Institute for Computational and Data Sciences (ICDS)

  • United States

Research Output

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2019

Horse Paleogenomes and Human–Animal Interactions in Prehistory

Perry, G. H. & Makarewicz, C. A., Jul 2019, In : Trends in Genetics. 35, 7, p. 473-475 3 p.

Research output: Contribution to journalShort survey

1 Scopus citations

Kinetics of Li-Mediated N 2 Electroreduction

Maheshwari, S. & Janik, M. J., Apr 17 2019, In : Joule. 3, 4, p. 915-916 2 p.

Research output: Contribution to journalShort survey

1 Scopus citations
2018

Impacts of genome-wide analyses on our understanding of human herpesvirus diversity and evolution

Renner, D. W. & Szpara, M. L., Jan 1 2018, In : Journal of virology. 92, 1, e00908-17.

Research output: Contribution to journalShort survey

13 Scopus citations

On the presence of surface bound hydroxyl species on polycrystalline Pt electrodes in the “hydrogen potential region” (0–0.4 V-RHE)

Janik, M. J., McCrum, I. T. & Koper, M. T. M., Nov 2018, In : Journal of Catalysis. 367, p. 332-337 6 p.

Research output: Contribution to journalShort survey

6 Scopus citations
2017

Cybersecurity

Waters, B., Boneh, D., Aldeman, L., McDaniel, P. & Van Oorschot, P., Apr 2017, In : Communications of the ACM. 60, 4, p. 20-21 2 p.

Research output: Contribution to journalShort survey

1 Scopus citations

Future of circulating tumor cells in the melanoma clinical and research laboratory settings

De Souza, L. M., Robertson, B. M. & Robertson, G. P., Apr 28 2017, In : Cancer Letters. 392, p. 60-70 11 p.

Research output: Contribution to journalShort survey

12 Scopus citations
2016

Metabolic modeling of clostridia: Current developments and applications

Dash, S., Ng, C. Y. & Maranas, C. D., Jan 21 2016, In : FEMS Microbiology Letters. 363, 4, fnw004.

Research output: Contribution to journalShort survey

28 Scopus citations

The role of biology in planetary evolution: Cyanobacterial primary production in low-oxygen Proterozoic oceans

Hamilton, T. L., Bryant, D. A. & Macalady, J. L., Feb 1 2016, In : Environmental microbiology. 18, 2, p. 325-340 16 p.

Research output: Contribution to journalShort survey

45 Scopus citations
2015

Aging Gracefully: A New Model of Microtubule Growth and Catastrophe

Hancock, W. O., Dec 15 2015, In : Biophysical journal. 109, 12, p. 2449-2451 3 p.

Research output: Contribution to journalShort survey

Modelling hysteresis in vanadium dioxide oscillators

Maffezzoni, P., Daniel, L., Shukla, N., Datta, S., Raychowdhury, A. & Narayanan, V., May 28 2015, In : Electronics Letters. 51, 11, p. 819-820 2 p.

Research output: Contribution to journalShort survey

2 Scopus citations

Personalized Kinetic Models for Predictive Healthcare

Chowdhury, A. & Maranas, C. D., Oct 28 2015, In : Cell Systems. 1, 4, p. 250-251 2 p.

Research output: Contribution to journalShort survey

2014

CRISPRs: Molecular Signatures Used for Pathogen Subtyping

Shariat, N. & Dudley, E. G., Jan 1 2014, In : Applied and environmental microbiology. 80, 2, p. 430-439 10 p.

Research output: Contribution to journalShort survey

70 Scopus citations

Mitotic kinesins: A reason to delve into kinesin-12

Hancock, W. O., Oct 6 2014, In : Current Biology. 24, 19, p. R968-R970

Research output: Contribution to journalShort survey

6 Scopus citations
2013

GWAS to therapy by genome edits?

Hardison, R. C. & Blobel, G. A., Jan 1 2013, In : Science. 342, 6155, p. 206-207 2 p.

Research output: Contribution to journalShort survey

10 Scopus citations

XA Cluster to remember

Blobel, G. A. & Hardison, R. C., Aug 15 2013, In : Cell. 154, 4, p. X718-720

Research output: Contribution to journalShort survey

2012

Cytoskeletal organization: Whirling to the beat

Hancock, W. O., Jun 19 2012, In : Current Biology. 22, 12, p. R493-R495

Research output: Contribution to journalShort survey

1 Scopus citations

Designing a road map for geoscience workflows

Duffy, C., Gil, Y., Deelman, E., Marru, S., Pierce, M., Demir, I. & Wiener, G., Jan 1 2012, In : Eos. 93, 24, p. 225-226 2 p.

