Plant Pathology and Environmental Microbiology

  • United States

Research Output 1974 2019

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Article
2014
4 Citations (Scopus)

First report of bacterial leaf blight on mustard greens (Brassica juncea) caused by Pseudomonas cannabina pv. alisalensis in Mississippi

Wechter, W. P., Keinath, A. P., Smith, J. P., Farnham, M. W., Bull, C. T. & Schofield, D. A., Jan 1 2014, In : Plant disease. 98, 8, 1 p.

Research output: Contribution to journalArticle

mustard greens
leaf blight
Brassica juncea
Pseudomonas
agar
3 Citations (Scopus)

First report of penicillium crustosum causing blue mold on stored apple fruit in Serbia

Vico, I., Gaskins, V., Duduk, N., Vasić, M., Yu, J. J., Peter, K. A. & Jurick, W. M., Jan 1 2014, In : Plant disease. 98, 10, 1 p.

Research output: Contribution to journalArticle

Penicillium crustosum
Serbia
apples
fruits
4 Citations (Scopus)
Lepyronia quadrangularis
Cercopidae
Ulmus
Phytoplasma
Cicadellidae
4 Citations (Scopus)

Fungicide management does not affect the rate of genetic gain in soybean

Weidenbenner, N. H., Rowntree, S. C., Wilson, E. W., Suhre, J. J., Conley, S. P., Casteel, S. N., Davis, V. M., Diers, B. W., Esker, P. D., Specht, J. E. & Naeve, S. L., Nov 1 2014, In : Agronomy Journal. 106, 6, p. 2043-2054 12 p.

Research output: Contribution to journalArticle

genetic improvement
fungicides
maturity groups
soybeans
cultivars
21 Citations (Scopus)

Genetic gain × management interactions in soybean: II. nitrogen utilization

Wilson, E. W., Rowntree, S. C., Suhre, J. J., Weidenbenner, N. H., Conley, S. P., Davis, V. M., Diers, B. W., Esker, P. D., Naeve, S. L., Specht, J. E. & Casteel, S. N., Jan 1 2014, In : Crop Science. 54, 1, p. 340-348 9 p.

Research output: Contribution to journalArticle

maturity groups
genetic improvement
soybeans
grain yield
nitrogen
25 Citations (Scopus)

Gut microbes contribute to nitrogen provisioning in a wood-feeding cerambycid

Ayayee, P., Rosa, C., Ferry, J. G., Felton, G., Saunders, M. C. & Hoover, K., Jan 1 2014, In : Environmental Entomology. 43, 4, p. 903-912 10 p.

Research output: Contribution to journalArticle

Nitrogen
digestive system
microorganisms
Larva
nitrogen
5 Citations (Scopus)

Induction of salicylic acid-mediated defense response in perennial ryegrass against infection by Magnaporthe oryzae

Rahman, A., Kuldau, G. A. & Uddin, W., Jan 1 2014, In : PHYTOPATHOLOGY. 104, 6, p. 614-623 10 p.

Research output: Contribution to journalArticle

Magnaporthe oryzae
Lolium perenne
salicylic acid
pathogenesis
infection
9 Citations (Scopus)

Integrated Biological and Cultural Practices Can Reduce Crop Rotation Period of Organic Strawberries

Muramoto, J., Gliessman, S. R., Koike, S. T., Shennan, C., Bull, C. T., Klonsky, K. & Swezey, S., May 2014, Agroecology and Sustainable Food Systems, 38, 5, p. 603-631 29 p.

Research output: Contribution to specialist publicationArticle

crop rotation
plant cultural practices
strawberries
Crops
cultivar
15 Citations (Scopus)

Interpreting three-dimensional spore concentration measurements and escape fraction in a crop canopy using a coupled Eulerian-Lagrangian stochastic model

Gleicher, S. C., Chamecki, M., Isard, S. A., Pan, Y. & Katul, G. G., Aug 15 2014, In : Agricultural and Forest Meteorology. 194, p. 118-131 14 p.

Research output: Contribution to journalArticle

spore
spores
canopy
crop
plant diseases and disorders
4 Citations (Scopus)

Involvement of rppH in thermoregulation in Pseudomonas syringae

Hockett, K. L., Ionescu, M. & Lindow, S. E., 2014, In : Journal of bacteriology. 196, 12, p. 2313-2322 10 p.

