Plant Pathology and Environmental Microbiology

  • United States

Research Output

2020

Bacterial brown pit, a new disease of edible mushrooms caused by mycetocola sp.

Hamidizade, M., Taghavi, S. M., Martins, S. J., Herschlag, R. A., Hockett, K. L., Bull, C. T. & Osdaghi, E., May 2020, In : Plant disease. 104, 5, p. 1445-1454 10 p.

Research output: Contribution to journalArticle

Blistering1 modulates penicillium expansum virulence via vesicle-mediated protein secretion

Jurick, W. M., Peng, H., Beard, H. S., Garrett, W. M., Lichtner, F. J., Luciano-Rosario, D., Macarisin, O., Liu, Y., Peter, K. A., Gaskins, V. L., Yang, T., Mowery, J., Bauchan, G., Keller, N. P. & Cooper, B., Jan 1 2020, In : Molecular and Cellular Proteomics. 19, 2, p. 344-361 18 p.

Research output: Contribution to journalArticle

Creeping bentgrass fairway wear resistance by granular topdressing of Ca/Mg-rich liming agents

Pruyne, D. T., Schlossberg, M. J. & Uddin, W., Feb 2020, In : Agriculture (Switzerland). 10, 2, 43.

Research output: Contribution to journalArticle

Open Access

Dissecting the economic impact of soybean diseases in the United States over two decades

Bandara, A. Y., Weerasooriya, D. K., Bradley, C. A., Allen, T. W. & Esker, P. D., Jan 1 2020, In : PloS one. 15, 4, e0231141.

Research output: Contribution to journalArticle

Open Access

Distribution of recently identified bee-infecting viruses in managed honey bee (Apis mellifera) populations in the USA

Ray, A. M., Lopez, D. L., Iturralde Martinez, J. F., Galbraith, D. A., Rose, R., VAN Engelsdorp, D., Rosa, C., Evans, J. D. & Grozinger, C. M., Jan 1 2020, (Accepted/In press) In : Apidologie.

Research output: Contribution to journalArticle

Endophytic Metarhizium robertsii promotes maize growth, suppresses insect growth, and alters plant defense gene expression

Ahmad, I., Jiménez-Gasco, M. D. M., Luthe, D. S., Shakeel, S. N. & Barbercheck, M. E., May 2020, In : Biological Control. 144, 104167.

Research output: Contribution to journalArticle

First report of Fusarium equiseti causing wilt on lentils (Lens culinaris Medik.) in Pakistan

Rafique, K., Rauf, C. A. & Kang, S., May 1 2020, In : Journal of Plant Pathology. 102, 2, 1 p.

Research output: Contribution to journalComment/debate

Open Access

Identification of Pseudomonas isolates associated with bacterial canker of stone fruit trees in the Western Cape, South Africa

Bophela, K. N., Petersen, Y., Carolee, T. B. & Teresa, A. C., Jan 1 2020, In : Plant disease. 104, 3, p. 882-892 11 p.

Research output: Contribution to journalArticle

1 Scopus citations

Metatranscriptomic sequencing of a cyanobacterial soil-surface consortium with and without a diverse underlying soil microbiome

Bell, T. H., Trexler, R. V., Peng, X., Huntemann, M., Clum, A., Foster, B., Foster, B., Roux, S., Palaniappan, K., Varghese, N., Mukherjee, S., Reddy, T. B. K., Daum, C., Copeland, A., Ivanova, N. N., Kyrpides, N. C., Pennacchio, C., Eloe-Fadrosh, E. A. & Bruns, M. A., Jan 2 2020, In : Microbiology Resource Announcements. 9, 1, e01361-19.

Research output: Contribution to journalArticle

Open Access

Modeling yield losses and fungicide profitability for managing Fusarium head blight in Brazilian spring wheat

Duffeck, M. R., dos Santos Alves, K., Machado, F. J., Esker, P. D. & Del Ponte, E. M., Jan 1 2020, In : PHYTOPATHOLOGY. 110, 2, p. 370-378 9 p.

Research output: Contribution to journalArticle

Molecular mechanism underlying mechanical wounding-induced flavonoid accumulation in dalbergia odorifera T. Chen, an endangered tree that produces Chinese Rosewood

Sun, Y., Gao, M., Kang, S., Yang, C., Meng, H., Yang, Y., Zhao, X., Gao, Z., Xu, Y., Jin, Y., Zhao, X., Zhang, Z. & Han, J., May 2020, In : Genes. 11, 5, 478.

