Plant Pathology and Environmental Microbiology

  • United States

Research Output 1974 2019

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Article
2008
8 Citations (Scopus)

An on-farm bioassay for assessing Meloidogyne hapla infestations as a decision management tool

Gugino, B. K., Ludwig, J. W. & Abawi, G. S., Mar 1 2008, In : Crop Protection. 27, 3-5, p. 785-791 7 p.

Research output: Contribution to journalArticle

Meloidogyne hapla
bioassays
galls
farms
root systems
22 Citations (Scopus)

Application of silicon sources increases silicon accumulation in perennial ryegrass turf on two soil types

Nanayakkara, U. N., Uddin, W. & Datnoff, L. E., Feb 1 2008, In : Plant and Soil. 303, 1-2, p. 83-94 12 p.

Research output: Contribution to journalArticle

lawns and turf
silicon
Lolium perenne
soil type
soil types
3 Citations (Scopus)
Bromovirus
Cucumovirus
Coinfection
Reverse Transcription
Polymerase Chain Reaction
81 Citations (Scopus)

Aspergillus mycoviruses are targets and suppressors of RNA silencing

Hammond, T. M., Andrewski, M. D., Roossinck, M. J. & Keller, N. P., Feb 1 2008, In : Eukaryotic Cell. 7, 2, p. 350-357 8 p.

Research output: Contribution to journalArticle

Aspergillus
RNA Interference
Viruses
RNA Viruses
Fungal RNA
67 Citations (Scopus)

CFGP: A web-based, comparative fungal genomics platform

Park, J., Park, B., Jung, K., Jang, S., Yu, K., Choi, J., Kong, S., Park, J., Kim, S., Kim, H., Kim, S., Kim, J. F., Blair, J. E., Lee, K., Kang, S. & Lee, Y. H., Jan 1 2008, In : Nucleic acids research. 36, SUPPL. 1, p. D562-D571

Research output: Contribution to journalArticle

Genomics
Genome
Informatics
Computational Biology
Saccharomyces cerevisiae
156 Citations (Scopus)

Clavicipitaceous endophytes: Their ability to enhance resistance of grasses to multiple stresses

Kuldau, G. A. & Bacon, C., Jul 1 2008, In : Biological Control. 46, 1, p. 57-71 15 p.

Research output: Contribution to journalArticle

endophytes
grasses
fungi
biotic stress
abiotic stress
15 Citations (Scopus)

Comparative susceptibilities of legume species to infection by Phakopsora pachyrhizi

Bonde, M. R., Nester, S. E., Berner, D. K., Frederick, R. D., Moore, W. F. & Little, S., Jan 1 2008, In : Plant disease. 92, 1, p. 30-36 7 p.

Research output: Contribution to journalArticle

Phakopsora pachyrhizi
lesions (plant)
legumes
Pueraria montana var. lobata
infection
58 Citations (Scopus)

Comprehensive assessment of soil quality for landscape and urban management

Schindelbeck, R. R., van Es, H. M., Abawi, G. S., Wolfe, D. W., Whitlow, T. L., Gugino, B. K., Idowu, O. J. & Moebius-Clune, B. N., Dec 1 2008, In : Landscape and Urban Planning. 88, 2-4, p. 73-80 8 p.

Research output: Contribution to journalArticle

soil quality
soil
cost
landscape planning
urban management
51 Citations (Scopus)

Contamination of fresh and ensiled maize by multiple Penicillium mycotoxins

Mansfield, M. A., Jones, A. D. & Kuldau, G. A., Mar 1 2008, In : PHYTOPATHOLOGY. 98, 3, p. 330-336 7 p.

Research output: Contribution to journalArticle

Penicillium
mycotoxins
toxins
corn
patulin
13 Citations (Scopus)

Demystifying the nomenclature of bacterial plant pathogens

Bull, C. T., de Boer, S. H., Denny, P., Firrao, G., Fischer-Le saux, M., Saddler, G. S., Scortichini, M., Stead, D. E. & Takikawa, Y., Nov 1 2008, In : Journal of Plant Pathology. 90, 3, p. 403-417 15 p.

