Plant Pathology and Environmental Microbiology

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Genetic diversity of Sclerotinia homoeocarpa isolates from turfgrasses from various regions in north America

Viji, G., Uddin, W., O'Neill, N. R., Mischke, S. & Saunders, J. A., Nov 2004, In : Plant disease. 88, 11, p. 1269-1276 8 p.

Research output: Contribution to journalArticle

19 Scopus citations

Genetic gain × management interactions in soybean: II. nitrogen utilization

Wilson, E. W., Rowntree, S. C., Suhre, J. J., Weidenbenner, N. H., Conley, S. P., Davis, V. M., Diers, B. W., Esker, P. D., Naeve, S. L., Specht, J. E. & Casteel, S. N., Jan 1 2014, In : Crop Science. 54, 1, p. 340-348 9 p.

Research output: Contribution to journalArticle

23 Scopus citations

Genetic gain × management interactions in soybean: I. Planting date

Rowntree, S. C., Suhre, J. J., Weidenbenner, N. H., Wilson, E. W., Davis, V. M., Naeve, S. L., Casteel, S. N., Diers, B. W., Esker, P. D., Specht, J. E. & Conley, S. P., May 1 2013, In : Crop Science. 53, 3, p. 1128-1138 11 p.

Research output: Contribution to journalArticle

47 Scopus citations

Genetic loci controlling lethal cell death in tomato caused by viral satellite RNA infection

Xu, P., Wang, H., Coker, F., Ma, J. Y. I., Tang, Y., Taylor, M. & Roossinck, M. J., Aug 1 2012, In : Molecular Plant-Microbe Interactions. 25, 8, p. 1034-1044 11 p.

Research output: Contribution to journalArticle

3 Scopus citations

Genetics and mapping of adult plant rust resistance in soybean PI 587886 and PI 587880A

Ray, J. D., Morel, W., Smith, J. R., Frederick, R. D. & Miles, M. R., Jul 1 2009, In : Theoretical and Applied Genetics. 119, 2, p. 271-280 10 p.

Research output: Contribution to journalArticle

44 Scopus citations

Genetic stability of Magnaporthe oryzae during successive passages through rice plants and on artificial medium

Park, S. Y., Chi, M. H., Milgroom, M. G., Kim, H., Han, S. S., Kang, S. & Lee, Y. H., Dec 1 2010, In : Plant Pathology Journal. 26, 4, p. 313-320 8 p.

Research output: Contribution to journalArticle

9 Scopus citations

Genetic variation and phylogeny of Spongospora subterranea f.sp. subterranea based on ribosomal DNA sequence analysis

Qu, X. & Christ, B. J., Jan 1 2004, In : American Journal of Potato Research. 81, 6, p. 385-394 10 p.

Research output: Contribution to journalArticle

16 Scopus citations

Genetic variation within clonal lineages of phytophthora infestans revealed through genotyping-by-sequencing, and implications for late blight epidemiology

Hansen, Z. R., Everts, K. L., Fry, W. E., Gevens, A. J., Grünwald, N. J., Gugino, B. K., Johnson, D. A., Johnson, S. B., Judelson, H. S., Knaus, B. J., McGrath, M. T., Myers, K. L., Ristaino, J. B., Roberts, P. D., Secor, G. A. & Smart, C. D., Nov 2016, In : PloS one. 11, 11, e0165690.

Research output: Contribution to journalArticle

7 Scopus citations

Gene Transcription Analysis during Interaction between Potato and Ralstonia solanacearum1

Li, G. C., Jin, L. P., Wang, X. W., Xie, K. Y., Yang, Y., van der Vossen, E. A. G., Huang, S. W. & Qu, D. Y., Sep 9 2010, In : Russian Journal of Plant Physiology. 57, 5, p. 685-695 11 p.

Research output: Contribution to journalArticle

4 Scopus citations

Genome-based evolutionary history of Pseudomonas spp

Hesse, C., Schulz, F., Bull, C. T., Shaffer, B. T., Yan, Q., Shapiro, N., Hassan, K. A., Varghese, N., Elbourne, L. D. H., Paulsen, I. T., Kyrpides, N., Woyke, T. & Loper, J. E., Jun 2018, In : Environmental microbiology. 20, 6, p. 2142-2159 18 p.

Research output: Contribution to journalArticle

16 Scopus citations

Genome organization and evolution of the AVR-pita avirulence gene family in the Magnaporthe grisea species complex

Chang, H. K., Park, S. Y., Lee, Y. H., Valent, B. & Kang, S., May 1 2008, In : Molecular Plant-Microbe Interactions. 21, 5, p. 658-670 13 p.