Research output: Contribution to journalArticle

Open Access

Predicting CRISPR/Cas9-Induced Mutations for Precise Genome Editing

Molla, K. A. & Yang, Y., Feb 2020, In : Trends in Biotechnology. 38, 2, p. 136-141 6 p.

Research output: Contribution to journalShort survey

1 Scopus citations

The emergence of microbiome centres

Martiny, J. B. H., Whiteson, K. L., Bohannan, B. J. M., David, L. A., Hynson, N. A., McFall-Ngai, M., Rawls, J. F., Schmidt, T. M., Abdo, Z., Blaser, M. J., Bordenstein, S., Bréchot, C., Bull, C. T., Dorrestein, P., Eisen, J. A., Garcia-Pichel, F., Gilbert, J., Hofmockel, K. S., Holtz, M. L., Knight, R. & 8 others, Mark Welch, D. B., McDonald, D., Methé, B., Mouncey, N. J., Mueller, N. T., Pfister, C. A., Proctor, L. & Sachs, J. L., Jan 1 2020, In : Nature Microbiology. 5, 1, p. 2-3 2 p.

Research output: Contribution to journalComment/debate

Open Access

Thrips as the transmission bottleneck for mixed infection of two orthotospoviruses

Zhao, K. & Rosa, C., Apr 2020, In : Plants. 9, 4, 509.

Research output: Contribution to journalArticle

Open Access
2019

100 years since Tolaas: Bacterial blotch of mushrooms in the 21st century

Osdaghi, E., Martins, S. J., Ramos-Sepulveda, L., Vieira, F. R., Pecchia, J. A., Beyer, D. M., Bell, T. H., Yang, Y., Hockett, K. L. & Bull, C. T., Jan 1 2019, In : Plant disease. 103, 11, p. 2714-2732 19 p.

Research output: Contribution to journalReview article

Open Access
5 Scopus citations

A 1,000-year-old RNA virus

Peyambari, M., Warner, S., Stoler, N., Rainer, D. & Roossinck, M. J., Jan 1 2019, In : Journal of virology. 93, 1, e01188-18.

Research output: Contribution to journalArticle

3 Scopus citations

A multiplexed CRISPR/cas9 editing system based on the endogenous tRNA processing

Xie, K. & Yang, Y., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 63-73 11 p. (Methods in Molecular Biology; vol. 1917).

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Scopus citations

Baseline sensitivity of penicillium spp. To difenoconazole

Jurick, W. M., Macarisin, O., Gaskins, V. L., Janisiewicz, W. J., Peter, K. A. & Cox, K. D., Feb 1 2019, In : Plant disease. 103, 2, p. 331-337 7 p.

Research output: Contribution to journalArticle

Characterization of early blight resistance in potato cultivars

Xue, W., Haynes, K. G. & Qu, X., Apr 2019, In : Plant disease. 103, 4, p. 629-637 9 p.

Research output: Contribution to journalArticle

1 Scopus citations

Comparative analysis uncovers the limitations of current molecular detection methods for Fusarium oxysporum f. Sp. Cubense Race 4 strains

Magdama, F., Monserrate-Maggi, L., Serrano, L., Sosa, D., Geiser, D. M. & Jiménez-Gasco, M. D. M., Jan 1 2019, In : PloS one. 14, 9, e0222727.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Corrigendum: Inference of convergent gene acquisition among pseudomonas syringae strains isolated from watermelon, cantaloupe, and squash (Frontiers in Microbiology (2019) 10 (270) DOI: 10.3389/fmicb.2019.00270)

Newberry, E. A., Ebrahim, M., Timilsina, S., Zlatković, N., Obradoví, A., Bull, C. T., Goss, E. M., Huguet-Tapia, J. C., Paret, M. L., Jones, J. B. & Potnis, N., Jan 1 2019, In : Frontiers in Microbiology. 10, MAY, 00963.

Research output: Contribution to journalComment/debate

Open Access

CRISPR/Cas-Mediated Base Editing: Technical Considerations and Practical Applications

Molla, K. A. & Yang, Y., Oct 2019, In : Trends in Biotechnology. 37, 10, p. 1121-1142 22 p.

Research output: Contribution to journalReview article

22 Scopus citations

CRISPR-PLANT v2: an online resource for highly specific guide RNA spacers based on improved off-target analysis

Minkenberg, B., Zhang, J., Xie, K. & Yang, Y., Jan 2019, In : Plant Biotechnology Journal. 17, 1, p. 5-8 4 p.

