Penn State Clinical and Translational Science Institute (CTSI)

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  • Conference contribution

    Abstraction augmented Markov models

    Caragea, C., Silvescu, A., Caragea, D. & Honavar, V., 2010, Proceedings - 10th IEEE International Conference on Data Mining, ICDM 2010. p. 68-77 10 p. 5693960. (Proceedings - IEEE International Conference on Data Mining, ICDM).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    2 Scopus citations
  • Abstraction super-structuring normal forms: Towards a theory of structural induction

    Silvescu, A. & Honavar, V., 2013, Algorithmic Probability and Friends: Bayesian Prediction and Artificial Intelligence - Papers from the Ray Solomonoff 85th Memorial Conference. Springer Verlag, p. 339-350 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7070 LNAI).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • A characterization of Markov equivalence classes of Relational Causal Models under path semantics

    Lee, S. & Honavar, V., Jan 1 2016, 32nd Conference on Uncertainty in Artificial Intelligence 2016, UAI 2016. Janzing, D. & Ihler, A. (eds.). Association For Uncertainty in Artificial Intelligence (AUAI), p. 387-396 10 p. (32nd Conference on Uncertainty in Artificial Intelligence 2016, UAI 2016).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    4 Scopus citations
  • A comprehensive investigation on industry-sponsored design projects' effectiveness at the first-year level: Phase I

    Okudan, G. E., Mohammed, S., Ogot, M. & Wu, X., 2005, 2005 ASEE Annual Conference and Exposition, Conference Proceedings. p. 2049-2062 14 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Adaptive structural co-regularization for unsupervised multi-view feature selection

    Hsieh, T. Y., Sun, Y., Wang, S. & Honavar, V., Nov 2019, Proceedings - 10th IEEE International Conference on Big Knowledge, ICBK 2019. Gao, Y., Moller, R., Wu, X. & Kotagiri, R. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 87-96 10 p. 8944744. (Proceedings - 10th IEEE International Conference on Big Knowledge, ICBK 2019).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Adversarial Attacks on Graph Neural Networks via Node Injections: A Hierarchical Reinforcement Learning Approach

    Sun, Y., Wang, S., Tang, X., Hsieh, T. Y. & Honavar, V., Apr 20 2020, The Web Conference 2020 - Proceedings of the World Wide Web Conference, WWW 2020. Association for Computing Machinery, Inc, p. 673-683 11 p. (The Web Conference 2020 - Proceedings of the World Wide Web Conference, WWW 2020).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    Open Access
    11 Scopus citations
  • A dynamical systems model for improving gestational weight gain behavioral interventions

    Dong, Y., Rivera, D. E., Thomas, D. M., Navarro-Barrientos, J. E., Downs, D. S., Williams, J. S. & Collins, L. M., 2012, 2012 American Control Conference, ACC 2012. p. 4059-4064 6 p. 6315424

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    23 Scopus citations
  • A dynamical systems model for understanding behavioral interventions for weight loss

    Navarro-Barrientos, J. E., Rivera, D. E. & Collins, L. M., Dec 24 2010, Advances in Social Computing - Third International Conference on Social Computing, Behavioral Modeling, and Prediction, SBP 2010, Proceedings. p. 170-179 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6007 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    9 Scopus citations
  • A framework for developing epitope prediction tools

    El-Manzalawy, Y. & Honavar, V., Oct 25 2010, 2010 ACM International Conference on Bioinformatics and Computational Biology, ACM-BCB 2010. p. 660-661 2 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    7 Scopus citations
  • A framework for Semantic Web services discovery

    Pathak, J., Koul, N., Caragea, D. & Honavar, V. G., 2005, WIDM 2005 - Proceedings of the 7th ACM International Workshop on Web Information and Data Management, Co-located with CIKM 2005. p. 45-50 6 p. (Proceedings of the Interntational Workshop on Web Information and Data Management WIDM).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    72 Scopus citations
  • A general strategy for knowledge acquisition from semantically heterogeneous data sources

    Caragea, D., Bao, J. & Honavar, V., 2006, Semantic Web for Collaborative Knowledge Acquisition - Papers from the AAAI Fall Symposium, Technical Report. p. 1-8 8 p. (AAAI Fall Symposium - Technical Report; vol. FS-06-06).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • A graphical model for shallow parsing

    Silvescu, A. & Honavar, V., 2004, Adaptive Text Extraction and Mining, ATEM-2004 - Papers from the AAAI-04 Workshop, Technical Report. Vol. WS-04-01. p. 89 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • A Hybrid Model Predictive Control strategy for optimizing a smoking cessation intervention