Research output: Contribution to journalArticle

Pseudomonas syringae
Body Temperature Regulation
Temperature
Transcriptome
Acyl-CoA Dehydrogenase
32 Citations (Scopus)

Large-eddy simulation of turbulence and particle dispersion inside the canopy roughness sublayer

Pan, Y., Chamecki, M. & Isard, S. A., Jul 22 2014, In : Journal of Fluid Mechanics. 753, 4, p. 499-534 36 p.

Research output: Contribution to journalArticle

canopies
Large eddy simulation
large eddy simulation
Turbulence
roughness
90 Citations (Scopus)

Linkage between bacterial and fungal rhizosphere communities in hydrocarbon-contaminated soils is related to plant phylogeny

Bell, T., El-Din Hassan, S., Lauron-Moreau, A., Al-Otaibi, F., Hijri, M., Yergeau, E. & St-Arnaud, M., Feb 26 2014, In : ISME Journal. 8, 2, p. 331-343 13 p.

Research output: Contribution to journalArticle

Rhizosphere
Phylogeny
Hydrocarbons
Salix
polluted soils
11 Citations (Scopus)

Mapping in an apple (Malus x domestica) F1 segregating population based on physical clustering of differentially expressed genes

Jensen, P. J., Fazio, G., Altman, N., Praul, C. & McNellis, T. W., Apr 4 2014, In : BMC genomics. 15, 1, 261.

Research output: Contribution to journalArticle

Malus
Cluster Analysis
Aphids
Population
Genes
7 Citations (Scopus)

Mercury accumulation in Pinus nigra (Austrian Pine)

Hutnik, R. J., McClenahen, J. R., Long, R. P. & Davis, D. D., Dec 1 2014, In : Northeastern Naturalist. 21, 4, p. 529-540 12 p.

Research output: Contribution to journalArticle

Pinus nigra subsp. nigra
Pinus nigra
mercury
coniferous tree
conifers
2 Citations (Scopus)
Veterinary Schools
Disasters
Emergencies
United States Department of Agriculture
Mandrillus
1 Citation (Scopus)

Molecular characterization of a novel putative partitivirus infecting Cytospora sacchari, a plant pathogenic fungus

Peyambari, M., Habibi, M. K., Fotouhifar, K. B., Dizadji, A. & Roossinck, M. J., 2014, In : Plant Pathology Journal. 30, 2, p. 151-158 8 p.

Research output: Contribution to journalArticle

Partitivirus
Cytospora
Partitiviridae
plant pathogenic fungi
RNA-directed RNA polymerase
8 Citations (Scopus)

Molecular detection of Peronospora variabilis in quinoa seed and phylogeny of the quinoa downy mildew pathogen in South America and the United States

Testen, A. L., Jimenez Gasco, M. D. M., Ochoa, J. B. & Backman, P. A., Jan 1 2014, In : PHYTOPATHOLOGY. 104, 4, p. 379-386 8 p.

Research output: Contribution to journalArticle

Peronospora
downy mildew
pathogens
phylogeny
seeds
7 Citations (Scopus)
Erwinia amylovora
Pyrus
Malus
virulence
pears
5 Citations (Scopus)

Novel primers and PCR protocols for the specific detection and quantification of Sphingobium suberifaciens in situ

Bull, C. T., Goldman, P. H. & Martin, K. J., Oct 1 2014, In : Molecular and Cellular Probes. 28, 5-6, p. 211-217 7 p.

Research output: Contribution to journalArticle

Soil
Lettuce
Polymerase Chain Reaction
Ribosomal DNA
Sphingomonadaceae
26 Citations (Scopus)

Nuclear-cytoplasmic partitioning of cucumber mosaic virus protein 2b determines the balance between its roles as a virulence determinant and an rna-silencing suppressor

Du, Z., Chen, A., Chen, W., Liao, Q., Zhang, H., Bao, Y., Roossinck, M. J. & Carr, J. P., 2014, In : Journal of virology. 88, 10, p. 5228-5241 14 p.

Research output: Contribution to journalArticle

Cucumovirus
Cucumber mosaic virus
Nuclear Localization Signals
RNA Interference
nuclear localization signals
21 Citations (Scopus)

Physiological and phenological responses of historical soybean cultivar releases to earlier planting

Rowntree, S. C., Suhre, J. J., Weidenbenner, N. H., Wilson, E. W., Davis, V. M., Naeve, S. L., Casteel, S. N., Diers, B. W., Esker, P. D. & Conley, S. P., Mar 1 2014, In : Crop Science. 54, 2, p. 804-816 13 p.

