Research Output 1955 2020

Filter
Conference article
2018
Engineering research
Chemical engineering
Students
Teaching
2 Citations (Scopus)

Leveraging putative enhancer-promoter interactions to investigate two-way epistasis in Type 2 Diabetes GWAS

Manduchi, E., Chesi, A., Hall, M. A., Grant, S. F. A. & Moore, J. H., Jan 1 2018, In : Pacific Symposium on Biocomputing. 0, 212669, p. 548-558 11 p.

Research output: Contribution to journalConference article

Genome-Wide Association Study
Medical problems
Nucleotides
Genomics
Polymorphism
2017
1 Citation (Scopus)

Clinical immersion and team-based design: Into a third year

Kadlowec, J., Merrill, T., Sood, S., Ryan, J. G., Attaluri, A. & Hirsh, R. A., Jun 24 2017, In : ASEE Annual Conference and Exposition, Conference Proceedings. 2017-June

Research output: Contribution to journalConference article

Students
Intellectual property
Physiology
Specifications
Industry
2016
2 Citations (Scopus)
Students
2 Citations (Scopus)

Phenome-wide interaction study (PheWIS) in aids clinical trials group data (ACTG)

Verma, S. S., Frase, A. T., Verma, A., Pendergrass, S. A., Mahony, S. A., Haas, D. W. & Ritchie, M. D., Jan 1 2016, In : Pacific Symposium on Biocomputing. p. 57-68 12 p.

Research output: Contribution to journalConference article

Genes
Clinical Trials
Phenotype
Nucleotides
Polymorphism
10 Citations (Scopus)

Remember where you came from: On the second-order random walk based proximity measures

Wu, Y., Bian, Y. & Zhang, X., Jan 1 2016, In : Proceedings of the VLDB Endowment. 10, 1, p. 13-24 12 p.

Research output: Contribution to journalConference article

Monte Carlo methods
2015
2 Citations (Scopus)

Architecture: A Missing Piece in Real-estate Studies of Sustainable Houses

Fadaei, S., Iulo, L. D. & Yoshida, J., Jan 1 2015, In : Procedia Engineering. 118, p. 813-818 6 p.

Research output: Contribution to journalConference article

Economics
Marketing
Costs
Life cycle
2 Citations (Scopus)

Empowering Community Health Workers with Inkjet-printed Diagnostic Test Strips

Ranslow, A., Crompton, D., Mehta, K., Butler, P. J. & Adair, J. H., Jan 1 2015, In : Procedia Engineering. 107, p. 205-214 10 p.

Research output: Contribution to journalConference article

Pathogens
Developing countries
Profitability
Screening
Health

Nanosensor system for monitoring brain activity and drowsiness

Ramasamy, M., Varadan, V. K. & Harbaugh, R., Jan 1 2015, In : Proceedings of SPIE - The International Society for Optical Engineering. 9434, January, 94340A.

Research output: Contribution to journalConference article

Nanosensors
sleep
accidents
Accidents
brain
57 Citations (Scopus)

Robust local community detection: On free rider effect and its elimination

Wu, Y., Jin, R., Li, J. & Zhang, X., Jan 1 2015, In : Proceedings of the VLDB Endowment. 8, 7 7, p. 798-809 12 p.

Research output: Contribution to journalConference article

Experiments

Session introduction: Characterizing the importance of environmental exposures, interactions between the environment and genetic architecture, and genetic interactions: New methods for understanding the etiology of complex traits and disease

Hall, M., Verma, S. S., Wall, D. P., Moore, J. H., Keating, B., Campbell, D. B., Gibson, G., Asselbergs, F. W. & Pendergrass, S., Jan 1 2015, In : Pacific Symposium on Biocomputing. p. 156-160 5 p.

Research output: Contribution to journalConference article

Wireless nanosensors for monitoring concussion of football players

Ramasamy, M., Harbaugh, R. & Varadan, V. K., Jan 1 2015, In : Proceedings of SPIE - The International Society for Optical Engineering. 9434, January, 943408.