Research output: Contribution to journalArticle

72 Scopus citations

Genome sequence of a lethal vascular wilt fungus, verticillium nonalfalfae, a biological control used against the invasive ailanthus altissima

Kasson, M. T., Kasson, L. R., Wickert, K. L., Davis, D. D. & Stajich, J. E., Jan 24 2019, In : Microbiology Resource Announcements. 8, 4, e01619-18.

Research output: Contribution to journalArticle

4 Scopus citations

Genome sequence of fusarium isolate MYA-4552 from the midgut of Anoplophora glabripennis, an invasive, wood-boring beetle

Herr, J. R., Scully, E. D., Geib, S. M., Hoover, K., Carlson, J. E. & Geiser, D. M., Jan 1 2016, In : Genome Announcements. 4, 4, e00544-16.

Research output: Contribution to journalArticle

6 Scopus citations

Genome sizes of Epichloe species and anamorphic hybrids

Kuldau, G. A., Tsai, H. F. & Schardl, C. L., Jan 1 1999, In : Mycologia. 91, 5, p. 776-782 7 p.

Research output: Contribution to journalArticle

62 Scopus citations

Genome-wide analysis of T-DNA integration into the chromosomes of Magnaporthe oryzae

Choi, J., Park, J., Jeon, J., Chi, M. H., Goh, J., Yoo, S. Y., Park, J., Jung, K., Kim, H., Park, S. Y., Rho, H. S., Kim, S., Kim, B. R., Han, S. S., Kang, S. & Lee, Y. H., Oct 1 2007, In : Molecular Microbiology. 66, 2, p. 371-382 12 p.

Research output: Contribution to journalArticle

59 Scopus citations

Genome-wide functional analysis of pathogenicity genes in the rice blast fungus

Jeon, J., Park, S. Y., Chi, M. H., Choi, J., Park, J., Rho, H. S., Kim, S., Goh, J., Yoo, S., Choi, J., Park, J. Y., Yi, M., Yang, S., Kwon, M. J., Han, S. S., Kim, B. R., Khang, C. H., Park, B., Lim, S. E., Jung, K. & 10 others, Kong, S., Karunakaran, M., Oh, H. S., Kim, H., Kim, S., Park, J., Kang, S., Choi, W. B., Kang, S. & Lee, Y. H., Apr 1 2007, In : Nature Genetics. 39, 4, p. 561-565 5 p.

Research output: Contribution to journalArticle

161 Scopus citations

Gibberella xylarioides (anamorph: Fusarium xylarioides), a causative agent of coffee wilt disease in Africa, is a previously unrecognized member of the G. fujikuroi species complex

Geiser, D. M., Lewis Ivey, M. L., Hakiza, G., Juba, J. H. & Miller, S. A., Jan 1 2005, In : Mycologia. 97, 1, p. 191-201 11 p.

Research output: Contribution to journalArticle

54 Scopus citations

Global Expression Profiling of Transcription Factor Genes Provides New Insights into Pathogenicity and Stress Responses in the Rice Blast Fungus

Park, S. Y., Choi, J., Lim, S. E., Lee, G. W., Park, J., Kim, Y., Kong, S., Kim, S. R., Rho, H. S., Jeon, J., Chi, M. H., Kim, S., Khang, C. H., Kang, S. & Lee, Y. H., Jun 1 2013, In : PLoS pathogens. 9, 6, e1003350.

Research output: Contribution to journalArticle

35 Scopus citations

Global molecular surveillance reveals novel Fusarium head blight species and trichothecene toxin diversity

Starkey, D. E., Ward, T. J., Aoki, T., Gale, L. R., Kistler, H. C., Geiser, D. M., Suga, H., Tóth, B., Varga, J. & O'Donnell, K., Nov 1 2007, In : Fungal Genetics and Biology. 44, 11, p. 1191-1204 14 p.

Research output: Contribution to journalArticle

287 Scopus citations

Glucocorticoid-inducible expression of a bacterial avirulence gene in transgenic ARABIDOPSIS INDUCES Hypersensitive cell death

McNellis, T. W., Mudgett, M. B., Li, K., Aoyama, T., Horvath, D., Chua, N. H. & Staskawicz, B. J., Jan 1 1998, In : Plant Journal. 14, 2, p. 247-257 11 p.

Research output: Contribution to journalArticle

120 Scopus citations

Grouping of populations of Heterodera trifolii by host preference and AFLP pattern

Wang, S., Riggs, R. D. & Yang, Y., Dec 1 2001, In : Nematology. 3, 7, p. 667-674 8 p.

