Plant Pathology and Environmental Microbiology

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A 1,000-year-old RNA virus

Peyambari, M., Warner, S., Stoler, N., Rainer, D. & Roossinck, M. J., Jan 1 2019, In : Journal of virology. 93, 1, e01188-18.

Research output: Contribution to journalArticle

3 Scopus citations

Abscisic acid-induced resistance against the brown spot pathogen Cochliobolus miyabeanus in rice involves MAP kinase-mediated repression of ethylene signaling

de Vleesschauwer, D., Yang, Y., Cruz, C. V. & Höfte, M., Apr 2010, In : Plant physiology. 152, 4, p. 2036-2052 17 p.

Research output: Contribution to journalArticle

114 Scopus citations

A comparison of several dose-response models based on laboratory exposures of tree seedlings to sulfur dioxide

Umbach, D. M., Davis, D. D. & Pennypacker, S. P., Nov 1983, In : Journal of the Air Pollution Control Association. 33, 11, p. 1073-1079 7 p.

Research output: Contribution to journalArticle

3 Scopus citations

A coordinated effort to manage soybean rust in North America: A success story in soybean disease monitoring

Sikora, E. J., Allen, T. W., Wise, K. A., Bergstrom, G., Bradley, C. A., Bond, J., Brown-Rytlewski, D., Chilvers, M., Damicone, J., DeWolf, E., Dorrance, A., Dufault, N., Esker, P., Faske, T. R., Giesler, L., Goldberg, N., Golod, J., Gómez, I. R. G., Grau, C., Grybauskas, A. & 36 others, Franc, G., Hammerschmidt, R., Hartman, G. L., Henn, R. A., Hershman, D., Hollier, C., Isakeit, T., Isard, S., Jacobsen, B., Jardine, D., Kemerait, R., Koenning, S., Langham, M., Malvick, D., Markell, S., Marois, J. J., Monfort, S., Mueller, D., Mueller, J., Mulrooney, R., Newman, M., Osborne, L., Padgett, G. B., Ruden, B. E., Rupe, J., Schneider, R., Schwartz, H., Shaner, G., Singh, S., Stromberg, E., Sweets, L., Tenuta, A., Vaiciunas, S., Yang, X. B., Young-Kelly, H. & Zidek, J., 2014, In : Plant disease. 98, 7, p. 864-875 12 p.

Research output: Contribution to journalArticle

24 Scopus citations

Adaptation of the Western Corn Rootworm to crop rotation: Evolution of a new strain in response to a management practice

Levine, E., Spencer, J. L., Isard, S. A., Onstad, D. W. & Gray, M. E., Jun 1 2002, In : American Entomologist. 48, 2, p. 94-107 14 p.

Research output: Contribution to journalArticle

234 Scopus citations

A diverse soil microbiome degrades more crude oil than specialized bacterial assemblages obtained in culture

Bell, T. H., Stefani, F. O. P., Abram, K., Champagne, J., Yergeau, E., Hijri, M. & St-Arnaud, M., Jan 1 2016, In : Applied and environmental microbiology. 82, 18, p. 5530-5541 12 p.

Research output: Contribution to journalArticle

20 Scopus citations

A dual selection based, targeted gene replacement tool for Magnaporthe grisea and Fusarium oxysporum

Chang, H. K., Park, S. Y., Lee, Y. H. & Kang, S., Jun 1 2005, In : Fungal Genetics and Biology. 42, 6, p. 483-492 10 p.

Research output: Contribution to journalArticle

93 Scopus citations

Adult plant evaluation of soybean accessions for resistance to Phakopsora pachyrhizi in the field and greenhouse in Paraguay

Miles, M. R., Morel, W., Ray, J. D., Smith, J. R., Frederick, R. D. & Hartman, G. L., Jan 1 2008, In : Plant disease. 92, 1, p. 96-105 10 p.

Research output: Contribution to journalArticle

40 Scopus citations

Aerial movement of western corn rootworm (Coleoptera: Chrysomelidae): Diel periodicity of flight activity in soybean fields

Isard, S. A., Spencer, J. L., Nasser, M. A. & Levine, E., Jan 1 2000, In : Environmental Entomology. 29, 2, p. 226-234 9 p.