Research output: Contribution to journalLetter

4 Scopus citations

Determinants of coinfection in the mycoviruses

Thapa, V. & Roossinck, M. J., Jan 1 2019, In : Frontiers in Cellular and Infection Microbiology. 9, MAY, 169.

Research output: Contribution to journalComment/debate

Open Access
1 Scopus citations
5 Scopus citations

Efficacy of Double Nickel LC (Bacillus amyloliquefaciens D747 strain) for management of white mold in snap and dry bean

Pethybridge, S. J., Gugino, B. K. & Kikkert, J. R., Jan 1 2019, In : Plant Health Progress. 20, 1, p. 61-66 6 p.

Research output: Contribution to journalArticle

Erwinia amylovora auxotrophic mutant exometabolomics and virulence on apples

Klee, S. M., Sinn, J. P., Finley, M., Allman, E. L., Smith, P. B., Aimufua, O., Sitther, V., Lehman, B. L., Krawczyk, T., Peter, K. A. & McNellis, T. W., Jan 1 2019, In : Applied and environmental microbiology. 85, 15, e00935-19.

Research output: Contribution to journalArticle

1 Scopus citations

Evolutionary and ecological links between plant and fungal viruses

Roossinck, M. J., Jan 2019, In : New Phytologist. 221, 1, p. 86-92 7 p.

Research output: Contribution to journalReview article

19 Scopus citations

Evolution of the Genes Encoding Effector Candidates Within Multiple Pathotypes of Magnaporthe oryzae

Kim, K. T., Ko, J., Song, H., Choi, G., Kim, H., Jeon, J., Cheong, K., Kang, S. & Lee, Y. H., Nov 6 2019, In : Frontiers in Microbiology. 10, 2575.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Extragenic suppression of elongation factor P gene mutant phenotypes in erwinia amylovora

Klee, S. M., Sinn, J. P., Holmes, A. C., Lehman, B. L., Krawczyk, T., Peter, K. A. & McNellis, T. W., Jan 1 2019, In : Journal of bacteriology. 201, 11, e0072218.

Research output: Contribution to journalArticle

Genetic analysis of resistance to bacterial leaf spot in the heirloom lettuce cultivar Reine des Glaces

Sandoya, G. V., Maisonneuve, B., Truco, M. J., Bull, C. T., Simko, I., Trent, M., Hayes, R. J. & Michelmore, R. W., Dec 1 2019, In : Molecular Breeding. 39, 12, 160.

Research output: Contribution to journalArticle

Genetic diversity and geographic distribution of Bemisia tabaci and Trialeurodes vaporariorum in Costa Rica

Barboza, N. M., Esker, P., Inoue-Nagata, A. K. & Moriones, E., Mar 2019, In : Annals of Applied Biology. 174, 2, p. 248-261 14 p.

Research output: Contribution to journalArticle

1 Scopus citations

Genome sequence of a lethal vascular wilt fungus, verticillium nonalfalfae, a biological control used against the invasive ailanthus altissima

Kasson, M. T., Kasson, L. R., Wickert, K. L., Davis, D. D. & Stajich, J. E., Jan 24 2019, In : Microbiology Resource Announcements. 8, 4, e01619-18.

Research output: Contribution to journalArticle

4 Scopus citations

Impact of Ammonia During Composting on Calonectria pseudonaviculata and C. henricotiae, Causal Agents of Boxwood Blight

Harvey, R. J., Shishkoff, N., Pecchia, J. A. & Davis, D. D., Apr 3 2019, In : Compost Science and Utilization. 27, 2, p. 116-123 8 p.

Research output: Contribution to journalArticle

Impact of cultivated hosts on the recombination of cucumber mosaic virus

Ouedraogo, R. S., Pita, J. S., Somda, I. P., Traore, O. & Roossinck, M. J., Jan 1 2019, In : Journal of virology. 93, 7, e01770.

Research output: Contribution to journalArticle

1 Scopus citations

Inference of convergent gene acquisition among Pseudomonas syringae strains isolated from watermelon, cantaloupe, and squash

Newberry, E. A., Ebrahim, M., Timilsina, S., Zlatković, N., Obradović, A., Bull, C. T., Goss, E. M., Huguet-Tapia, J. C., Paret, M. L., Jones, J. B. & Potnis, N., Jan 1 2019, In : Frontiers in Microbiology. 10, FEB, 270.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Innovative Technologies Can Improve Understanding of Microbial Nitrogen Dynamics in Agricultural Soils

Cloutier, M. L., Bhowmik, A., Bell, T. H. & Bruns, M. A., Jan 1 2019, In : Agricultural and Environmental Letters. 4, 1, p. 1-6 6 p.