Research output: Contribution to journalShort survey

4 Scopus citations

Enzymes: Orchestrating hi-fi annotations

Suthers, P. & Maranas, C. D., Dec 4 2012, In : Nature Chemical Biology. 8, 10, p. 810-811 2 p.

Research output: Contribution to journalShort survey

Genome-wide epigenetic data facilitate understanding of disease susceptibility association studies

Hardison, R. C., Sep 7 2012, In : Journal of Biological Chemistry. 287, 37, p. 30932-30940 9 p.

Research output: Contribution to journalShort survey

30 Scopus citations

Mathematical optimization applications in metabolic networks

Zomorrodi, A. R., Suthers, P. F., Ranganathan, S. & Maranas, C. D., Nov 1 2012, In : Metabolic engineering. 14, 6, p. 672-686 15 p.

Research output: Contribution to journalShort survey

93 Scopus citations

Thinking about place, spatial behavior, and spatial processes in childhood obesity

Matthews, S. A., May 2012, In : American Journal of Preventive Medicine. 42, 5, p. 516-520 5 p.

Research output: Contribution to journalShort survey

13 Scopus citations
2011

Physical activities and future risk of Parkinson's disease

Xu, Q., Park, Y., Huang, X. & Chen, H., Jul 5 2011, In : Focus on Parkinson's Disease. 22, 1, p. 19-21 3 p.

Research output: Contribution to journalShort survey

Smoking duration, intensity, and risk of Parkinson's disease

Chen, H., Huang, X. & Guo, X., Jul 5 2011, In : Focus on Parkinson's Disease. 22, 1, p. 16-18 3 p.

Research output: Contribution to journalShort survey

2010

Advances in biofilm reactors for production of value-added products

Cheng, K. C., Demirci, A. & Catchmark, J. M., Jun 2010, In : Applied Microbiology and Biotechnology. 87, 2, p. 445-456 12 p.

Research output: Contribution to journalShort survey

81 Scopus citations

Genome sequence of a cellulose-producing bacterium, Gluconacetobacter hansenii ATCC 23769

Iyer, P. R., Geib, S. M., Catchmark, J., Kao, T. H. & Tien, M., Aug 1 2010, In : Journal of bacteriology. 192, 16, p. 4256-4257 2 p.

Research output: Contribution to journalShort survey

40 Scopus citations
2009

Nanotechnology: Soggy origami

Crespi, V. H., Dec 17 2009, In : Nature. 462, 7275, p. 858-859 2 p.

Research output: Contribution to journalShort survey

6 Scopus citations

Sharing data between LSDBs and central repositories

Dunnen, J. T. D., Sijmons, R. H., Andersen, P. S., Vihinen, M., Beckmann, J. S., Rossetti, S., Talbot, C. C., Hardison, R. C., Povey, S. & Cotton, R. G. H., Apr 1 2009, In : Human mutation. 30, 4, p. 493-495 3 p.

Research output: Contribution to journalShort survey

15 Scopus citations
2008

Intracellular Transport: Kinesins Working Together

Hancock, W. O., Aug 26 2008, In : Current Biology. 18, 16, p. R715-R717

Research output: Contribution to journalShort survey

11 Scopus citations

Reopening the black box of war: War and domestic politics

Gartner, S. S., Jun 1 2008, In : Conflict Management and Peace Science. 25, 2, p. 95-97 3 p.

Research output: Contribution to journalShort survey

2 Scopus citations

The molecular biology and evolution of feline immunodeficiency viruses of cougars

Poss, M., Ross, H., Rodrigo, A., Terwee, J., VandeWoude, S. & Biek, R., May 15 2008, In : Veterinary Immunology and Immunopathology. 123, 1-2, p. 154-158 5 p.

Research output: Contribution to journalShort survey

5 Scopus citations
2007

Climate change: The limits of consensus

Oppenheimer, M., O'Neill, B. C., Webster, M. & Agrawala, S., Sep 14 2007, In : Science. 317, 5844, p. 1505-1506 2 p.

Research output: Contribution to journalShort survey

117 Scopus citations

Shaping specificity in signaling networks

Albert, R. Z. & Oltvai, Z. N., Mar 1 2007, In : Nature Genetics. 39, 3, p. 286-287 2 p.

Research output: Contribution to journalShort survey

9 Scopus citations
2006

Current understanding of the genetic diversity of Mycobacterium avium subsp. paratuberculosis

Motiwala, A. S., Li, L., Kapur, V. & Sreevatsan, S., Apr 1 2006, In : Microbes and Infection. 8, 5, p. 1406-1418 13 p.

Research output: Contribution to journalShort survey

56 Scopus citations

Earth science: Megathrust investigations

Ammon, C. J., Mar 2 2006, In : Nature. 440, 7080, p. 31-32 2 p.