Research output: Contribution to journalArticle

35 Scopus citations

A five-gene phylogeny of Pezizomycotina

Spatafora, J. W., Sung, G. H., Johnson, D., Hesse, C., O'Rourke, B., Serdani, M., Spotts, R., Lutzoni, F., Hofstetter, V., Miadlikowska, J., Reeb, V., Gueidan, C., Fraker, E., Lumbsch, T., Lücking, R., Schmitt, I., Hosaka, K., Aptroot, A., Roux, C., Miller, A. N. & 13 others, Geiser, D. M., Hafellner, J., Hestmark, G., Arnold, A. E., Büdel, B., Rauhut, A., Hewitt, D., Untereiner, W. A., Cole, M. S., Scheidegger, C., Schultz, M., Sipman, H. & Schoch, C. L., Nov 2006, In : Mycologia. 98, 6, p. 1018-1028 11 p.

Research output: Contribution to journalArticle

226 Scopus citations

Aflatoxin, fumonisin and Shiga toxin-producing Escherichia coli infections in calves and the effectiveness of celmanax®/dairyman's choice™ applications to eliminate morbidity and mortality losses

Baines, D., Sumarah, M., Kuldau, G., Juba, J., Mazza, A. & Masson, L., Oct 2013, In : Toxins. 5, 10, p. 1872-1895 24 p.

Research output: Contribution to journalArticle

7 Scopus citations

Agrobacterium-mediated transformation of Fusarium oxysporum: An efficient tool for insertional mutagenesis and gene transfer

Mullins, E. D., Chen, X., Romaine, P., Raina, R., Geiser, D. M. & Kang, S., 2001, In : PHYTOPATHOLOGY. 91, 2, p. 173-180 8 p.

Research output: Contribution to journalArticle

433 Scopus citations

Agrobacterium tumefaciens-mediated transformation of the lichen fungus, Umbilicaria muehlenbergii

Park, S. Y., Jeong, M. H., Wang, H. Y., Kim, J. A., Yu, N. H., Kim, S., Cheong, Y. H., Kang, S., Lee, Y. H. & Hur, J. S., Dec 30 2013, In : PloS one. 8, 12, e83896.

Research output: Contribution to journalArticle

24 Scopus citations

Agrobacterium tumefaciens-mediated transformation of the plant pathogenic fungus, Magnaporthe grisea.

Rho, H. S., Kang, S. & Lee, Y. H., Dec 31 2001, In : Molecules and cells. 12, 3, p. 407-411 5 p.

Research output: Contribution to journalArticle

172 Scopus citations

A higher-level phylogenetic classification of the Fungi

Hibbett, D. S., Binder, M., Bischoff, J. F., Blackwell, M., Cannon, P. F., Eriksson, O. E., Huhndorf, S., James, T., Kirk, P. M., Lücking, R., Thorsten Lumbsch, H., Lutzoni, F., Matheny, P. B., McLaughlin, D. J., Powell, M. J., Redhead, S., Schoch, C. L., Spatafora, J. W., Stalpers, J. A., Vilgalys, R. & 47 others, Aime, M. C., Aptroot, A., Bauer, R., Begerow, D., Benny, G. L., Castlebury, L. A., Crous, P. W., Dai, Y. C., Gams, W., Geiser, D. M., Griffith, G. W., Gueidan, C., Hawksworth, D. L., Hestmark, G., Hosaka, K., Humber, R. A., Hyde, K. D., Ironside, J. E., Kõljalg, U., Kurtzman, C. P., Larsson, K. H., Lichtwardt, R., Longcore, J., Miadlikowska, J., Miller, A., Moncalvo, J. M., Mozley-Standridge, S., Oberwinkler, F., Parmasto, E., Reeb, V., Rogers, J. D., Roux, C., Ryvarden, L., Sampaio, J. P., Schüßler, A., Sugiyama, J., Thorn, R. G., Tibell, L., Untereiner, W. A., Walker, C., Wang, Z., Weir, A., Weiss, M., White, M. M., Winka, K., Yao, Y. J. & Zhang, N., May 2007, In : Mycological Research. 111, 5, p. 509-547 39 p.