Research output: Contribution to journalArticle

plant pathogenic bacteria
plant pathogens
bacteria
taxonomy
plant pathology
10 Citations (Scopus)

Development of simple sequence repeat markers for the soybean rust fungus, Phakopsora pachyrhizi

Anderson, S. J., Stone, C. L., Posada-Buitrago, M. L., Boore, J. L., Neelam, B. A., Stephens, R. M., Luster, D. G., Frederick, R. D. & Pedley, K. F., Nov 1 2008, In : Molecular Ecology Resources. 8, 6, p. 1310-1312 3 p.

Research output: Contribution to journalArticle

Phakopsora pachyrhizi
soybean rust
rust disease
Soybeans
Microsatellite Repeats
171 Citations (Scopus)

Effect of MgAl-layered double hydroxide exchanged with linear alkyl carboxylates on fire-retardancy of PMMA and PS

Nyambo, C., Songtipya, P., Manias, E., Jimenez-Gasco, M. M. & Wilkie, C. A., Oct 14 2008, In : Journal of Materials Chemistry. 18, 40, p. 4827-4838 12 p.

Research output: Contribution to journalArticle

Hydroxides
Polystyrenes
Polymethyl Methacrylate
Polymethyl methacrylates
Fires
24 Citations (Scopus)

Effects of soil type, source of silicon, and rate of silicon source on development of gray leaf spot of perennial ryegrass turf

Nanayakkara, U. N., Uddin, W. & Datnoff, L. E., Jun 1 2008, In : Plant disease. 92, 6, p. 870-877 8 p.

Research output: Contribution to journalArticle

leaf spot
lawns and turf
silicon
Lolium perenne
soil types
5 Citations (Scopus)

Elimination of keratin artifact bands from western blots by using low concentrations of reducing agents

Lee, T. F. & McNellis, T. W., Nov 15 2008, In : Analytical Biochemistry. 382, 2, p. 141-143 3 p.

Research output: Contribution to journalArticle

Mercaptoethanol
Reducing Agents
Keratins
Artifacts
Dithiothreitol
34 Citations (Scopus)

Expression patterns in soybean resistant to Phakopsora pachyrhizi reveal the importance of peroxidases and lipoxygenases

Choi, J. J., Alkharouf, N. W., Schneider, K. T., Matthews, B. F. & Frederick, R. D., Apr 16 2008, In : Functional and Integrative Genomics. 8, 4, p. 341-359 19 p.

Research output: Contribution to journalArticle

Lipoxygenases
Peroxidases
Soybeans
Complementary DNA
Clone Cells
82 Citations (Scopus)

Farmer-oriented assessment of soil quality using field, laboratory, and VNIR spectroscopy methods

Idowu, O. J., Van Es, H. M., Abawi, G. S., Wolfe, D. W., Ball, J. I., Gugino, B. K., Moebius, B. N., Schindelbeck, R. R. & Bilgili, A. V., Jun 1 2008, In : Plant and Soil. 307, 1-2, p. 243-253 11 p.

Research output: Contribution to journalArticle

soil quality
spectroscopy
farmers
soil
methodology
93 Citations (Scopus)

FTFD: An informatics pipeline supporting phylogenomic analysis of fungal transcription factors

Park, J., Park, J., Jang, S., Kim, S., Kong, S., Choi, J., Ahn, K., Kim, J., Lee, S., Kim, S., Park, B., Jung, K., Kim, S., Kang, S. & Lee, Y. H., Apr 1 2008, In : Bioinformatics. 24, 7, p. 1024-1025 2 p.

Research output: Contribution to journalArticle

Informatics
Transcription factors
Transcription Factor
Transcription Factors
Pipelines
80 Citations (Scopus)

Fungal cytochrome P450 database

Park, J., Lee, S., Choi, J., Ahn, K., Park, B., Park, J., Kang, S. & Lee, Y. H., Aug 28 2008, In : BMC genomics. 9, 402.

