Research Output 1955 2020

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2020

Adiponectin is secreted by theca layer cells isolated from chicken ovarian follicles

Hadley, J. A., Ocón-Grove, O. & Ramachandran, R., Jan 1 2020, In : Reproduction. 159, 3, p. 275-288 14 p.

Research output: Contribution to journalArticle

Theca Cells
Ovarian Follicle
Adiponectin
Chickens
Adiponectin Receptors

A master regulator of bacteroides thetaiotaomicron gut colonization controls carbohydrate utilization and an alternative protein synthesis factor

Townsend, G. E., Han, W., Schwalm, N. D., Hong, X., Bencivenga-Barry, N. A., Goodman, A. L. & Groisman, E. A., Jan 1 2020, In : mBio. 11, 1, e03221-19.

Research output: Contribution to journalArticle

Open Access
Dietary Fiber
Carbohydrates
Bacteroides
Food
Genes
Open Access
Persea
Randomized Controlled Trials
Obesity
Antioxidants
Fats
Parity
Breast
Clone Cells
Breast Neoplasms
Carcinogenesis

An Efficient Synthesis of Dibenzo[a,l]tetracene and Dibenzo[a,j]tetracene and Their Identification in a Coal Tar Extract

Ramisetti, S. R., Oña-Ruales, J. O., Wise, S. A., Amin, S. & Sharma, A. K., Jan 1 2020, In : Polycyclic Aromatic Compounds. 40, 1, p. 88-98 11 p.

Research output: Contribution to journalArticle

Coal Tar
Coal tar
Aromatization
Polycyclic Aromatic Hydrocarbons
Liquid chromatography

A phase 1 trial of everolimus and bevacizumab in children with recurrent solid tumors

Santana, V. M., Sahr, N., Tatevossian, R. G., Jia, S., Campagne, O., Sykes, A., Stewart, C. F., Furman, W. L. & McGregor, L. M., Jan 1 2020, (Accepted/In press) In : Cancer.

Research output: Contribution to journalArticle

Neoplasms
Sirolimus
Maximum Tolerated Dose
Blood Cells
Bevacizumab
Robots
Information science
Computer science
Statistical methods
Robotics

A Robustified Posterior for Bayesian Inference on a Large Number of Parallel Effects

Liao, J. G., Berg, A. & McMurry, T. L., Jan 1 2020, (Accepted/In press) In : American Statistician.

Research output: Contribution to journalArticle

Bayesian inference
Prior distribution
Random Effects
Bayesian Hierarchical Model
Bayesian Nonparametrics

Assessing predictive accuracy of survival regressions subject to nonindependent censoring

Wang, M., Long, Q., Chen, C. & Zhang, L., Feb 20 2020, In : Statistics in Medicine. 39, 4, p. 469-480 12 p.

Research output: Contribution to journalArticle

Censoring
Regression
Coarsening
Survival Time
Weighting

Association of cognitive impairment and elderly mortality: Differences between two cohorts ascertained 6-years apart in China

Duan, J., Lv, Y. B., Gao, X., Zhou, J. H., Kraus, V. B., Zeng, Y., Su, H. & Shi, X. M., Jan 28 2020, In : BMC Geriatrics. 20, 1, 29.

Research output: Contribution to journalArticle

Open Access
China
Mortality
Cognition
Cognitive Dysfunction
Confidence Intervals
Copula Models
Recurrent Events
Hierarchical Model
Myocardial Infarction
Time-varying

Change is Good: What is New for ToxSci?

Peters, J. M., Jan 1 2020, In : Toxicological sciences : an official journal of the Society of Toxicology. 173, 1, p. 1-2 2 p.

Research output: Contribution to journalArticle

Characterization of ascites-derived aldehyde dehydrogenase–positive ovarian cancer stem cells isolated from Leghorn chickens

Tiwari, A., Hadley, J. A. & Ramachandran, R., Jan 1 2020, (Accepted/In press) In : Poultry science.