Research output: Contribution to journalArticle

planting
soybeans
harvest index
planting date
duration
26 Citations (Scopus)

Phytophthora niederhauserii sp. nov., a polyphagous species associated with ornamentals, fruit trees and native plants in 13 countries

Gloria Abad, Z., Abad, J. A., Cacciola, S. O., Pane, A., Faedda, R., Moralejo, E., Pérez-Sierra, A., Abad-Campos, P., Alvarez-Bernaola, L. A., Bakonyi, J., Józsa, A., Herrero, M. L., Burgess, T. I., Cunnington, J. H., Smith, I. W., Balci, Y., Blomquist, C., Henricot, B., Denton, G., Spies, C. & 7 others, Mcleod, A., Belbahri, L., Cooke, D., Kageyama, K., Uematsu, S., Kurbetli, I. & Kemal Deǧirmenci, D., 2014, In : Mycologia. 106, 3, p. 431-447 17 p.

Research output: Contribution to journalArticle

Phytophthora
Hedera
Cistus
fruit trees
ornamental plants
3 Citations (Scopus)

Plant Pathology 2.0

Kang, S., May 2014, In : Molecular plant pathology. 15, 4, p. 315-318 4 p.

Research output: Contribution to journalArticle

Plant Pathology
plant pathology
pathology
34 Citations (Scopus)

Plant virus metagenomics: What we know and why we need to know more

Stobbe, A. H. & Roossinck, M. J., Apr 16 2014, In : Frontiers in Plant Science. 5, APR, 150.

Research output: Contribution to journalArticle

plant viruses
bioinformatics
1 Citation (Scopus)

Pseudomonas blight caused by Pseudomonas syringae on raspberry in California

Koike, S. T., Bolda, M. P. & Bull, C. T., 2014, In : Plant Disease. 98, 8, p. 1151 1 p.

Research output: Contribution to journalArticle

Pseudomonas syringae
raspberries
blight
Pseudomonas
lesions (plant)
12 Citations (Scopus)

Pseudomonas syringae CC1557: A highly virulent strain with an unusually small type iii effector repertoire that includes a novel effector

Hockett, K., Nishimura, M. T., Karlsrud, E., Dougherty, K. & Baltrus, D. A., Jan 1 2014, In : Molecular Plant-Microbe Interactions. 27, 9, p. 923-932 10 p.

Research output: Contribution to journalArticle

Pseudomonas syringae
Virulence
toxins
Synteny
Proteins
45 Citations (Scopus)

Recombination between clonal lineages of the asexual fungus Verticillium dahliae detected by genotyping by sequencing

Milgroom, M. G., Jiménez-Gasco, M. D. M., Olivares-García, C., Drott, M. T. & Jiménez-D́iaz, R. M., Jan 1 2014, In : PloS one. 9, 9, e106740.

Research output: Contribution to journalArticle

Verticillium
Verticillium dahliae
Fungi
Genetic Recombination
genotyping
7 Citations (Scopus)

Registration of eight soybean germplasm lines resistant to soybean rust

Diers, B. W., Kim, K. S., Frederick, R. D., Hartman, G. L., Unfried, J., Schultz, S. & Cary, T., Jan 1 2014, In : Journal of Plant Registrations. 8, 1, p. 96-101 6 p.

Research output: Contribution to journalArticle

soybean rust
maturity groups
Soybeans
germplasm
soybeans
12 Citations (Scopus)

Response of accessions within tomato wild species, Solanum pimpinellifolium to late blight

Foolad, M. R., Sullenberger, M. T., Ohlson, E. W. & Gugino, B. K., Jan 1 2014, In : Plant Breeding. 133, 3, p. 401-411 11 p.

Research output: Contribution to journalArticle

Solanum pimpinellifolium
Solanum
Phytophthora infestans
Lycopersicon esculentum
tomatoes
11 Citations (Scopus)

Roles of forkhead-box transcription factors in controlling development, pathogenicity, and stress response in Magnaporthe oryzae

Park, J., Kong, S., Kim, S., Kang, S. & Lee, Y. H., 2014, In : Plant Pathology Journal. 30, 2, p. 136-150 15 p.

Research output: Contribution to journalArticle

Magnaporthe oryzae
stress response
pathogenicity
transcription factors
cell cycle
28 Citations (Scopus)

Soybean yield partitioning changes revealed by genetic gain and seeding rate interactions

Suhre, J. J., Weidenbenner, N. H., Rowntree, S. C., Wilson, E. W., Naeve, S. L., Conley, S. P., Casteel, S. N., Diers, B. W., Esker, P. D., Specht, J. E. & Davis, V. M., Sep 1 2014, In : Agronomy Journal. 106, 5, p. 1631-1642 12 p.

