalShort survey

Parasites
Culicidae
Malaria
Infection

Second to None: Plant Secondary siRNAs as Defensive Agents against Phytophthora

Axtell, M., Jan 9 2019, In : Cell Host and Microbe. 25, 1, p. 7-9 3 p.

Research output: Contribution to journalShort survey

Phytophthora
Small Interfering RNA
Proteins
2018
9 Citations (Scopus)

Impacts of genome-wide analyses on our understanding of human herpesvirus diversity and evolution

Renner, D. W. & Szpara, M. L., Jan 1 2018, In : Journal of virology. 92, 1, e00908-17.

Research output: Contribution to journalShort survey

Herpesviridae
Genome
genome
DNA Viruses
dsDNA viruses
1 Citation (Scopus)

Mirrors made of a single atomic layer

Mak, K. F. & Shan, J., Apr 9 2018, In : Nature. 556, 7700, p. 177-178 2 p.

Research output: Contribution to journalShort survey

4 Citations (Scopus)

Points of significance: Machine learning: Supervised methods

Bzdok, D., Krzywinski, M. & Altman, N. S., Jan 3 2018, In : Nature methods. 15, 1, p. 5-6 2 p.

Research output: Contribution to journalShort survey

Learning systems
Supervised Machine Learning
38 Citations (Scopus)

Points of Significance: Statistics versus machine learning

Bzdok, D., Altman, N. S. & Krzywinski, M., Apr 3 2018, In : Nature methods. 15, 4, p. 233-234 2 p.

Research output: Contribution to journalShort survey

Statistical Data Interpretation
Genetic Models
Gene Expression Regulation
Machine Learning
6 Citations (Scopus)

The curse(s) of dimensionality this-month

Altman, N. S. & Krzywinski, M., Jun 1 2018, In : Nature methods. 15, 6, p. 399-400 2 p.

Research output: Contribution to journalShort survey

Statistical Data Interpretation
Research Design
2017
3 Citations (Scopus)

Applied physics: Optical sensing gets exceptional

Rechtsman, M. C., Aug 9 2017, In : Nature. 548, 7666, p. 161-162 2 p.

Research output: Contribution to journalShort survey

Physics

Biocontrol: Crown-of-thorns no more

Medina, M., Apr 13 2017, In : Nature. 544, 7649, p. 168-170 3 p.

Research output: Contribution to journalShort survey

8 Citations (Scopus)

Classification and regression trees

Krzywinski, M. & Altman, N. S., Jul 28 2017, In : Nature Methods. 14, 8, p. 757-758 2 p.

Research output: Contribution to journalShort survey

30 Citations (Scopus)

Condensed-matter physics: Magnetism in flatland

Samarth, N., Jun 7 2017, In : Nature. 546, 7657, p. 216-218 3 p.

Research output: Contribution to journalShort survey

Physical Phenomena
physical phenomena
Physics
geomagnetism
geomagnetic field

Gravitational waves: History of black holes revealed by their spin

Sigurdsson, S., Aug 23 2017, In : Nature. 548, 7668, p. 397-398 2 p.

Research output: Contribution to journalShort survey

1 Citation (Scopus)

Less Lipid, More Commitment

Llinas, M., Dec 14 2017, In : Cell. 171, 7, p. 1474-1476 3 p.

Research output: Contribution to journalShort survey

Sex Differentiation
Lysophosphatidylcholines
Malaria
Parasites
Lipids
4 Citations (Scopus)

Lost in translation? microRNAs at the rough ER

Axtell, M., Apr 1 2017, In : Trends in Plant Science. 22, 4, p. 273-274 2 p.

Research output: Contribution to journalShort survey

rough endoplasmic reticulum
microRNA
translation (genetics)
Arabidopsis
RNA
12 Citations (Scopus)

Points of Significance: Ensemble methods: Bagging and random forests

Altman, N. S. & Krzywinski, M., Oct 1 2017, In : Nature methods. 14, 10, p. 933-934 2 p.

Research output: Contribution to journalShort survey

Forests
9 Citations (Scopus)

Points of Significance: Machine learning: A primer

Bzdok, D., Krzywinski, M. & Altman, N. S., Dec 1 2017, In : Nature methods. 14, 12, p. 1119-1120 2 p.

Research output: Contribution to journalShort survey

Learning systems
Hormones
10 Citations (Scopus)

Points of Significance: Interpreting P values

Altman, N. S. & Krzywinski, M., Feb 28 2017, In : Nature methods. 14, 3, p. 213-214 2 p.

Research output: Contribution to journalShort survey

19 Citations (Scopus)

Points of Significance: Clustering

Altman, N. S. & Krzywinski, M., May 30 2017, In : Nature methods. 14, 6, p. 545-546 2 p.

Research output: Contribution to journalShort survey

Cluster Analysis
2 Citations (Scopus)

Tooth Be Told, Genetics Influences Oral Microbiome

Davenport, E., Sep 13 2017, In : Cell Host and Microbe. 22, 3, p. 251-253 3 p.