Research output: Contribution to journalConference article

Nanosensors
brain
Brain
Monitoring
helmets
2014
1 Citation (Scopus)

Applications and design of reinforced silicon nitride windows for in situ liquid transmission electron microscopy

Dukes, M. J., Dukes, A. D., Klein, K. L., Thomas, R., Kelly, D. F. & Damiano, J., Aug 1 2014, In : Microscopy and Microanalysis. 20, 3, p. 1090-1091 2 p.

Research output: Contribution to journalConference article

Open Access
Silicon nitride
silicon nitrides
Transmission electron microscopy
transmission electron microscopy
Liquids
22 Citations (Scopus)

Environment-wide association study (EWAS) for type 2 diabetes in the Marshfield Personalized Medicine Research Project Biobank

Hall, M., Dudek, S. M., Goodloe, R., Crawford, D. C., Pendergrass, S. A., Peissig, P., Brilliant, M., McCarty, C. A. & Ritchie, M. D., Jan 1 2014, In : Pacific Symposium on Biocomputing. p. 200-211 12 p.

Research output: Contribution to journalConference article

Precision Medicine
Nutrition
Medical problems
Type 2 Diabetes Mellitus
Nutrition Surveys
2 Citations (Scopus)
Patents
Trajectories
Trajectory
Evaluation
Citations
5 Citations (Scopus)

Updates on first-line therapy for metastatic pancreatic adenocarcinoma

Marks, E., Saif, M. W. & Jia, Y., Jan 1 2014, In : Journal of the Pancreas. 15, 2, p. 99-102 4 p.

Research output: Contribution to journalConference article

gemcitabine
Adenocarcinoma
Survival
Pancreatic Neoplasms
Neoplasms
2013

Binary time-series query framework for efficient quantitative trait association study

Wang, H. & Zhang, X., Dec 1 2013, In : Proceedings - IEEE International Conference on Data Mining, ICDM. p. 777-786 10 p., 6729562.

Research output: Contribution to journalConference article

Time series
Testing
16 Citations (Scopus)

Next-generation analysis of cataracts: Determining knowledge driven gene-gene interactions using biofilter, and gene-environment interactions using the PhenX Toolkit

Pendergrass, S. A., Verma, S. S., Hall, M. A., Holzinger, E. R., Moore, C. B., Wallace, J. R., Dudek, S. M., Huggins, W., Kitchner, T., Waudby, C., Berg, R., McCarty, C. A. & Ritchie, M. D., Jan 1 2013, In : Pacific Symposium on Biocomputing. p. 147-158 12 p.

Research output: Contribution to journalConference article

Gene-Environment Interaction
Cataract
Single Nucleotide Polymorphism
Electronic Health Records
Genes
2011

A case study in using ZFA and PATO for describing histological phenotypes in the larval zebrafish

Canada, B., Thomas, G., Cooper, T. & Cheng, K., Dec 1 2011, In : CEUR Workshop Proceedings. 833, 1 p.

Research output: Contribution to journalConference article

An ontology-based approach to linking model organisms and resources to human diseases

Mungall, C. J., Anderson, D., Bandrowski, A., Canada, B., Chatyr-Aryamontri, A., Cheng, K., Conn, P. M., Dolinski, K., Ellisman, M., Eppig, J., Grethe, J. S., Kemnitz, J., Iadonato, S., Larson, S. D., Magness, C., Martone, M. E., Tyers, M., Torniai, C., Troyanskaya, O., Turner, J. & 2 others, Westerfield, M. & Haendel, M. A., Dec 1 2011, In : CEUR Workshop Proceedings. 833, p. 263-265 3 p.

Research output: Contribution to journalConference article

Ontology
Gene expression
Animals
Genes

SHIRAZ and CABERNET: Leveraging automation, crowdsourcing, and ontologies to improve the accuracy and throughput of zebrafish histological phenotype annotations

Canada, B., Thomas, G., Schleicher, J., Wang, J. Z. & Cheng, K. C., Dec 1 2011, In : CEUR Workshop Proceedings. 833, p. 288-289 2 p.