Research output: Contribution to journalArticle

1361 Scopus citations

A humidity-sensitive Arabidopsis copine mutant exhibits precocious cell death and increased disease resistance

Jambunathan, N., Siani, J. M. & McNellis, T. W., Nov 20 2001, In : Plant Cell. 13, 10, p. 2225-2240 16 p.

Research output: Contribution to journalArticle

136 Scopus citations

Ailanthus altissima wilt and mortality: Etiology

Schall, M. J. & Davis, D. D., Jul 1 2009, In : Plant disease. 93, 7, p. 747-751 5 p.

Research output: Contribution to journalArticle

23 Scopus citations

Alpine vegetation classification using high resolution aerial imagery and topoclimatic index values.

Frank, T. D. & Isard, S. A., Jan 1 1986, In : Photogrammetric Engineering & Remote Sensing. 52, 3, p. 381-388 8 p.

Research output: Contribution to journalArticle

15 Scopus citations

Alteration of microbial community structure affects diesel biodegradation in an Arctic soil

Bell, T. H., Yergeau, E., Juck, D. F., Whyte, L. G. & Greer, C. W., Jul 2013, In : FEMS microbiology ecology. 85, 1, p. 51-61 11 p.

Research output: Contribution to journalArticle

33 Scopus citations

A metagenomic survey of microbes in honey bee colony collapse disorder

Cox-Foster, D. L., Conlan, S., Holmes, E. C., Palacios, G., Evans, J. D., Moran, N. A., Quan, P. L., Briese, T., Hornig, M., Geiser, D. M., Martinson, V., VanEngelsdorp, D., Kalkstein, A. L., Drysdale, A., Hui, J., Zhai, J., Cui, L., Hutchison, S. K., Simons, J. F., Egholm, M. & 2 others, Pettis, J. S. & Lipkin, W. I., Oct 12 2007, In : Science. 318, 5848, p. 283-287 5 p.

Research output: Contribution to journalArticle

1139 Scopus citations

A method for inoculation and evaluation of rice sheath blight disease

Park, D. S., Sayler, R. J., Hong, Y. G., Nam, M. H. & Yang, Y., Jan 1 2008, In : Plant disease. 92, 1, p. 25-29 5 p.

Research output: Contribution to journalArticle

61 Scopus citations

Amplified fragment length polymorphism analysis and internal transcribed spacer and coxII sequences reveal a species boundary within Pythium irregulare

Garzón, C. D., Geiser, D. M. & Moorman, G. W., Dec 1 2005, In : PHYTOPATHOLOGY. 95, 12, p. 1489-1498 10 p.

Research output: Contribution to journalArticle

26 Scopus citations

A multi-locus phylogeny for Phytophthora utilizing markers derived from complete genome sequences

Blair, J. E., Coffey, M. D., Park, S. Y., Geiser, D. M. & Kang, S., Mar 1 2008, In : Fungal Genetics and Biology. 45, 3, p. 266-277 12 p.

Research output: Contribution to journalArticle

303 Scopus citations

A multi-variate statistical model integrating passive sampler and meteorology data to predict the frequency distributions of hourly ambient ozone (O3) concentrations

Krupa, S., Nosal, M., Ferdinand, J. A., Stevenson, R. E. & Skelly, J. M., Jul 1 2003, In : Environmental Pollution. 124, 1, p. 173-178 6 p.

Research output: Contribution to journalArticle

37 Scopus citations

An adaptive evolutionary shift in Fusarium head blight pathogen populations is driving the rapid spread of more toxigenic Fusarium graminearum in North America

Ward, T. J., Clear, R. M., Rooney, A. P., O'Donnell, K., Gaba, D., Patrick, S., Starkey, D. E., Gilbert, J., Geiser, D. M. & Nowicki, T. W., Apr 1 2008, In : Fungal Genetics and Biology. 45, 4, p. 473-484 12 p.

Research output: Contribution to journalArticle

310 Scopus citations
12 Scopus citations

Analysis of fresh mushroom compost

Fidanza, M. A., Sanford, D. L., Beyer, D. M. & Aurentz, D. J., Apr 2010, In : HortTechnology. 20, 2, p. 449-453 5 p.