Research output: Contribution to journalArticle

Cytochrome P-450 Enzyme System
Databases
Fungal Genome
Oomycetes
Proteome
10 Citations (Scopus)

Genetic differentiation of Magnaporthe oryzae populations from scouting plots and commercial rice fields in Korea

Park, S. Y., Milgroom, M. G., Han, S. S., Kang, S. & Lee, Y. H., Apr 1 2008, In : PHYTOPATHOLOGY. 98, 4, p. 436-442 7 p.

Research output: Contribution to journalArticle

Magnaporthe oryzae
paddies
Korean Peninsula
haplotypes
genetic variation
71 Citations (Scopus)

Genome organization and evolution of the AVR-pita avirulence gene family in the Magnaporthe grisea species complex

Chang, H. K., Park, S. Y., Lee, Y. H., Valent, B. & Kang, S., May 1 2008, In : Molecular Plant-Microbe Interactions. 21, 5, p. 658-670 13 p.

Research output: Contribution to journalArticle

Magnaporthe
Magnaporthe grisea
Genome
genome
Magnaporthe oryzae
189 Citations (Scopus)

Lignin degradation in wood-feeding insects

Geib, S. M., Filley, T. R., Hatcher, P. G., Hoover, K., Carlson, J. E., Jimenez-Gasco, M. D. M., Nakagawa-Izumi, A., Sleighter, R. L. & Tien, M., Sep 2 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 35, p. 12932-12937 6 p.

Research output: Contribution to journalArticle

Lignin
Isoptera
Insects
Beetles
Nectria
82 Citations (Scopus)

Long-term effects of harvesting maize stover and tillage on soil quality

Moebius-Clune, B. N., Van Es, H. M., Idowu, O. J., Schindelbeck, R. R., Moebius-Clune, D. J., Wolfe, D. W., Abawi, G. S., Thies, J. E., Gugino, B. K. & Lucey, R., Jul 1 2008, In : Soil Science Society of America Journal. 72, 4, p. 960-969 10 p.

Research output: Contribution to journalArticle

stover
corn stover
soil quality
tillage
long term effects
16 Citations (Scopus)

Meteorological factors and Asian soybean rust epidemics - A systems approach and implications for risk assessment

Del Ponte, E. M. & Esker, P. D., Dec 1 2008, In : Scientia Agricola. 65, SPEC. ISS., p. 88-97 10 p.

Research output: Contribution to journalArticle

soybean rust
meteorological parameters
risk assessment
spore dispersal
spores
42 Citations (Scopus)

Microsclerotia development in Verticillium dahliae: Regulation and differential expression of the hydrophobin gene VDH1

Klimes, A., Amyotte, S. G., Grant, S., Kang, S. & Dobinson, K. F., Dec 1 2008, In : Fungal Genetics and Biology. 45, 12, p. 1525-1532 8 p.

Research output: Contribution to journalArticle

Verticillium
Gene Expression
Crowns
Reporter Genes
Genes
234 Citations (Scopus)

Molecular phylogenetic diversity, multilocus haplotype nomenclature, and in vitro antifungal resistance within the Fusarium solani Species complex

O'Donnell, K., Sutton, D. A., Fothergill, A., McCarthy, D., Rinaldi, M. G., Brandt, M. E., Zhang, N. & Geiser, D. M., Aug 1 2008, In : Journal of clinical microbiology. 46, 8, p. 2477-2490 14 p.

Research output: Contribution to journalArticle

Fusarium
Terminology
Haplotypes
Peptide Elongation Factor 1
Genes
36 Citations (Scopus)

New legume hosts of Phakopsora pachyrhizi based on greenhouse evaluations

Slaminko, T. L., Miles, M. R., Frederick, R. D., Bonde, M. R. & Hartman, G. L., May 1 2008, In : Plant disease. 92, 5, p. 767-771 5 p.

Research output: Contribution to journalArticle

Phakopsora pachyrhizi
legumes
greenhouses
Pueraria montana var. lobata
soybeans
14 Citations (Scopus)

Overwintering of Sclerotium rolfsii and S. rolfsii var. delphinii in different latitudes of the United States

Xu, Z., Gleason, M. L., Mueller, D. S., Esker, P. D., Bradley, C. A., Buck, J. W., Benson, D. M., Dixon, P. M. & Monteiro, J. E. B. A., May 1 2008, In : Plant disease. 92, 5, p. 719-724 6 p.