    Timms, K. P., Rivera, D. E., Piper, M. E. & Collins, L. M., 2014, 2014 American Control Conference, ACC 2014. Institute of Electrical and Electronics Engineers Inc., p. 2389-2394 6 p. 6859466. (Proceedings of the American Control Conference).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    10 Scopus citations
  • Algorithmic Bias in Recidivism Prediction: A Causal Perspective

    Khademi, A. & Honavar, V., 2020, AAAI 2020 - 34th AAAI Conference on Artificial Intelligence. AAAI press, p. 13839-13840 2 p. (AAAI 2020 - 34th AAAI Conference on Artificial Intelligence).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Algorithms and software for collaborative discovery from autonomous, semantically heterogeneous, distributed information sources

    Caragea, D., Zhang, J., Bao, J., Pathak, J. & Honavar, V., 2005, Discovery Science - 8th International Conference, DS 2005, Proceedings. p. 14 1 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3735 LNAI).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    3 Scopus citations
  • Algorithms and software for collaborative discovery from autonomous, semantically heterogeneous, distributed information sources

    Caragea, D., Zhang, J., Bao, J., Pathak, J. & Honavar, V., 2005, Algorithmic Learning Theory - 16th International Conference, ALT 2005, Proceedings. p. 13-44 32 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3734 LNAI).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    14 Scopus citations
  • Aligning biomolecular networks using modular graph kernels

    Towfic, F., Greenlee, M. H. W. & Honavar, V., Nov 2 2009, Algorithms in Bioinformatics - 9th International Workshop, WABI 2009, Proceedings. p. 345-361 17 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5724 LNBI).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    17 Scopus citations
  • A multiagent system infrastructure and negotiation framework for electric power systems

    Vishwanathan, V., McCalley, J. & Honavar, V., 2001, 2001 IEEE Porto Power Tech Proceedings. p. 438-444 7 p. 964638. (2001 IEEE Porto Power Tech Proceedings; vol. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    16 Scopus citations
  • Analysis of protein protein dimeric interfaces

    Wu, F., Towfic, F., Dobbs, D. & Honavar, V., 2007, Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2007. p. 35-41 7 p. 4413034. (Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2007).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    7 Scopus citations
  • Analysis of utility-theoretic heuristics for intelligent adaptive network routing

    Mikler, A. R., Honavar, V. & Wong, J. S. K., 1996, Proceedings of the National Conference on Artificial Intelligence. Anon (ed.). AAAI, Vol. 1. p. 96-101 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    5 Scopus citations
  • An analysis of conformational changes upon RNA-Protein binding

    Sankar, K., Jernigan, R. L., Walia, R. R., Honavar, V. G., Mann, C. M. & Dobbs, D., Sep 20 2014, ACM BCB 2014 - 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, p. 592-593 2 p. (ACM BCB 2014 - 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • A negotiation model in agent-mediated electronic commerce

    Chung, M. & Honavar, V., 2000, Proceedings - International Symposium on Multimedia Software Engineering. Institute of Electrical and Electronics Engineers Inc., p. 403-410 8 p. 897242. (Proceedings - International Symposium on Multimedia Software Engineering).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    14 Scopus citations
  • An incremental interactive algorithm for regular grammar inference

    Parekh, R. & Honavar, V., 1996, Grammatical Inference: Learning Syntax from Sentences - 3rd International Colloquium, ICGI-1996, Proceedings. de la Higuera, C. & Miclet, L. (eds.). Springer Verlag, p. 238-249 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 1147).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    17 Scopus citations
  • An investigation on the students' perception of dissection effectiveness in a redesign context

    Okudan, G. E. & Mohammed, S., 2009, 2008 Proceedings of the ASME International Design Engineering Technical Conferences and Computers and Information in Engineering Conference, DETC 2008. Vol. 5. p. 395-401 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • An investigation on the students' perception of dissection effectiveness in a redesign context

    Okudan, G. E. & Mohammed, S., 2008, ASME 2008 International Design Engineering Technical Conferences and Computers and Information in Engineering Conference, IDETC/CIE2008. p. 395-401 7 p. (Proceedings of the ASME Design Engineering Technical Conference; vol. 5).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Annotating images and image objects using a hierarchical Dirichlet process model