Research output: Contribution to journalArticle

5 Scopus citations

Growth variation of white oak subjected to historic levels of fluctuating air pollution

Long, R. P. & Davis, D. D., Aug 1 1999, In : Environmental Pollution. 106, 2, p. 193-202 10 p.

Research output: Contribution to journalArticle

6 Scopus citations

Gut microbes contribute to nitrogen provisioning in a wood-feeding cerambycid

Ayayee, P., Rosa, C., Ferry, J. G., Felton, G., Saunders, M. C. & Hoover, K., Jan 1 2014, In : Environmental Entomology. 43, 4, p. 903-912 10 p.

Research output: Contribution to journalArticle

27 Scopus citations

Helicoverpa zea gut-associated bacteria indirectly induce defenses in tomato by triggering a salivary elicitor(s)

Wang, J., Peiffer, M., Hoover, K., Rosa, C., Zeng, R. & Felton, G. W., May 1 2017, In : New Phytologist. 214, 3, p. 1294-1306 13 p.

Research output: Contribution to journalArticle

27 Scopus citations

Herbivore exploits orally secreted bacteria to suppress plant defenses

Chung, S. H., Rosa, C., Scully, E. D., Peiffer, M., Tooker, J. F., Hoover, K., Luthe, D. S. & Felton, G. W., Sep 24 2013, In : Proceedings of the National Academy of Sciences of the United States of America. 110, 39, p. 15728-15733 6 p.

Research output: Contribution to journalArticle

209 Scopus citations

Herbivore Oral Secreted Bacteria Trigger Distinct Defense Responses in Preferred and Non-Preferred Host Plants

Wang, J., Chung, S. H., Peiffer, M., Rosa, C., Hoover, K., Zeng, R. & Felton, G. W., Jun 1 2016, In : Journal of Chemical Ecology. 42, 6, p. 463-474 12 p.

Research output: Contribution to journalArticle

21 Scopus citations

Hidden host plant associations of soilborne fungal pathogens: An ecological perspective

Malcolm, G. M., Kuldau, G. A., Gugino, B. K. & Jiménez-Gasco, M. D. M., Jun 1 2013, In : PHYTOPATHOLOGY. 103, 6, p. 538-544 7 p.

Research output: Contribution to journalArticle

71 Scopus citations
22 Scopus citations

Holdover inoculum of Pseudomonas syringae pv. alisalensis from broccoli raab causes disease in subsequent plantings

Cintas, N. A., Koike, S. T., Bunch, R. A. & Bull, C. T., Aug 1 2006, In : Plant disease. 90, 8, p. 1077-1084 8 p.

Research output: Contribution to journalArticle

7 Scopus citations

Host genotype and hypersensitive reaction influence population levels of Xanthomonas campestris pv. vitians in lettuce

Bull, C. T., Gebben, S. J., Goldman, P. H., Trent, M. & Hayes, R. J., Mar 1 2015, In : PHYTOPATHOLOGY. 105, 3, p. 316-324 9 p.

Research output: Contribution to journalArticle

8 Scopus citations

Host plant species determines symbiotic bacterial community mediating suppression of plant defenses

Chung, S. H., Scully, E. D., Peiffer, M., Geib, S. M., Rosa, C., Hoover, K. & Felton, G. W., Jan 3 2017, In : Scientific reports. 7, 39690.

Research output: Contribution to journalArticle

29 Scopus citations

Host range, symptom expression and RNA 3 sequence analyses of six Australian strains of Cucumber mosaic virus

Sulistyowati, E., Mitter, N., Bastiaan-Net, S., Roossinck, M. J. & Dietzgen, R. G., Dec 1 2004, In : Australasian Plant Pathology. 33, 4, p. 505-512 8 p.

Research output: Contribution to journalArticle

15 Scopus citations

Host-specific accumulation and temperature effects on the generation of dimeric viral RNA species derived from the S-RNA of members of the Tospovirus genus

Bertran, A., Ciuffo, M., Margaria, P., Rosa, C., Resende, R. O. & Turina, M., Nov 2016, In : Journal of General Virology. 97, 11, p. 3051-3062 12 p., 000598.

Research output: Contribution to journalArticle

3 Scopus citations

ICTV virus taxonomy profile: Partitiviridae

ICTV Report Consortium, Jan 2018, In : Journal of General Virology. 99, 1, p. 17-18 2 p., 000985.

Research output: Contribution to journalArticle

26 Scopus citations

ICTV virus taxonomy profile: Ourmiavirus

ICTV Report Consortium, Feb 2017, In : Journal of General Virology. 98, 2, p. 129-130 2 p., 000725.

Research output: Contribution to journalArticle

14 Scopus citations

Identification and characterization of peanut stunt cucumovirus from naturally infected alfalfa in Iran

Bananej, K., Hajimorad, M. R., Roossinck, M. J. & Shahraeen, N., Jan 1 1998, In : Plant Pathology. 47, 3, p. 355-361 7 p.