Research output: Contribution to journalShort survey

5 Scopus citations

Functionality of unspliced XBP1 is required to explain evolution of overlapping reading frames

Nekrutenko, A. & He, J., Dec 1 2006, In : Trends in Genetics. 22, 12, p. 645-648 4 p.

Research output: Contribution to journalShort survey

22 Scopus citations

Pathogenesis of enteroaggregative Escherichia coli infection

Harrington, S. M., Dudley, E. G. & Nataro, J. P., Jan 1 2006, In : FEMS Microbiology Letters. 254, 1, p. 12-18 7 p.

Research output: Contribution to journalShort survey

162 Scopus citations

Quantum gravity: Physics from geometry

Ashtekar, A., Nov 2006, In : Nature Physics. 2, 11, p. 725-726 2 p.

Research output: Contribution to journalShort survey

5 Scopus citations
2005

Free expansion of impenetrable bosons on one-dimensional optical lattices

Rigol, M. & Muramatsu, A., Aug 10 2005, In : Modern Physics Letters B. 19, 18, p. 861-881 21 p.

Research output: Contribution to journalShort survey

56 Scopus citations

Postfire soil N cycling in northern conifer forests affected by severe, stand-replacing wildfires

Smithwick, E. A. H., Turner, M. G., Mack, M. C. & Chapin, F. S., Mar 1 2005, In : Ecosystems. 8, 2, p. 163-181 19 p.

Research output: Contribution to journalShort survey

130 Scopus citations

Sexually transmitted diseases: Epidemic cycling and immunity

Grenfell, B. & Bjornstad, O. N., Jan 27 2005, In : Nature. 433, 7024, p. 366-367 2 p.

Research output: Contribution to journalShort survey

27 Scopus citations
2004

A step up to self-assembly

Fichthorn, K. A. & Scheffler, M., Jun 10 2004, In : Nature. 429, 6992, p. 617-618 2 p.

Research output: Contribution to journalShort survey

21 Scopus citations

Mountain hares, louping-ill, red grouse and harvesting: Complex interactions but few data

Laurenson, M. K., Norman, R. A., Gilbert, L., Reid, H. W. & Hudson, P. J., Jul 1 2004, In : Journal of Animal Ecology. 73, 4, p. 811-813 3 p.

Research output: Contribution to journalShort survey

8 Scopus citations

Prototype pbo instrumentation of calipso project captures world-record lava dome collapse on montserrat volcano

Mattiou, G. S., Young, S. R., Voight, B., Steven, R., Sparks, J., Shalev, E., Sacks, S., Malin, P., Linde, A., Johnston, W., Hidayat, D., Elsworth, D., Dunkley, P., Herd, R., Neuberg, J., Norton, G. & Widiwijayanti, C., Aug 24 2004, In : Eos. 85, 34

Research output: Contribution to journalShort survey

15 Scopus citations

The great train crash of 1868

Hume, R. D., Dec 1 2004, In : History Today. 54, 7, p. 44-45 2 p.

Research output: Contribution to journalShort survey

2001

Climate change: Uncertainty and climate change assessments

Reilly, J., Stone, P. H., Forest, C., Webster, M. D., Jacoby, H. D. & Prinn, R. G., Jul 20 2001, In : Science. 293, 5529

Research output: Contribution to journalShort survey

124 Scopus citations

Transposable elements are found in a large number of human protein-coding genes

Nekrutenko, A. & Li, W. H., Nov 1 2001, In : Trends in Genetics. 17, 11, p. 619-621 3 p.

Research output: Contribution to journalShort survey

307 Scopus citations
2000

Adaptive electric field control of epileptic seizures

Gluckman, B., Nguyen, H. & Schiff, S., Dec 1 2000, In : Acta Neurologica Scandinavica, Supplement. 102, 175, p. 44-45 2 p.

Research output: Contribution to journalShort survey

A phase transition between localist and distributed representation

Molenaar, P. & Raijmakers, M. E. J., Jan 1 2000, In : Behavioral and Brain Sciences. 23, 4, 1 p.

Research output: Contribution to journalShort survey

1 Scopus citations

Conserved noncoding sequences are reliable guides to regulatory elements

Hardison, R. C., Sep 1 2000, In : Trends in Genetics. 16, 9, p. 369-372 4 p.

Research output: Contribution to journalShort survey

331 Scopus citations

Neural constructivism or self-organization?

Molenaar, P. C. M. & Van der Maas, H. L. J., Dec 1 2000, In : Behavioral and Brain Sciences. 23, 5, p. 783-784 2 p.

Research output: Contribution to journalShort survey