Research output: Contribution to journalConference article

Ontology
Automation
Genes
Throughput
Histology
2009
blood
Optical microscopy
Microscopy
Ultrasonics
Scattering
2008

2007 ICRP recommendation: it's changed, but it's still effective!

Ferenci, M. S., Hertel, N. E., Veinot, K. G. & McDonald, J. C., Dec 1 2008, In : Transactions of the American Nuclear Society. 99, p. 623-624 2 p.

Research output: Contribution to journalConference article

2006

A reflective design of a boron neutron capture enharaced fast neutron assembly

Wang, Z., Hertel, N. E. & Lennox, A., Dec 21 2006, In : Transactions of the American Nuclear Society. 95, p. 436-437 2 p.

Research output: Contribution to journalConference article

Boron
Neutrons

Fermilab neutron therapy facility neutron spectrum determination by threshold foils

Wang, Z., Hertel, N. E., Burgett, E. & Lennox, A., Jan 1 2006, In : Proceedings of Science.

Research output: Contribution to journalConference article

neutron spectra
foils
therapy
neutrons
thresholds

Neutron spectral fluence rate measurement at NC State University PULSTAR Research Reactor

Wang, Z., Hertel, N. E., Burgett, E. & Blaylock, D., Dec 21 2006, In : Transactions of the American Nuclear Society. 95, p. 619-620 2 p.

Research output: Contribution to journalConference article

Research reactors
Neutrons
2005
10 Citations (Scopus)

3D image fusion and guidance for computer-assisted bronchoscopy

Higgins, W. E., Rai, L., Merritt, S. A., Lu, K., Linger, N. T. & Yu, K. C., Dec 1 2005, In : Proceedings of SPIE - The International Society for Optical Engineering. 6016, 60160A.

Research output: Contribution to journalConference article

Electronic guidance systems
physicians
Image fusion
Image Fusion
3D Image
1 Citation (Scopus)

Classification of chromosome sequences with entropy kernel and LKPLS algorithm

Liu, Z. & Chen, D., Oct 31 2005, In : Lecture Notes in Computer Science. 3644, PART I, p. 543-551 9 p.

Research output: Contribution to journalConference article

Chromosomes
Chromosome
Entropy
kernel
Support vector machines
38 Citations (Scopus)

Determinstic lateral displacement MEMS device for continuous blood cell separation

Zheng, S., Yung, R., Tai, Y. C. & Kasdan, H., Oct 25 2005, In : Proceedings of the IEEE International Conference on Micro Electro Mechanical Systems (MEMS). p. 851-854 4 p.

Research output: Contribution to journalConference article

blood cells
leukocytes
microelectromechanical systems
MEMS
Blood
1 Citation (Scopus)

Evaluation of ischemic stroke hybrid segmentation in a rat model of temporary middle cerebral artery occlusion using ground truth from histologic and MR data

Imielinska, C., Jin, Y., Liu, X., Rosiene, J., Zacharia, B., Komotar, R. J., Mocco, J., Sughrue, M. E., Grobelny, B., Sisti, A., Silverberg, J., Khandji, J., Cohen, H., Connolly, S. & D'Ambrosio, A. L., Aug 25 2005, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5747, III, p. 1732-1741 10 p., 201.

Research output: Contribution to journalConference article

ground truth
occlusion
Middle Cerebral Artery Infarction
arteries
strokes
20 Citations (Scopus)

Information supply chain: A unified framework for information-sharing

Sun, S. & Yen, J., Sep 26 2005, In : Lecture Notes in Computer Science. 3495, p. 422-428 7 p.