Research output: Contribution to journalComment/debate

Open Access

Localized recombination drives diversification of killing spectra for phage-derived syringacins

Baltrus, D. A., Clark, M., Smith, C. & Hockett, K. L., Feb 1 2019, In : ISME Journal. 13, 2, p. 237-249 13 p.

Research output: Contribution to journalArticle

1 Scopus citations

Manipulating Wild and Tamed Phytobiomes: Challenges and Opportunities

Bell, T. H., Hockett, K., Alcalá-Briseño, R. I., Barbercheck, M., Beattie, G. A., Bruns, M. A., Carlson, J., Chung, T., Collins, A., Emmett, B., Esker, P., Garrett, K., Glenna, L., Gugino, B. K., Jimenez Gasco, M. D. M., Kinkel, L., Kovac, J., Kowalski, K., Kuldau, G., Leveau, J. & 10 others, Michalska-Smith, M., Myrick, J., Peter, K., Salazar, M. V., Shade, A., Stopnisek, N., Tan, X., Welty, A., Wickings, K. & Yergeau, E., Mar 13 2019, In : Phytobiomes Journal.

Research output: Contribution to journalArticle

2 Scopus citations

Manipulation of aphid behavior by a persistent plant virus

Safari, M., Ferrari, M. J. & Roossinck, M. J., May 1 2019, In : Journal of virology. 93, 9, e01781-18.

Research output: Contribution to journalArticle

6 Scopus citations

Mushroom sciarid fly, Lycoriella ingenua (Diptera: Sciaridae) adults and larvae vector Mushroom Green Mold (Trichoderma aggressivum ft. aggressivum) spores

Mazin, M., Harvey, R., Andreadis, S., Pecchia, J., Cloonan, K. & Rajotte, E. G., Nov 1 2019, In : Applied Entomology and Zoology. 54, 4, p. 369-376 8 p.

Research output: Contribution to journalArticle

Neonicotinoid seed treatments of soybean provide negligible benefits to US farmers

Mourtzinis, S., Krupke, C. H., Esker, P. D., Varenhorst, A., Arneson, N. J., Bradley, C. A., Byrne, A. M., Chilvers, M. I., Giesler, L. J., Herbert, A., Kandel, Y. R., Kazula, M. J., Hunt, C., Lindsey, L. E., Malone, S., Mueller, D. S., Naeve, S., Nafziger, E., Reisig, D. D., Ross, W. J. & 3 others, Rossman, D. R., Taylor, S. & Conley, S. P., Dec 1 2019, In : Scientific reports. 9, 1, 11207.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Optimizing fungicide timing for the management of white mold in processing snap bean in New York

Pethybridge, S. J., Gugino, B. K. & Kikkert, J. R., Nov 2019, In : Crop Protection. 125, 104883.

Research output: Contribution to journalArticle

Parasitic Wasp Mediates Plant Perception of Insect Herbivores

Tan, C. W., Peiffer, M., Hoover, K., Rosa, C. & Felton, G. W., Dec 1 2019, In : Journal of Chemical Ecology. 45, 11-12, p. 972-981 10 p.

Research output: Contribution to journalArticle

Perennial ryegrass wear resistance and soil amendment by Ca- And Mg-silicates

Pruyne, D. T., Schlossberg, M. J. & Uddin, W., Sep 25 2019, In : Agronomy. 9, 10, 578.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Physicochemical characterization of composts for the cultivation of Pleurotus ostreatus

Zanon, A. R., De Jesus, J. P. F., Vieira, F. R., Martins, O. G. & De Andrade, M. C. N., Jan 1 2019, In : Revista em Agronegocio e Meio Ambiente. 12, 3, p. 1167-1181 15 p.

Research output: Contribution to journalArticle

Open Access

Request for revision of the statutes of the international committee on systematics of prokaryotes

Whitman, W. B., Bull, C. T., Busse, H. J., Fournier, P. E., Oren, A. & Ventura, S., Feb 1 2019, In : International journal of systematic and evolutionary microbiology. 69, 2, p. 584-593 10 p., 003117.

Research output: Contribution to journalArticle

1 Scopus citations

Root cortical anatomy is associated with differential pathogenic and symbiotic fungal colonization in maize

Galindo-Castañeda, T., Brown, K. M., Kuldau, G. A., Roth, G. W., Wenner, N. G., Ray, S., Schneider, H. & Lynch, J. P., Nov 1 2019, In : Plant Cell and Environment. 42, 11, p. 2999-3014 16 p.

Research output: Contribution to journalArticle

1 Scopus citations