Research output: Contribution to journalArticle

Athelia rolfsii
overwintering
sclerotia
Southeastern United States
Hosta
15 Citations (Scopus)

Ozone sensitivity of 28 plant selections exposed to ozone under controlled conditions

Kline, L. J., Davis, D. D., Skelly, J. M., Savage, J. E. & Ferdinand, J. A., Apr 18 2008, In : Northeastern Naturalist. 15, 1, p. 57-66 10 p.

Research output: Contribution to journalArticle

ozone
Salix
Monarda didyma
Symphyotrichum novi-belgii
Symphyotrichum novae-angliae
12 Citations (Scopus)

Ozone uptake (flux) as it relates to ozone-induced foliar symptoms of Prunus serotina and Populus maximowizii × trichocarpa

Orendovici-Best, T., Skelly, J. M., Davis, D. D., Ferdinand, J. A., Savage, J. E. & Stevenson, R. E., Jan 1 2008, In : Environmental Pollution. 151, 1, p. 79-92 14 p.

Research output: Contribution to journalArticle

Populus
Ozone
Fluxes
Wounds and Injuries
Vapor Pressure
6 Citations (Scopus)

Patterns of diversity in populations of the turfgrass pathogen Colletotrichum cereale as revealed by transposon fingerprint profiles

Crouch, J. A., Glasheen, B. M., Uddin, W., Clarke, B. B. & Hillman, B. I., May 1 2008, In : Crop Science. 48, 3, p. 1203-1210 8 p.

Research output: Contribution to journalArticle

Colletotrichum
turf grasses
transposons
pathogens
Poa annua
23 Citations (Scopus)

Phytophthora bisheria sp. nov., a new species identified in isolates from the rosaceous raspberry, rose and strawberry in three continents

Abad, Z. G., Abad, J. A., Coffey, M. D., Oudemans, P. V., Man in 't Veld, W. A., De Gruyter, H., Cunnington, J. & Louws, F. J., Jan 1 2008, In : Mycologia. 100, 1, p. 99-110 12 p.

Research output: Contribution to journalArticle

Phytophthora
Fragaria
raspberries
strawberries
Rosa
41 Citations (Scopus)

Phytophthora database: A forensic database supporting the identification and monitoring of phytophthora

Park, J., Park, B., Veeraraghavan, N., Jung, K., Lee, Y. H., Blair, J. E., Geiser, D. M., Isard, S., Mansfield, M. A., Nikolaeva, E., Park, S. Y., Russo, J., Kim, S. H., Greene, M., Ivors, K. L., Balci, Y., Peiman, M., Erwin, D. C., Coffey, M. D., Rossman, A. & 9 others, Farr, D., Cline, E., Grünwald, N. J., Luster, D. G., Schrandt, J., Martin, F., Ribeiro, O. K., Makalowska, I. & Kang, S., Jun 1 2008, In : Plant disease. 92, 6, p. 966-972 7 p.

Research output: Contribution to journalArticle

Phytophthora
monitoring
forensic sciences
risk assessment
gels
24 Citations (Scopus)

Phytophthora quercetorum sp. nov., a novel species isolated from eastern and north-central USA oak forest soils

Balci, Y., Balci, S., Blair, J. E., Park, S. Y., Kang, S. & Macdonald, W. L., Aug 1 2008, In : Mycological Research. 112, 8, p. 906-916 11 p.

Research output: Contribution to journalArticle

Phytophthora
forest soils
forest soil
Quercus
Quercus phellos
7 Citations (Scopus)

Purification and phytotoxicity of apicidins produced by the Fusarium semitectum KCTC16676

Jin, J., Baek, S. R., Lee, K. R., Lee, J., Yun, S. H., Kang, S. & Lee, Y. W., Dec 1 2008, In : Plant Pathology Journal. 24, 4, p. 417-422 6 p.