Research output: Contribution to journalArticle

genetic improvement
sowing
soybeans
cultivars
seeds
12 Citations (Scopus)
Fusarium oxysporum f. sp. ciceris
vascular wilt
pathogens
microsatellite repeats
translation (genetics)
4 Citations (Scopus)

Successful Agrobacterium mediated transformation of Thielaviopsis basicola by optimizing multiple conditions

Tzima, A. K., Paplomatas, E. J., Schoina, C., Domazakis, E., Kang, S. & Goodwin, P. H., Aug 2014, In : Fungal Biology. 118, 8, p. 675-682 8 p.

Research output: Contribution to journalArticle

Thielaviopsis basicola
Agrobacterium tumefaciens
Agrobacterium
chlamydospores
Fluorescence
9 Citations (Scopus)

The inheritance of resistance to bacterial leaf spot of lettuce caused by Xanthomonas campestris pv. Vitians in three lettuce cultivars

Hayes, R. J., Trent, M. A., Truco, M. J., Antonise, R., Michelmore, R. W. & Bull, C. T., Jan 1 2014, In : Horticulture Research. 1, 14066.

Research output: Contribution to journalArticle

Xanthomonas campestris pv. vitians
leaf spot
Xanthomonas campestris
Lettuce
lettuce
7 Citations (Scopus)

The use of reflectance data for in-season soybean yield prediction

Mourtzinis, S., Rowntree, S. C., Suhre, J. J., Weidenbenner, N. H., Wilson, E. W., Davis, V. M., Naeve, S. L., Casteel, S. N., Diers, B. W., Esker, P. D., Specht, J. E. & Conley, S. P., Jan 1 2014, In : Agronomy Journal. 106, 4, p. 1159-1168 10 p.

Research output: Contribution to journalArticle

reflectance
maturity groups
soybeans
prediction
planting date
4 Citations (Scopus)
Solanum tuberosum subsp. andigenum
Phytophthora infestans
diploidy
clones
genetic variance
20 Citations (Scopus)

Yeasts associated with plums and their potential for controlling brown rot after harvest

Janisiewicz, W. J., Jurick, W. M., Peter, K. A., Kurtzman, C. P. & Buyer, J. S., Jan 1 2014, In : Yeast. 31, 6, p. 207-218 12 p.

Research output: Contribution to journalArticle

Fruits
Yeast
Fruit
Yeasts
Biocontrol
2013
6 Citations (Scopus)

Aflatoxin, fumonisin and Shiga toxin-producing Escherichia coli infections in calves and the effectiveness of celmanax®/dairyman's choice™ applications to eliminate morbidity and mortality losses

Baines, D., Sumarah, M., Kuldau, G., Juba, J., Mazza, A. & Masson, L., Oct 2013, In : Toxins. 5, 10, p. 1872-1895 24 p.

Research output: Contribution to journalArticle

Shiga Toxin
Fumonisins
Shiga-Toxigenic Escherichia coli
Escherichia coli Infections
Aflatoxins
23 Citations (Scopus)

Agrobacterium tumefaciens-mediated transformation of the lichen fungus, Umbilicaria muehlenbergii

Park, S. Y., Jeong, M. H., Wang, H. Y., Kim, J. A., Yu, N. H., Kim, S., Cheong, Y. H., Kang, S., Lee, Y. H. & Hur, J. S., Dec 30 2013, In : PloS one. 8, 12, e83896.

Research output: Contribution to journalArticle

Umbilicaria
Lichens
Agrobacterium tumefaciens
Fungi
Agrobacterium radiobacter
32 Citations (Scopus)

Alteration of microbial community structure affects diesel biodegradation in an Arctic soil

Bell, T. H., Yergeau, E., Juck, D. F., Whyte, L. G. & Greer, C. W., Jul 1 2013, In : FEMS microbiology ecology. 85, 1, p. 51-61 11 p.

Research output: Contribution to journalArticle

Hydrocarbons
diesel
microbial community
biodegradation
community structure
10 Citations (Scopus)
food residuals composts
Agaricus subrufescens
Agaricus
Agaricus bisporus
Agaricales
71 Citations (Scopus)

An inordinate fondness for Fusarium: Phylogenetic diversity of fusaria cultivated by ambrosia beetles in the genus Euwallacea on avocado and other plant hosts

Kasson, M. T., O'Donnell, K., Rooney, A. P., Sink, S., Ploetz, R. C., Ploetz, J. N., Konkol, J. L., Carrillo, D., Freeman, S., Mendel, Z., Smith, J. A., Black, A. W., Hulcr, J., Bateman, C., Stefkova, K., Campbell, P. R., Geering, A. D. W., Dann, E. K., Eskalen, A., Mohotti, K. & 5 others, Short, D. P. G., Aoki, T., Fenstermacher, K. A., Davis, D. D. & Geiser, D. M., Jul 1 2013, In : Fungal Genetics and Biology. 56, p. 147-157 11 p.