Research output: Contribution to journalShort survey

Open Access
Microbiota
Oral Health
Tooth
Bacteria
Health
2016
12 Citations (Scopus)

Biophysical and computational methods to analyze amino acid interaction networks in proteins

O'Rourke, K. F., Gorman, S. D. & Boehr, D. D., Jan 1 2016, In : Computational and Structural Biotechnology Journal. 14, p. 245-251 7 p.

Research output: Contribution to journalShort survey

Protein Interaction Maps
Computational methods
Amino acids
Proteins
Amino Acids
5 Citations (Scopus)

Microrobotics: Swimmers by design

Aronson, I., Mar 16 2016, In : Nature. 531, 7594, p. 312-313 2 p.

Research output: Contribution to journalShort survey

Robotics
robotics
Magnetic Fields
design method
science and technology
22 Citations (Scopus)

Points of significance: P values and the search for significance

Altman, N. S. & Krzywinski, M., Dec 29 2016, In : Nature methods. 14, 1, p. 3-4 2 p.

Research output: Contribution to journalShort survey

37 Citations (Scopus)

Points of Significance: Classification evaluation

Lever, J., Krzywinski, M. & Altman, N. S., Jul 28 2016, In : Nature methods. 13, 8, p. 603-604 2 p.

Research output: Contribution to journalShort survey

19 Citations (Scopus)

Points of Significance: Analyzing outliers: Influential or nuisance?

Altman, N. S. & Krzywinski, M., Mar 30 2016, In : Nature Methods. 13, 4, p. 281-282 2 p.

Research output: Contribution to journalShort survey

Biological Models
Statistical Data Interpretation
Statistical Models
Regression analysis
Computer Simulation
65 Citations (Scopus)

Points of Significance: Model selection and overfitting

Lever, J., Krzywinski, M. & Altman, N. S., Aug 30 2016, In : Nature Methods. 13, 9, p. 703-704 2 p.

Research output: Contribution to journalShort survey

2 Citations (Scopus)

Self-propelled motors: Light-seeking synthetic trees

Sen, A., Dec 1 2016, In : Nature nanotechnology. 11, 12, p. 1003-1004 2 p.

Research output: Contribution to journalShort survey

nanotechnology
Nanotechnology
Nanostructures

Structural biology: A picornavirus unlike the others

Hafenstein, S., Oct 26 2016, In : Nature Microbiology. 1, 11, 16217.

Research output: Contribution to journalShort survey

Picornaviridae
40 Citations (Scopus)

The role of biology in planetary evolution: Cyanobacterial primary production in low-oxygen Proterozoic oceans

Hamilton, T. L., Bryant, D. A. & Macalady, J., Feb 1 2016, In : Environmental microbiology. 18, 2, p. 325-340 16 p.

Research output: Contribution to journalShort survey

Planetary Evolution
planetary evolution
Photosynthesis
Cyanobacteria
Oceans and Seas
2015
3 Citations (Scopus)

(Loop) quantum gravity and the inflationary scenario

Bojowald, M., Jan 1 2015, In : Comptes Rendus Physique. 16, 10, p. 1012-1017 6 p.

Research output: Contribution to journalShort survey

gravitation
universe
time measurement
curvature
predictions
5 Citations (Scopus)

A unifying experimental design for dissecting tree genomes

Sun, L., Zhu, X., Zhang, Q. & Wu, R., Aug 1 2015, In : Trends in Plant Science. 20, 8, p. 473-476 4 p.

Research output: Contribution to journalShort survey

chromosome mapping
experimental design
genome
quantitative genetics
forest trees
1 Citation (Scopus)

Evolution: A genomic guide to bird population history

Toews, D., Jun 1 2015, In : Current Biology. 25, 11, p. R465-R467

Research output: Contribution to journalShort survey

Open Access
Population Growth
Birds
global change
oscillation
population growth

Motor control summer school: The first ten years

Latash, M., Jan 1 2015, In : Motor Control. 19, 2, p. 105-107 3 p.

Research output: Contribution to journalShort survey

18 Citations (Scopus)

Points of Significance: Bayes' theorem

Puga, J. L., Krzywinski, M. & Altman, N. S., Jan 1 2015, In : Nature Methods. 12, 4, p. 277-278 2 p.

Research output: Contribution to journalShort survey

Biomarkers
3 Citations (Scopus)

STEM and EELS investigation on black phosphorus at atomic resolution

Nicotra, G., Mio, A. M., Cupolillo, A., Hu, J., Wei, J., Mao, Z., Deretzis, I., Politano, A. & Spinella, C., Jan 1 2015, In : Microscopy and Microanalysis. 21, p. 427-428 2 p.

Research output: Contribution to journalShort survey

Open Access
Electron energy loss spectroscopy
phosphorus
Phosphorus

The wonder of RNA: A personal reflection of the last 20 years

Bevilacqua, P. C., Apr 1 2015, In : RNA. 21, 4, p. 515-516 2 p.