Research output: Contribution to journalArticle

6 Scopus citations

Identification and characterization of Pythium species associated with greenhouse floral crops in Pennsylvania

Moorman, G. W., Kang, S., Geiser, D. M. & Kim, S. H., Nov 1 2002, In : Plant disease. 86, 11, p. 1227-1231 5 p.

Research output: Contribution to journalArticle

83 Scopus citations

Identification and detection of phytophthora: Reviewing our progress, identifying our needs

Martin, F. N., Abad, Z. G., Balci, Y. & Ivors, K., Jan 1 2012, In : Plant disease. 96, 8, p. 1080-1103 24 p.

Research output: Contribution to journalArticle

112 Scopus citations

Identification and differentiation of Tilletia indica and T. walkeri using the polymerase chain reaction

Frederick, R. D., Snyder, K. E., Tooley, P. W., Berthier-Schaad, Y., Peterson, G. L., Bonde, M. R., Schaad, N. W. & Knorr, D. A., Jan 1 2000, In : PHYTOPATHOLOGY. 90, 9, p. 951-960 10 p.

Research output: Contribution to journalArticle

56 Scopus citations

Identification of a new soybean rust resistance gene in PI 567102B

Li, S., Smith, J. R., Ray, J. D. & Frederick, R. D., Feb 28 2012, In : Theoretical and Applied Genetics. 125, 1, p. 133-142 10 p.

Research output: Contribution to journalArticle

62 Scopus citations

Identification of a Pathogenicity locus, rpfA, in Erwinia carotovora subsp. carotovora that encodes a two-component sensor-regulator protein

Frederick, R. D., Chiu, J., Bennetzen, J. L. & Handa, A. K., Apr 1997, In : Molecular Plant-Microbe Interactions. 10, 3, p. 407-415 9 p.

Research output: Contribution to journalArticle

44 Scopus citations

Identification of apple miRNAs and their potential role in fire blight resistance

Kaja, E., Szcześniak, M. W., Jensen, P. J., Axtell, M., McNellis, T. W. & Makałowska, I., Nov 23 2015, In : Tree Genetics and Genomes. 11, 1

Research output: Contribution to journalArticle

13 Scopus citations

Identification of Armillaria species isolated from bigtooth aspen based on rDNA RFLP analysis

Frontz, T. M., Davis, D. D., Bunyard, B. A. & Royse, D. J., Jan 1 1998, In : Canadian Journal of Forest Research. 28, 1, p. 141-149 9 p.

Research output: Contribution to journalArticle

8 Scopus citations

Identification of a second Asian soybean rust resistance gene in Hyuuga soybean

Kendrick, M. D., Harris, D. K., Ha, B. K., Hyten, D. L., Cregan, P. B., Frederick, R. D., Boerma, H. R. & Pedley, K. F., May 1 2011, In : PHYTOPATHOLOGY. 101, 5, p. 535-543 9 p.

Research output: Contribution to journalArticle

35 Scopus citations

Identification of bacteria in mushroom compost using ribosomal RNA sequence

Ivors, K. L., Collopy, P. D., Beyer, D. M. & Kang, S., Jan 1 2000, In : Compost Science and Utilization. 8, 3, p. 247-253 7 p.

Research output: Contribution to journalArticle

15 Scopus citations

Identification of defense-related rice genes by suppression subtractive hybridization and differential screening

Xiong, L., Lee, M. W., Qi, M. & Yang, Y., Jan 1 2001, In : Molecular Plant-Microbe Interactions. 14, 5, p. 685-692 8 p.

Research output: Contribution to journalArticle

105 Scopus citations

Identification of nitrogen-incorporating bacteria in petroleum-contaminated arctic soils by using [15N]DNA-based stable isotope probing and pyrosequencing

Bell, T. H., Yergeau, E., Martineau, C., Juck, D., Whyte, L. G. & Greer, C. W., Jun 1 2011, In : Applied and environmental microbiology. 77, 12, p. 4163-4171 9 p.

Research output: Contribution to journalArticle

63 Scopus citations
4 Scopus citations

Identification of pathogenicity-related genes in the vascular wilt fungus Verticillium dahliae by Agrobacterium tumefaciens-mediated T-DNA insertional mutagenesis

Maruthachalam, K., Klosterman, S. J., Kang, S., Hayes, R. J. & Subbarao, K. V., Nov 1 2011, In : Molecular Biotechnology. 49, 3, p. 209-221 13 p.

Research output: Contribution to journalArticle

49 Scopus citations