Research output: Contribution to journalArticle

Open Access
17 Scopus citations

Analysis of genetic bottlenecks during horizontal transmission of Cucumber Mosaic Virus

Ali, A., Li, H., Schneider, W. L., Sherman, D. J., Gray, S., Smith, D. & Roossinck, M. J., Sep 2006, In : Journal of virology. 80, 17, p. 8345-8350 6 p.

Research output: Contribution to journalArticle

108 Scopus citations

Analysis of the complete mitochondrial genome sequences of the soybean rust pathogens Phakopsora pachyrhizi and P. meibomiae

Stone, C. L., Buitrago, M. L. P., Boore, J. L. & Frederick, R. D., Jul 2010, In : Mycologia. 102, 4, p. 887-897 11 p.

Research output: Contribution to journalArticle

18 Scopus citations

An assessment model for rating high-threat crop pathogens

Schaad, N. W., Abrams, J., Madden, L. V., Frederick, R. D., Luster, D. G., Damsteegt, V. D. & Vidaver, A. K., Jun 2006, In : PHYTOPATHOLOGY. 96, 6, p. 616-621 6 p.

Research output: Contribution to journalArticle

14 Scopus citations

An ephemeral sexual population of Phytophthora infestans in the Northeastern United States and Canada

Danies, G., Myers, K., Mideros, M. F., Restrepo, S., Martin, F. N., Cooke, D. E. L., Smart, C. D., Ristaino, J. B., Seaman, A. J., Gugino, B. K., Grünwald, N. J. & Fry, W. E., 2014, In : PloS one. 9, 12, p. e116354

Research output: Contribution to journalArticle

26 Scopus citations

An Erwinia amylovora yjeK mutant exhibits reduced virulence, increased chemical sensitivity and numerous environmentally dependent proteomic alterations

Klee, S. M., Mostafa, I., Chen, S., Dufresne, C., Lehman, B. L., Sinn, J. P., Peter, K. A. & McNellis, T. W., Jul 2018, In : Molecular plant pathology. 19, 7, p. 1667-1678 12 p.

Research output: Contribution to journalArticle

7 Scopus citations

A new look at plant viruses and their potential beneficial roles in crops

Roossinck, M. J., May 1 2015, In : Molecular plant pathology. 16, 4, p. 331-333 3 p.

Research output: Contribution to journalArticle

15 Scopus citations

A new pathovar, Pseudomonas syringae pv. alisalensis pv. nov., proposed for the causal agent of bacterial blight of broccoli and broccoli raab

Cintas, N. A., Koike, S. T. & Bull, C. T., Sep 2002, In : Plant disease. 86, 9, p. 992-998 7 p.

Research output: Contribution to journalArticle

46 Scopus citations
11 Scopus citations

Angular leaf spot of cucurbits is associated with genetically diverse pseudomonas syringae strains

Newberry, E. A., Jardini, T. M., Rubio, I., Roberts, P. D., Babu, B., Koike, S. T., Bouzar, H., Goss, E. M., Jones, J. B., Bull, C. T. & Paret, M. L., Jul 2016, In : Plant disease. 100, 7, p. 1397-1404 8 p.

Research output: Contribution to journalArticle

12 Scopus citations

An ice nucleation reporter gene system: Identification of inducible pathogenicity genes in Pseudomonas syringae pv. phaseolicola

Lindgren, P. B., Frederick, R., Govindarajan, A. G., Panopoulos, N. J., Staskawicz, B. J. & Lindow, S. E., Jan 1 1989, In : EMBO Journal. 8, 5, p. 1291-1301 11 p.

Research output: Contribution to journalArticle

77 Scopus citations

An immunofluorescence assay to detect urediniospores of Phakopsora pachyrhizi

Baysal-Gurel, F., Lewis Ivey, M. L., Dorrance, A., Luster, D., Frederick, R., Czarnecki, J., Boehm, M. & Miller, S. A., Oct 2008, In : Plant disease. 92, 10, p. 1387-1393 7 p.