Research output: Contribution to journalArticle

Open Access
ovarian neoplasms
ascites
aldehydes
stem cells
chickens

Comparative effectiveness of surgery versus external beam radiation with/without brachytherapy in high-risk localized prostate cancer

Yin, M., Zhao, J., Monk, P., Martin, D., Folefac, E., Joshi, M., Jin, N., Mortazavi, A., Verschraegen, C. & Clinton, S., Jan 1 2020, In : Cancer medicine. 9, 1, p. 27-34 8 p.

Research output: Contribution to journalArticle

Open Access
Brachytherapy
Prostatic Neoplasms
Radiation
Survival
Radiotherapy

Composite score analysis for unsupervised comparison and network visualization of metabolomics data

Kellogg, J. J., Kvalheim, O. M. & Cech, N. B., Jan 25 2020, In : Analytica Chimica Acta. 1095, p. 38-47 10 p.

Research output: Contribution to journalArticle

Metabolomics
Hydrastis
Principal Component Analysis
visualization
Visualization

Connecting and Contrasting the Bayes Factor and a Modified ROPE Procedure for Testing Interval Null Hypotheses

Liao, J. G., Midya, V. & Berg, A., Jan 1 2020, (Accepted/In press) In : American Statistician.

Research output: Contribution to journalArticle

Bayes Factor
Null hypothesis
Equivalence
Testing
Interval

Continuous-time model identification: application on a behavioural (miLife) study

Bekiroglu, K., Russell, M. A., Lagoa, C., Su, R., Sznaier, M., Lanza, S. T. & Odgers, C. L., Jan 1 2020, (Accepted/In press) In : International Journal of Control.

Research output: Contribution to journalArticle

Identification (control systems)
Continuous time systems
Health
Sampling
Violence

Degree of technical difficulty of thyroidectomy for autoimmune thyroid disease

Saadi, R., Brandt, A., Kim, Y., Cottrill, E., Saunders, B., Schaefer, E. & Goldenberg, D., Feb 1 2020, In : Head and Neck. 42, 2, p. 262-268 7 p.

Research output: Contribution to journalArticle

Thyroid Diseases
Thyroidectomy
Autoimmune Diseases
Thyroid Gland
Operative Time

Demographic and psychosocial factors associated with limited health literacy in a community-based sample of older Black Americans

Davis, S. N., Wischhusen, J. W., Sutton, S. K., Christy, S. M., Chavarria, E. A., Sutter, M. E., Roy, S., Meade, C. D. & Gwede, C. K., Feb 2020, In : Patient Education and Counseling. 103, 2, p. 385-391 7 p.

Research output: Contribution to journalArticle

Health Literacy
Demography
Psychology
Colorectal Neoplasms
Health

Design, synthesis characterization and biological evaluation of novel multi-isoform ALDH inhibitors as potential anticancer agents

Dinavahi, S. S., Gowda, R., Bazewicz, C. G., Battu, M. B., Lin, J. M., Chitren, R. J., Pandey, M. K., Amin, S., Robertson, G. P. & Gowda, K., Feb 1 2020, In : European Journal of Medicinal Chemistry. 187, 111962.

Research output: Contribution to journalArticle

Aldehyde Dehydrogenase
Antineoplastic Agents
Protein Isoforms
Poisons
Cells

Detection and removal of biologically active organic micropollutants from hospital wastewater

Castillo Meza, L., Piotrowski, P., Farnan, J., Tasker, T. L., Xiong, B., Weggler, B., Murrell, K., Dorman, F. L., Vanden Heuvel, J. P. & Burgos, W. D., Jan 15 2020, In : Science of the Total Environment. 700, 134469.