Research output: Contribution to journalShort survey

Narration
RNA Folding
Nucleic Acid Conformation
RNA Interference
RNA
2014
34 Citations (Scopus)

Analysis pipeline for the epistasis search - statistical versus biological filtering

Sun, X., Lu, Q., Mukheerjee, S., Crane, P. K., Elston, R. & Ritchie, M. D., Jan 1 2014, In : Frontiers in Genetics. 5, APR, Article 106.

Research output: Contribution to journalShort survey

Genes
Gene Ontology
Proteins
Metabolic Networks and Pathways
Quality Control
14 Citations (Scopus)

Comparing samples-part i

Krzywinski, M. & Altman, N. S., Jan 1 2014, In : Nature Methods. 11, 3, p. 215-216 2 p.

Research output: Contribution to journalShort survey

Drug therapy
Statistical Data Interpretation
49 Citations (Scopus)

Points of significance: Replication

Blainey, P., Krzywinski, M. & Altman, N. S., Sep 1 2014, In : Nature Methods. 11, 9, p. 879-880 2 p.

Research output: Contribution to journalShort survey

Animals
RNA
Computer simulation
Statistical Data Interpretation
Statistical Models
10 Citations (Scopus)

Points of significance: Sources of variation

Altman, N. S. & Krzywinski, M., Jan 1 2014, In : Nature methods. 12, 1, p. 5-6 2 p.

Research output: Contribution to journalShort survey

Reproducibility of Results
Uncertainty
10 Citations (Scopus)

Points of Significance: Two-factor designs

Krzywinski, M. & Altman, N. S., Jan 1 2014, In : Nature Methods. 11, 12, p. 1187-1188 2 p.

Research output: Contribution to journalShort survey

Analysis of variance (ANOVA)
Statistical Data Interpretation
Statistical Models
27 Citations (Scopus)

Resolving nonstop translation complexes is a matter of life or death

Keiler, K. C. & Feaga, H. A., Jan 1 2014, In : Journal of bacteriology. 196, 12, p. 2123-2130 8 p.

Research output: Contribution to journalShort survey

Ribosomes
Messenger RNA
Transfer RNA
Bacteria
Terminator Codon
2013
31 Citations (Scopus)

Collective behavior in out-of-equilibrium colloidal suspensions

Aronson, I., Jan 1 2013, In : Comptes Rendus Physique. 14, 6, p. 518-527 10 p.

Research output: Contribution to journalShort survey

colloids
self assembly
healing
thermodynamic equilibrium
nanotechnology
2 Citations (Scopus)

Gravitational waves and astrophysical sources

Sathyaprakash, B. S., Apr 1 2013, In : Comptes Rendus Physique. 14, 4, p. 272-287 16 p.

Research output: Contribution to journalShort survey

gravitational waves
astrophysics
relativity
quadrupoles
pulsars
9 Citations (Scopus)

GWAS to therapy by genome edits?

Hardison, R. C. & Blobel, G. A., Jan 1 2013, In : Science. 342, 6155, p. 206-207 2 p.

Research output: Contribution to journalShort survey

Genome-Wide Association Study
Epigenomics
Hemoglobins
Genome
Genes
11 Citations (Scopus)

How was early Earth kept warm?

Kasting, J., Jan 4 2013, In : Science. 339, 6115, p. 44-45 2 p.

Research output: Contribution to journalShort survey

Hydrogen
10 Citations (Scopus)

Inorganic protocells: Gated access to microreactors

Keating, C. D., Jun 1 2013, In : Nature Chemistry. 5, 6, p. 449-451 3 p.

Research output: Contribution to journalShort survey

Inorganic Chemicals
Inorganic chemicals
Static electricity
Cell Membrane Permeability
Artificial Cells
2 Citations (Scopus)

Molecular biology: The ends justify the means

Pugh, B. F., Apr 26 2013, In : Nature. 497, 7447, p. 48-49 2 p.

Research output: Contribution to journalShort survey

Fungal RNA
Genetic Transcription
Alternative Splicing
genetic analysis
Gene Expression Profiling
177 Citations (Scopus)

Post-transcriptional regulation on a global scale: Form and function of Csr/Rsm systems

Romeo, T., Vakulskas, C. A. & Babitzke, P. L., Feb 1 2013, In : Environmental microbiology. 15, 2, p. 313-324 12 p.

Research output: Contribution to journalShort survey

Small Untranslated RNA
RNA
protein
Escherichia coli
Molecular Mimicry
92 Citations (Scopus)

Reactive intermediates in cytochrome P450 catalysis

Krest, C. M., Onderko, E. L., Yosca, T. H., Calixto, J. C., Karp, R. F., Livada, J., Rittle, J. & Green, M. T., Jun 14 2013, In : Journal of Biological Chemistry. 288, 24, p. 17074-17081 8 p.

Research output: Contribution to journalShort survey

Catalysis
Cytochrome P-450 Enzyme System
Hydroxylation
Peroxynitrous Acid
Photolysis

XA Cluster to remember

Blobel, G. A. & Hardison, R. C., Aug 15 2013, In : Cell. 154, 4

Research output: Contribution to journalShort survey

Mitosis
Statistical Factor Analysis
Cell Cycle
Transcription Factors
Cells