Research output: Contribution to journalArticle

13 Scopus citations

An inordinate fondness for Fusarium: Phylogenetic diversity of fusaria cultivated by ambrosia beetles in the genus Euwallacea on avocado and other plant hosts

Kasson, M. T., O'Donnell, K., Rooney, A. P., Sink, S., Ploetz, R. C., Ploetz, J. N., Konkol, J. L., Carrillo, D., Freeman, S., Mendel, Z., Smith, J. A., Black, A. W., Hulcr, J., Bateman, C., Stefkova, K., Campbell, P. R., Geering, A. D. W., Dann, E. K., Eskalen, A., Mohotti, K. & 5 others, Short, D. P. G., Aoki, T., Fenstermacher, K. A., Davis, D. D. & Geiser, D. M., Jul 1 2013, In : Fungal Genetics and Biology. 56, p. 147-157 11 p.

Research output: Contribution to journalArticle

84 Scopus citations

An IPM program for managing fungal leaf blight diseases of carrot in New York

Gugino, B. K., Carroll, J. E., Widmer, T. L., Chen, P. & Abawi, G. S., Jan 1 2007, In : Plant disease. 91, 1, p. 59-65 7 p.

Research output: Contribution to journalArticle

4 Scopus citations

An observational study of the influence of the Great Lakes on the speed and intensity of passing cyclones

Angel, J. R. & Isard, S. A., Sep 1997, In : Monthly Weather Review. 125, 9, p. 2228-2237 10 p.

Research output: Contribution to journalArticle

30 Scopus citations

An on-farm bioassay for assessing Meloidogyne hapla infestations as a decision management tool

Gugino, B. K., Ludwig, J. W. & Abawi, G. S., Mar 1 2008, In : Crop Protection. 27, 3-5, p. 785-791 7 p.

Research output: Contribution to journalArticle

9 Scopus citations

A novel jasmonic acid-inducible rice Myb gene associates with fungal infection and host cell death

Lee, M. W., Qi, M. & Yang, Y., Jan 1 2001, In : Molecular Plant-Microbe Interactions. 14, 4, p. 527-535 9 p.

Research output: Contribution to journalArticle

167 Scopus citations

Antimicrobial activity of a porcine myeloperoxidase against plant pathogenic bacteria and fungi

Yang, Y. & Anderson, E. J., Jan 1 1999, In : Journal of Applied Microbiology. 86, 2, p. 211-220 10 p.

Research output: Contribution to journalArticle

33 Scopus citations

An Xanthomonas citri pathogenicity gene, pthA, pleiotropically encodes gratuitous avirulence on nonhosts.

Swarup, S., Yang, Y., Kingsley, M. T. & Gabriel, D. W., Jan 1 1992, In : Molecular plant-microbe interactions : MPMI. 5, 3, p. 204-213 10 p.

Research output: Contribution to journalArticle

150 Scopus citations

A physically based theoretical model of spore deposition for predicting spread of plant diseases

Isard, S. A. & Chamecki, M., Mar 2016, In : PHYTOPATHOLOGY. 106, 3, p. 244-253 10 p.

Research output: Contribution to journalArticle

2 Scopus citations

A portable rainfall simulator for evaluating the wet deposition of plant pathogens

Dufault, N. S. & Isard, S. A., Mar 16 2010, In : Applied Engineering in Agriculture. 26, 1, p. 71-78 8 p.

Research output: Contribution to journalArticle

6 Scopus citations

Application of a rank-based method for improved cultivar selection in soft red winter wheat

Lackermann, K. V. & Esker, P. D., Nov 1 2011, In : Plant disease. 95, 11, p. 1407-1413 7 p.

Research output: Contribution to journalArticle

1 Scopus citations

Application of silicon sources increases silicon accumulation in perennial ryegrass turf on two soil types

Nanayakkara, U. N., Uddin, W. & Datnoff, L. E., Feb 1 2008, In : Plant and Soil. 303, 1-2, p. 83-94 12 p.

Research output: Contribution to journalArticle

24 Scopus citations

A prebiotic, Celmanax, decreases Escherichia coli O157:H7 colonization of bovine cells and feed-associated cytotoxicity in vitro

Baines, D., Erb, S., Lowe, R., Turkington, K., Sabau, E., Kuldau, G. A., Juba, J., Masson, L., Mazza, A. & Roberts, R., Apr 11 2011, In : BMC Research Notes. 4, 110.

Research output: Contribution to journalArticle

9 Scopus citations