Research output: Contribution to journalArticle

Wastewater
wastewater
liquid
Impurities
Liquids

Developing “Nurse AMIE”: A tablet-based supportive care intervention for women with metastatic breast cancer

Schmitz, K. H., Zhang, X., Winkels, R., Schleicher, E., Mathis, K., Doerksen, S., Cream, L., Rosenberg, J., Kass, R., Farnan, M., Halpin-Murphy, P., Suess, R., Zucker, D. & Hayes, M., Jan 1 2020, In : Psycho-Oncology. 29, 1, p. 232-236 5 p.

Research output: Contribution to journalArticle

Development of a Novel Multi-Isoform ALDH Inhibitor Effective as an Antimelanoma Agent

Dinavahi, S. S., Gowda, R., Gowda, K., Bazewicz, C. G., Chirasani, V. R., Battu, M. B., Berg, A., Dokholyan, N. V., Amin, S. & Robertson, G. P., Feb 1 2020, In : Molecular cancer therapeutics. 19, 2, p. 447-459 13 p.

Research output: Contribution to journalArticle

Aldehyde Dehydrogenase
Protein Isoforms
Poisons
Neoplasms
Melanoma

Dose-dependent effect of aerobic exercise on inflammatory biomarkers in a randomized controlled trial of women at high risk of breast cancer

Haley, J. S., Hibler, E. A., Zhou, S., Schmitz, K. H. & Sturgeon, K. M., Jan 15 2020, In : Cancer. 126, 2, p. 329-336 8 p.

Research output: Contribution to journalArticle

Randomized Controlled Trials
Biomarkers
Exercise
Breast Neoplasms
Interleukin-12
1 Citation (Scopus)

Education and gastric cancer risk—An individual participant data meta-analysis in the StoP project consortium

Rota, M., Alicandro, G., Pelucchi, C., Bonzi, R., Bertuccio, P., Hu, J., Zhang, Z. F., Johnson, K. C., Palli, D., Ferraroni, M., Yu, G. P., Galeone, C., López-Carrillo, L., Muscat, J., Lunet, N., Ferro, A., Ye, W., Plymoth, A., Malekzadeh, R., Zaridze, D. & 23 others, Maximovitch, D., Kogevinas, M., Fernández de Larrea, N., Vioque, J., Navarrete-Muñoz, E. M., Tsugane, S., Hamada, G. S., Hidaka, A., Pakseresht, M., Wolk, A., Håkansson, N., Hernández-Ramírez, R. U., López-Cervantes, M., Ward, M., Pourfarzi, F., Mu, L., Kurtz, R. C., Lagiou, A., Lagiou, P., Boffetta, P., Boccia, S., Negri, E. & La Vecchia, C., Feb 1 2020, In : International Journal of Cancer. 146, 3, p. 671-681 11 p.

Research output: Contribution to journalArticle

Stomach Neoplasms
Meta-Analysis
Confidence Intervals
Education
Odds Ratio

Embodied aspects of learning to be a surgeon

Cooper, A. B. & Tisdell, E. J., Jan 1 2020, (Accepted/In press) In : Medical teacher.

Research output: Contribution to journalArticle

learning
surgery
education
educational activities
cognition
1 Citation (Scopus)

Evaluation of Patch Test Findings in Patients with Anogenital Dermatitis

Warshaw, E. M., Kimyon, R. S., Silverberg, J. I., Belsito, D. V., Dekoven, J. G., Maibach, H. I., Zug, K. A., Atwater, A. R., Mathias, T., Sasseville, D., Fowler, J. F., Marks, J. G., Reeder, M. J., Deleo, V. A., Pratt, M. D., Zirwas, M. J., Taylor, J. S. & Fransway, A. F., Jan 2020, In : JAMA Dermatology. 156, 1, p. 85-91 7 p.

Research output: Contribution to journalArticle

Patch Tests
Dermatitis
Allergens
Allergic Contact Dermatitis
Contact Dermatitis

Evaluation of PD-L1 and other immune markers in bladder urothelial carcinoma stratified by histologic variants and molecular subtypes

Li, H., Zhang, Q., Shuman, L., Kaag, M., Raman, J. D., Merrill, S., DeGraff, D. J., Warrick, J. I. & Chen, G., Dec 1 2020, In : Scientific reports. 10, 1, 1439.