Research output: Contribution to journalArticle

Persea
Ambrosia
Beetles
Fusarium
Symbiosis
30 Citations (Scopus)

Biosecurity Implications of New Technology and Discovery in Plant Virus Research

MacDiarmid, R., Rodoni, B., Melcher, U., Ochoa-Corona, F. & Roossinck, M., Aug 1 2013, In : PLoS pathogens. 9, 8, e1003337.

Research output: Contribution to journalArticle

Plant Viruses
Viruses
Technology
Research
Biodiversity
30 Citations (Scopus)

CFGP 2.0: A versatile web-based platform for supporting comparative and evolutionary genomics of fungi and Oomycetes

Choi, J., Cheong, K., Jung, K., Jeon, J., Lee, G. W., Kang, S., Kim, S., Lee, Y. W. & Lee, Y. H., Jan 1 2013, In : Nucleic acids research. 41, D1, p. D714-D719

Research output: Contribution to journalArticle

Oomycetes
Genomics
Fungi
Genome
Information Dissemination
15 Citations (Scopus)

Colorado potato beetle manipulates plant defenses in local and systemic leaves

Chung, S. H., Rosa, C., Hoover, K., Luthe, D. S. & Felton, G. W., Jan 1 2013, In : Plant Signaling and Behavior. 8, 12, e27592.

Research output: Contribution to journalArticle

Leptinotarsa decemlineata
herbivores
bacteria
leaves
host plants
22 Citations (Scopus)

Comparative Genomics of Multiple Strains of Pseudomonas cannabina pv. alisalensis, a Potential Model Pathogen of Both Monocots and Dicots

Sarris, P. F., Trantas, E. A., Baltrus, D. A., Bull, C. T., Wechter, W. P., Yan, S., Ververidis, F., Almeida, N. F., Jones, C. D., Dangl, J. L., Panopoulos, N. J., Vinatzer, B. A. & Goumas, D. E., Mar 28 2013, In : PloS one. 8, 3, e59366.

Research output: Contribution to journalArticle

Pathogens
Genomics
Pseudomonas
Magnoliopsida
Liliopsida
12 Citations (Scopus)

Culturable bacteria from plum fruit surfaces and their potential for controlling brown rot after harvest

Janisiewicz, W. J., Jurick, W. M., Vico, I., Peter, K. A. & Buyer, J. S., Feb 1 2013, In : Postharvest Biology and Technology. 76, p. 145-151 7 p.

Research output: Contribution to journalArticle

plums
Fruit
antagonists
Bacteria
Curtobacterium
24 Citations (Scopus)

Discriminatory simplex and multiplex PCR for four species of the genus Sclerotinia

Abd-Elmagid, A., Garrido, P. A., Hunger, R., Lyles, J. L., Mansfield, M. A., Gugino, B. K., Smith, D. L., Melouk, H. A. & Garzon, C. D., Mar 1 2013, In : Journal of Microbiological Methods. 92, 3, p. 293-300 8 p.

Research output: Contribution to journalArticle

Ascomycota
Multiplex Polymerase Chain Reaction
Genes
DNA
Plant DNA
13 Citations (Scopus)

Dispersion of Heavy Particles Emitted from Area Sources in the Unstable Atmospheric Boundary Layer

Pan, Y., Chamecki, M. & Isard, S. A., Jan 1 2013, In : Boundary-Layer Meteorology. 146, 2, p. 235-256 22 p.

Research output: Contribution to journalArticle

boundary layer
plume
power law
settling velocity
large eddy simulation
16 Citations (Scopus)

Diversity of proteobacterial endosymbionts in hemlock woolly adelgid (Adelges tsugae) (Hemiptera: Adelgidae) from its native and introduced range

von Dohlen, C. D., Spaulding, U., Shields, K., Havill, N. P., Rosa, C. & Hoover, K., Jul 1 2013, In : Environmental microbiology. 15, 7, p. 2043-2062 20 p.

Research output: Contribution to journalArticle

Tsuga
Hemlock
Adelgidae
Adelges tsugae
Hemiptera