    Yakhnenko, O. & Honavar, V., 2008, Proceedings of the MDM 2008 Workshop - 9th International Workshop on Multimedia Data Mining, Held in Conjunction with the ACM SIGKDD 2008. p. 1-7 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    46 Scopus citations
  • An on-line data acquisition and analysis system to determine cardiac output: A one-step CO2 rebreathing technique

    Sittig, D. F. & Pawelczyk, J. A., Dec 1 1991, Proceedings of the Annual Conference on Engineering in Medicine and Biology. pt 3 ed. Publ by IEEE, p. 1179-1180 2 p. (Proceedings of the Annual Conference on Engineering in Medicine and Biology; vol. 13, no. pt 3).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • A polynomial time incremental algorithm for learning DFA

    Parekh, R., Nichitiu, C. & Honavar, V., Jan 1 1998, Grammatical Inference - 4th International Colloquium, ICGI 1998, Proceedings. Honavar, V. & Slutzki, G. (eds.). Springer Verlag, p. 37-49 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 1433).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    15 Scopus citations
  • A risk-based model predictive control approach to adaptive interventions in behavioral health

    Zafra-Cabeza, A., Rivera, D. E., Collins, L. M., Ridao, M. A. & Camacho, E. F., 2006, Proceedings of the 45th IEEE Conference on Decision and Control 2006, CDC. Institute of Electrical and Electronics Engineers Inc., p. 673-678 6 p. 4177533. (Proceedings of the IEEE Conference on Decision and Control).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • A semantic importing approach to knowledge reuse from multiple ontologies

    Bao, J., Slutzki, G. & Honavar, V., 2007, AAAI-07/IAAI-07 Proceedings: 22nd AAAI Conference on Artificial Intelligence and the 19th Innovative Applications of Artificial Intelligence Conference. p. 1304-1309 6 p. (Proceedings of the National Conference on Artificial Intelligence; vol. 2).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    25 Scopus citations
  • A service-oriented architecture for electric power transmission system asset management

    Pathak, J., Li, Y., Honavar, V. & McCalley, J., 2007, Service-Oriented Computing ICSOC 2006 - 4th International Conference, Workshops Proceedings. Springer Verlag, p. 26-37 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4652 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    18 Scopus citations
  • Assessing the performance of macromolecular sequence classifiers

    Caragea, C., Sinapov, J., Honavar, V. & Dobbs, D., Dec 1 2007, Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE. p. 320-326 7 p. 4375583. (Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    14 Scopus citations
  • A tableau-based federated reasoning algorithm for modular ontologies

    Bao, J., Caragea, D. & Honavar, V., Jan 1 2006, Proceedings - 2006 IEEE/WIC/ACM International Conference on Web Intelligence (WI 2006 Main Conference Proceedings), WI'06. Institute of Electrical and Electronics Engineers Inc., p. 404-410 7 p. 4061404. (Proceedings - 2006 IEEE/WIC/ACM International Conference on Web Intelligence (WI 2006 Main Conference Proceedings), WI'06).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    20 Scopus citations
  • A tool for collaborative construction of large biological ontologie

    Bao, J., Hu, Z., Caragea, D., Reecy, J. & Honavar, V. G., 2006, Proceedings - 17th International Conference on Database and Expert Systems Applications, DEXA 2006. p. 191-195 5 p. 1698333. (Proceedings - International Workshop on Database and Expert Systems Applications, DEXA).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    12 Scopus citations
  • Attribute value taxonomy generation through matrix based adaptive genetic algorithm

    Jo, H., Na, Y. C., Oh, B., Yang, J. & Honavar, V., Dec 22 2008, Proceedings - 20th IEEE International Conference on Tools with Artificial Intelligence, ICTAI'08. p. 393-400 8 p. 4669716. (Proceedings - International Conference on Tools with Artificial Intelligence, ICTAI; vol. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    8 Scopus citations
  • Automata-based verification of security requirements of composite web services

    Sun, H., Basu, S., Honavar, V. & Lutz, R., 2010, Proceedings - 2010 IEEE 21st International Symposium on Software Reliability Engineering, ISSRE 2010. p. 348-357 10 p. 5635065. (Proceedings - International Symposium on Software Reliability Engineering, ISSRE).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    4 Scopus citations
  • Auto-steered information-decision processes for electric system asset management

    McCalley, J. D., Honavar, V. G., Ryan, S. M., Meeker, W. Q., Roberts, R. A., Qiao, D. & Li, Y., 2006, Computational Science - ICCS 2006: 6th International Conference, Proceedings. Springer Verlag, p. 440-447 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3993 LNCS - III).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    4 Scopus citations
  • AVT-NBL: An algorithm for learning compact and accurate naïve bayes classifiers from attribute value taxonomies and data