Research output: Contribution to journalArticle

Open Access
Tumor Microenvironment
Urinary Bladder
Biomarkers
Carcinoma
Urinary Bladder Neoplasms

Everyday stress components and physical activity: examining reactivity, recovery and pileup

Almeida, D. M., Marcusson-Clavertz, D., Conroy, D. E., Kim, J., Zawadzki, M. J., Sliwinski, M. J. & Smyth, J. M., Feb 1 2020, In : Journal of Behavioral Medicine. 43, 1, p. 108-120 13 p.

Research output: Contribution to journalArticle

Health Behavior
Ecological Momentary Assessment

Examining measurement reactivity in daily diary data on substance use: Results from a randomized experiment

Buu, A., Yang, S., Li, R., Zimmerman, M. A., Cunningham, R. M. & Walton, M. A., Mar 2020, In : Addictive Behaviors. 102, 106198.

Research output: Contribution to journalArticle

Cannabis
Drinking
Alcohols
Monitoring
Experiments

Exhortation to lose weight prior to complex ventral hernia repair: Nudge or noodge?

Ssentongo, P., DeLong, C. G., Ssentongo, A. E., Pauli, E. M. & Soybel, D. I., Jan 2020, In : American Journal of Surgery. 219, 1, p. 136-139 4 p.

Research output: Contribution to journalArticle

Ventral Hernia
Herniorrhaphy
Body Mass Index
Weights and Measures
Hernia

Expanding evaluator competency research: Exploring competencies for program evaluation using the context of non-formal education

Diaz, J., Chaudhary, A. K., Jayaratne, K. S. U. & Assan, E., Apr 2020, In : Evaluation and Program Planning. 79, 101790.

Research output: Contribution to journalArticle

Program Evaluation
education
Delphi Technique
Education
evaluation
1 Citation (Scopus)

Facial Dermatitis in Male Patients Referred for Patch Testing: Retrospective Analysis of North American Contact Dermatitis Group Data, 1994 to 2016

Warshaw, E. M., Schlarbaum, J. P., Maibach, H. I., Silverberg, J. I., Taylor, J. S., Atwater, A. R., Reeder, M. J., Dekoven, J. G., Pratt, M. D., Deleo, V. A., Zug, K. A., Fransway, A. F., Belsito, D. V., Mathias, T., Fowler, J. F., Marks, J. G., Sasseville, D. & Zirwas, M. J., Jan 2020, In : JAMA Dermatology. 156, 1, p. 79-84 6 p.

Research output: Contribution to journalArticle

Contact Dermatitis
Dermatitis
Allergens
Irritant Dermatitis
Grooming

Gastrointestinal hypoalgesia in inflammatory bowel disease

Coates, M. D., Soriano, C., Dalessio, S., Stuart, A., Walter, V., Koltun, W., Bernasko, N., Tinsley, A., Clarke, K. & Williams, E. D., Jan 1 2020, In : Annals of Gastroenterology. 33, 1, p. 45-52 8 p.

Research output: Contribution to journalArticle

Open Access
Inflammatory Bowel Diseases
Pain
Tertiary Care Centers
Fistula
Opiate Alkaloids

Generalizing findings from a randomized controlled trial to a real-world study of the iLookOut, an online education program to improve early childhood care and education providers' knowledge and attitudes about reporting child maltreatment

Yang, C., Panlilio, C., Verdiglione, N., Lehman, E. B., Hamm, R. M., Fiene, R., Dore, S., Bard, D. E., Grable, B. & Levi, B., Jan 1 2020, In : PloS one. 15, 1, e0227398.

Research output: Contribution to journalArticle

Open Access
online courses
randomized clinical trials
Child Abuse
education programs
childhood

Genome-wide analysis of the NAC domain transcription factor gene family in Theobroma cacao

Shen, S., Zhang, Q., Shi, Y., Sun, Z., Zhang, Q., Hou, S., Wu, R., Jiang, L., Zhao, X. & Guo, Y., Jan 2020, In : Genes. 11, 1, 35.