Research output: Contribution to journalConference article

Information Sharing
Supply Chain
Supply chains
Supply chain management
Management science
2 Citations (Scopus)

Methods for the fabrication of IR windows from nanoparticulates

Sengupta, S., Revur, R. R., Schorr, J. R., Adair, J. & Szepesi, C., Oct 25 2005, In : Proceedings of SPIE - The International Society for Optical Engineering. 5786, p. 206-216 11 p., 23.

Research output: Contribution to journalConference article

Infrared transmission
preforms
Zirconia
Fabrication
Yttrium oxide
3 Citations (Scopus)

System for 3D visualization and data mining of large vascular trees

Yu, K. C., Ritman, E. L. & Higgins, W. E., Dec 1 2005, In : Proceedings of SPIE - The International Society for Optical Engineering. 6016, 60160B.

Research output: Contribution to journalConference article

data mining
3D Visualization
Data mining
Data Mining
Visualization
18 Citations (Scopus)

Virtual bronchoscopy for quantitative airway analysis

Kiraly, A. P., Reinhardt, J. M., Huffman, E. A., McLennan, G. & Higgins, W. E., Aug 25 2005, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5746, I, p. 369-383 15 p., 41.

Research output: Contribution to journalConference article

Bronchoscopy
quantitative analysis
delineation
chest
interrogation

X-ray diffraction and H-storage in ultrasmall palladium particles

Narehood, D. G., Goto, H., Kishore, S., Adair, J. H., Nelson, J. A., Sokol, P. E. & Eklund, P. C., Dec 1 2005, In : ACS Division of Fuel Chemistry, Preprints. 50, 2, p. 546-547 2 p.

Research output: Contribution to journalConference article

Palladium
Isotherms
X ray diffraction
Metal nanoparticles
Lattice constants

X-ray diffraction and H-storage in ultra-small Pd particles

Narehood, D., Goto, H., Kishore, S., Adair, J. H., Nelson, J. A., Sokol, P. E. & Eklund, P. C., Dec 1 2005, In : ACS National Meeting Book of Abstracts. 230

Research output: Contribution to journalConference article

Metal nanoparticles
Lattice constants
Sintering
Phase transitions
X ray diffraction
2004
11 Citations (Scopus)

CT-video registration accuracy for virtual guidance of bronchoscopy

Helferty, J. P., Hoffman, E. A., McLennan, G. & Higgins, W. E., Jul 5 2004, In : Proceedings of SPIE - The International Society for Optical Engineering. 5369, p. 150-164 15 p.

Research output: Contribution to journalConference article

Biopsy
Registration
Guidance
lungs
Image matching

Deep-brain stimulator and control of Parkinson's disease

Varadan, V. K., Harbaugh, R. & Abraham, J. K., Dec 17 2004, In : Proceedings of SPIE - The International Society for Optical Engineering. 5389, p. 314-323 10 p.

Research output: Contribution to journalConference article

Parkinson disease
Parkinson's Disease
brain
Brain
sensors
3 Citations (Scopus)

DNA-directed assembly of barcoded nanowires onto glass slides for biosensing applications

Stoermer, R. L. & Keating, C. D., Dec 1 2004, In : Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 5588, p. 51-58 8 p., 07.

Research output: Contribution to journalConference article

Nanowires
chutes
Glass
DNA
nanowires
3 Citations (Scopus)

Graphical tools for improved definition of 3D arterial trees

Yu, K. C., Ritman, E. L. & Higgins, W. E., Jul 6 2004, In : Proceedings of SPIE - The International Society for Optical Engineering. 5369, p. 485-495 11 p.

Research output: Contribution to journalConference article

Imaging techniques
Micro-CT
CT Image
Graphics
3D Image
1 Citation (Scopus)

Measurements of neutron spectrum at fermilab neutron therapy facility

Wang, Z., Hertel, N. E. & Lennox, A., Dec 1 2004, In : Transactions of the American Nuclear Society. 91, p. 679-680 2 p.