    Zhang, J. & Honavar, V., 2004, Proceedings - Fourth IEEE International Conference on Data Mining, ICDM 2004. IEEE Computer Society, p. 289-296 8 p. (Proceedings - Fourth IEEE International Conference on Data Mining, ICDM 2004).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    18 Scopus citations
  • BenSOA: A flexible service-oriented architecture for power system asset management

    Pham, H. Q., Santhanam, G. R., McCalley, J. D. & Honavar, V. G., 2009, 41st North American Power Symposium, NAPS 2009. 5483991. (41st North American Power Symposium, NAPS 2009).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    2 Scopus citations
  • Causal transportability of experiments on controllable subsets of variables: Z-transportability

    Lee, S. & Honavar, V., 2013, Uncertainty in Artificial Intelligence - Proceedings of the 29th Conference, UAI 2013. p. 361-370 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    7 Scopus citations
  • Clustering remote RDF data using SPARQL update queries

    Qi, L., Lin, H. T. & Honavar, V., 2013, 2013 IEEE 29th International Conference on Data Engineering Workshops, ICDEW 2013. p. 236-242 7 p. 6547456. (Proceedings - International Conference on Data Engineering).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    7 Scopus citations
  • Collaborative knowledge acquisition from semantically disparate, distributed data sources

    Honavar, V. & Caragea, D., Dec 22 2006, Proceedings of the 2006 International Symposium on Collaborative Technologies and Systems, CTS 2006. 1644105. (Proceedings of the 2006 International Symposium on Collaborative Technologies and Systems, CTS 2006; vol. 2006).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Combining super-structuring and abstraction on sequence classification

    Silvescu, A., Caragea, C. & Honavar, V., Dec 1 2009, ICDM 2009 - The 9th IEEE International Conference on Data Mining. p. 986-991 6 p. 5360344. (Proceedings - IEEE International Conference on Data Mining, ICDM).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    15 Scopus citations
  • Comparing kernels for predicting protein binding sites from amino acid sequence

    Wu, F., Olson, B., Dobbs, D. & Honavar, V., Dec 1 2006, International Joint Conference on Neural Networks 2006, IJCNN '06. p. 1612-1616 5 p. 1716299. (IEEE International Conference on Neural Networks - Conference Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    8 Scopus citations
  • Complexes of on-line self assembly

    Koul, N., Lathrop, J., Lutz, J. & Honavar, V., Sep 15 2008, 2008 IEEE International Conference on Electro/Information Technology, IEEE EIT 2008 Conference. p. 448-452 5 p. 4554344. (2008 IEEE International Conference on Electro/Information Technology, IEEE EIT 2008 Conference).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Composing web services through automatic reformulation of service specifications

    Pathak, J., Basu, S. & Honavar, V., Sep 19 2008, Proceedings - 2008 IEEE International Conference on Services Computing, SCC 2008. p. 361-369 9 p. 4578483. (Proceedings - 2008 IEEE International Conference on Services Computing, SCC 2008; vol. 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    6 Scopus citations
  • Compositional Stochastic Average Gradient for Machine Learning and Related Applications

    Hsieh, T. Y., EL-Manzalawy, Y., Sun, Y. & Honavar, V., 2018, Intelligent Data Engineering and Automated Learning – IDEAL 2018 - 19th International Conference, Proceedings. Yin, H., Novais, P., Camacho, D. & Tallón-Ballesteros, A. J. (eds.). Springer Verlag, p. 740-752 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11314 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    1 Scopus citations
  • Condition data aggregation with application to failure rate calculation of power transformers

    Pathak, J., Jiang, Y., Honavar, V. & McCalley, J., Oct 17 2006, Proceedings of the 39th Annual Hawaii International Conference on System Sciences, HICSS'06. 1579787. (Proceedings of the Annual Hawaii International Conference on System Sciences; vol. 10).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    34 Scopus citations
  • Constructive neural network learning algorithms

    Parekh, R., Yang, J. & Honavar, V., 1996, Proceedings of the National Conference on Artificial Intelligence. Anon (ed.). AAAI, Vol. 2. p. 1398 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  • Constructive theory refinement in knowledge based neural networks

    Parekh, R. & Honavar, V., 1998, IEEE World Congress on Computational Intelligence. Anon (ed.). IEEE, Vol. 3. p. 2318-2323 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

    11 Scopus citations