Research output: Contribution to journalArticle

Open Access
Cacao
Transcription Factors
Genome
Genes
Plant Development

HPV vaccine requirements, opt-outs and providers’ support: Key studies missing from a recent systematic review

Calo, W. A. & Brewer, N. T., Jan 2 2020, In : Human Vaccines and Immunotherapeutics. 16, 1, p. 128-130 3 p.

Research output: Contribution to journalArticle

Papillomavirus Vaccines

Hypermethylation of FOXA1 and allelic loss of PTEN drive squamous differentiation and promote heterogeneity in bladder cancer

Osei-Amponsa, V., Buckwalter, J. M., Shuman, L., Zheng, Z., Yamashita, H., Walter, V., Wildermuth, T., Ellis-Mohl, J., Liu, C., Warrick, J. I., Shantz, L. M., Feehan, R. P., Al-Ahmadie, H., Mendelsohn, C., Raman, J. D., Kaestner, K. H., Wu, X. R. & DeGraff, D. J., Feb 6 2020, In : Oncogene. 39, 6, p. 1302-1317 16 p.

Research output: Contribution to journalArticle

Loss of Heterozygosity
Urinary Bladder Neoplasms
Urothelium
Inborn Genetic Diseases
DNA

Incidence, Risk Factors, and Outcomes of Patients Who Develop Mucosal Barrier Injury-Laboratory Confirmed Bloodstream Infections in the First 100 Days After Allogeneic Hematopoietic Stem Cell Transplant

Dandoy, C. E., Kim, S., Chen, M., Ahn, K. W., Ardura, M. I., Brown, V., Chhabra, S., Diaz, M. A., Dvorak, C., Farhadfar, N., Flagg, A., Ganguly, S., Hale, G. A., Hashmi, S. K., Hematti, P., Martino, R., Nishihori, T., Nusrat, R., Olsson, R. F., Rotz, S. J. & 5 others, Sung, A. D., Perales, M. A., Lindemans, C. A., Komanduri, K. V. & Riches, M. L., Jan 3 2020, In : JAMA network open. 3, 1, p. e1918668

Research output: Contribution to journalArticle

Open Access
Hematopoietic Stem Cells
Transplants
Incidence
Wounds and Injuries
Infection

iScore: a novel graph kernel-based function for scoring protein-protein docking models

Geng, C., Jung, Y., Renaud, N., Honavar, V., Bonvin, A. M. J. J. & Xue, L. C., Jan 1 2020, In : Bioinformatics (Oxford, England). 36, 1, p. 112-121 10 p.

Research output: Contribution to journalArticle

Open Access
Docking
Scoring
Conformation
kernel
Proteins

km23-1/DYNLRB1 regulation of MEK/ERK signaling and R-Ras in invasive human colorectal cancer cells

Raza, A., Pandey, M. S., Jin, Q. & Mulder, K. M., Jan 1 2020, In : Cell Biology International. 44, 1, p. 155-165 11 p.

Research output: Contribution to journalArticle

Mitogen-Activated Protein Kinase Kinases
Extracellular Signal-Regulated MAP Kinases
Dyneins
Colorectal Neoplasms
Transforming Growth Factors

Lesion Network Mapping Analysis Identifies Potential Cause of Postoperative Depression in a Case of Cingulate Low-Grade Glioma

Mansouri, A., Boutet, A., Elias, G., Germann, J., Yan, H., Babu, H., Lozano, A. M. & Valiante, T. A., Jan 2020, In : World neurosurgery. 133, p. 278-282 5 p.