Research output: Contribution to journalConference article

Neutrons
1 Citation (Scopus)

Modeling the geometry, hemodynamics and tissue mechanics of cerebral aneurysms

Ma, B., Lu, J., Harbaugh, R. & Raghavan, M., Jan 1 2004, In : Advances in Bioengineering, BED. p. 397-398 2 p., IMECE2004-60024.

Research output: Contribution to journalConference article

Hemodynamics
Mechanics
Tissue
Geometry
Shear stress
4 Citations (Scopus)

Nano-to-micro self-assembly using shear flow devices

Shih, C. Y., Zheng, S., Meng, E., Tai, Y. C., Liu, Y. & Stoddart, J. F., Jul 19 2004, In : Proceedings of the IEEE International Conference on Micro Electro Mechanical Systems (MEMS). p. 422-425 4 p.

Research output: Contribution to journalConference article

Shear flow
shear flow
Self assembly
self assembly
Molecules

Osteoblast adhesion of breast cancer cells with scanned image microscopy

Miyasaka, C., Tittmann, B. R., Mercer, R. R. & Mastro, A. M., Oct 26 2004, In : Proceedings of SPIE - The International Society for Optical Engineering. 5394, p. 273-279 7 p.

Research output: Contribution to journalConference article

osteoblasts
multiple docking adapters
Osteoblasts
Adhesion
Breast Cancer
5 Citations (Scopus)

Proactive communications in agent teamwork

Yen, J., Fan, X. & Volz, R. A., Dec 1 2004, In : Lecture Notes in Artificial Intelligence (Subseries of Lecture Notes in Computer Science). 2922, p. 271-290 20 p.

Research output: Contribution to journalConference article

Team Work
Communication
Semantics
Agent Architecture
Specifications

Side view imaging for three dimensional microflow profile reconstruction

Yang, S., Dong, C., Leyton-Mange, J. & Zahn, J. D., Dec 1 2004, In : American Society of Mechanical Engineers, Fluids Engineering Division (Publication) FED. 260, p. 333-337 5 p., IMECE2004-60978.

Research output: Contribution to journalConference article

Microchannels
Imaging systems
Strain rate
Imaging techniques
5 Citations (Scopus)

Three-dimensional true color topographical analysis of the pulmonary airways

Suter, M., Reinhardt, J. M., Sonka, M., Higgins, W., Hoffman, E. A. & McLennan, G., Jul 5 2004, In : Proceedings of SPIE - The International Society for Optical Engineering. 5369, p. 189-198 10 p.

Research output: Contribution to journalConference article

CT Image
Color
color
Three-dimensional
3D Image
2003
16 Citations (Scopus)

Integrated bronchoscopic video tracking and 3D CT registration for virtual bronchoscopy

Higgins, W. E., Helferty, J. P. & Padfield, D. R., Sep 19 2003, In : Proceedings of SPIE - The International Society for Optical Engineering. 5031, p. 80-89 10 p.

Research output: Contribution to journalConference article

physicians
Registration
lungs
Biopsy
cancer
8 Citations (Scopus)

Toward reliable multi-generational analysis of anatomical trees in 3D high-resolution CT images

Yu, K. C., Ritman, E. L., Kiraly, A. P., Wan, S. Y., Zamir, M. & Higgins, W. E., Sep 22 2003, In : Proceedings of SPIE - The International Society for Optical Engineering. 5031, p. 178-186 9 p.

Research output: Contribution to journalConference article

CT Image
High Resolution
high resolution
Image segmentation
Micro-CT
2002
4 Citations (Scopus)

Bio-MEMS sensors for real-time shear stress on endothelial cell dynamics

Hsiai, T. K., Cho, S. K., Wong, P. K., Ing, M., Navab, M., Reddy, S., Demer, L. L. & Ho, C. M., Dec 1 2002, In : Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings. 3, p. 1828-1829 2 p.

Research output: Contribution to journalConference article

Micro-Electrical-Mechanical Systems
Endothelial cells
Shear stress
Endothelial Cells
Sensors