Research output: Contribution to journalArticle

Glioma
Depression
Neoplasms
Major Depressive Disorder
Seizures

Ligand-induced disorder-to-order transitions characterized by structural proteomics and molecular dynamics simulations

Makepeace, K. A. T., Brodie, N. I., Popov, K. I., Gudavicius, G., Nelson, C. J., Petrotchenko, E. V., Dokholyan, N. V. & Borchers, C. H., Jan 16 2020, In : Journal of Proteomics. 211, 103544.

Research output: Contribution to journalArticle

Open Access
Molecular Dynamics Simulation
Proteomics
Molecular dynamics
Ligands
Computer simulation

Lipidic synthetic alkaloids as SK3 channel modulators. Synthesis and biological evaluation of 2-substituted tetrahydropyridine derivatives with potential anti-metastatic activity

Kouba, S., Braire, J., Félix, R., Chantôme, A., Jaffrès, P. A., Lebreton, J., Dubreuil, D., Pipelier, M., Zhang, X., Trebak, M., Vandier, C., Mathé-Allainmat, M. & Potier-Cartereau, M., Jan 15 2020, In : European Journal of Medicinal Chemistry. 186, 111854.

Research output: Contribution to journalArticle

Alkaloids
Modulators
Cells
Breast Neoplasms
Derivatives

Liver transplant candidates have impaired quality of life across health domains as assessed by computerized testing

Stine, J. G., Stukenborg, G. J., Wang, J., Adkins, A., Niccum, B., Zimmet, A. & Argo, C. K., Jan 1 2020, In : Annals of Hepatology. 19, 1, p. 62-68 7 p.

Research output: Contribution to journalArticle

Open Access
Quality of Life
Transplants
Liver
Health
Liver Transplantation
Peer Group
Sports
Drinking
Alcohols
Students

Matrix metalloproteinases cleave membrane-bound PD-L1 on CD90+ (myo-)fibroblasts in Crohn's disease and regulate Th1/Th17 cell responses

Aguirre, J. E., Beswick, E. J., Grim, C., Uribe, G., Tafoya, M., Chacon Palma, G., Samedi, V., McKee, R., Villeger, R., Fofanov, Y., Cong, Y., Yochum, G., Koltun, W., Powell, D. & Pinchuk, I. V., Jan 9 2020, In : International immunology. 32, 1, p. 57-68 12 p.

Research output: Contribution to journalArticle

Th17 Cells
Th1 Cells
Matrix Metalloproteinases
Crohn Disease
Fibroblasts

Metabolically healthy obesity is associated with longitudinal changes in high-density lipoprotein cholesterol in Chinese adults

Yang, Y., Wan, Y. P., Fan, Z. P., Gao, X., Jiang, A. L. & Xu, R. Y., Jan 1 2020, (Accepted/In press) In : Eating and Weight Disorders.

Research output: Contribution to journalArticle

HDL Cholesterol
Blood Pressure
Blood Glucose
Weights and Measures
Fasting

Metatranscriptomic analysis of the mouse gut microbiome response to the persistent organic pollutant 2,3,7,8-tetrachlorodibenzofuran

Nichols, R. G., Zhang, J., Cai, J., Murray, I. A., Koo, I., Smith, P. B., Perdew, G. H. & Patterson, A. D., Jan 2020, In : Metabolites. 10, 1, 1.

Research output: Contribution to journalArticle

Open Access
Organic pollutants
Body Weight
Lipopolysaccharides
Aryl Hydrocarbon Receptors
Glutamic Acid

Mice lacking the matrilin family of extracellular matrix proteins develop mild skeletal abnormalities and are susceptible to age-associated osteoarthritis

Li, P., Fleischhauer, L., Nicolae, C., Prein, C., Farkas, Z., Saller, M. M., Prall, W. C., Wagener, R., Heilig, J., Niehoff, A., Clausen-Schaumann, H., Alberton, P. & Aszodi, A., Jan 2 2020, In : International journal of molecular sciences. 21, 2, 666.

Research output: Contribution to journalArticle

Open Access
Matrilin Proteins
Extracellular Matrix Proteins
abnormalities
Cartilage
cartilage