Research output: Contribution to journalArticle

Fusarium incarnatum
phytotoxicity
Fusarium
Fusarium equiseti
histone deacetylase
16 Citations (Scopus)

SNUGB: A versatile genome browser supporting comparative and functional fungal genomics

Jung, K., Park, J., Choi, J., Park, B., Kim, S., Ahn, K., Choi, J., Choi, D., Kang, S. & Lee, Y. H., Dec 4 2008, In : BMC genomics. 9, 586.

Research output: Contribution to journalArticle

Genomics
Genome
Seoul
Oomycetes
Saccharomyces cerevisiae
14 Citations (Scopus)

The C-terminal half of the HrpN virulence protein of the fire blight pathogen Erwinia amylovora is essential for its secretion and for its virulence and avirulence activities

Sinn, J. P., Oh, C. S., Jensen, P. J., Carpenter, S. C. D., Beer, S. V. & McNellis, T. W., Nov 1 2008, In : Molecular Plant-Microbe Interactions. 21, 11, p. 1387-1397 11 p.

Research output: Contribution to journalArticle

Erwinia amylovora
Virulence
virulence
secretion
pathogens
23 Citations (Scopus)

Using the txtAB operon to quantify pathogenic Streptomyces in potato tubers and soil

Qu, X., Wanner, L. A. & Christ, B. J., Apr 1 2008, In : PHYTOPATHOLOGY. 98, 4, p. 405-412 8 p.

Research output: Contribution to journalArticle

Streptomyces
operon
tubers
potatoes
soil
170 Citations (Scopus)

Virus infection improves drought tolerance

Xu, P., Chen, F., Mannas, J. P., Feldman, T., Sumner, L. W. & Roossinck, M. J., Dec 1 2008, In : New Phytologist. 180, 4, p. 911-921 11 p.

Research output: Contribution to journalArticle

Droughts
Virus Diseases
drought tolerance
plant viruses
viruses
18 Citations (Scopus)

Visual and radiometric assessments for yield losses caused by ray blight in pyrethrum

Pethybridge, S. J., Hay, F., Esker, P., Groom, T., Wilson, C. & Nutter, F. W., Jan 1 2008, In : Crop Science. 48, 1, p. 343-352 10 p.

Research output: Contribution to journalArticle

Tanacetum
blight
pyrethrins
reflectance
radiometers
2007
1328 Citations (Scopus)

A higher-level phylogenetic classification of the Fungi

Hibbett, D. S., Binder, M., Bischoff, J. F., Blackwell, M., Cannon, P. F., Eriksson, O. E., Huhndorf, S., James, T., Kirk, P. M., Lücking, R., Thorsten Lumbsch, H., Lutzoni, F., Matheny, P. B., McLaughlin, D. J., Powell, M. J., Redhead, S., Schoch, C. L., Spatafora, J. W., Stalpers, J. A., Vilgalys, R. & 47 others, Aime, M. C., Aptroot, A., Bauer, R., Begerow, D., Benny, G. L., Castlebury, L. A., Crous, P. W., Dai, Y. C., Gams, W., Geiser, D. M., Griffith, G. W., Gueidan, C., Hawksworth, D. L., Hestmark, G., Hosaka, K., Humber, R. A., Hyde, K. D., Ironside, J. E., Kõljalg, U., Kurtzman, C. P., Larsson, K. H., Lichtwardt, R., Longcore, J., Miadlikowska, J., Miller, A., Moncalvo, J. M., Mozley-Standridge, S., Oberwinkler, F., Parmasto, E., Reeb, V., Rogers, J. D., Roux, C., Ryvarden, L., Sampaio, J. P., Schüßler, A., Sugiyama, J., Thorn, R. G., Tibell, L., Untereiner, W. A., Walker, C., Wang, Z., Weir, A., Weiss, M., White, M. M., Winka, K., Yao, Y. J. & Zhang, N., May 1 2007, In : Mycological Research. 111, 5, p. 509-547 39 p.

Research output: Contribution to journalArticle

Chytridiomycota
Neocallimastigales
Neocallimastigomycota
Dikarya
Fungi
1086 Citations (Scopus)

A metagenomic survey of microbes in honey bee colony collapse disorder

Cox-Foster, D. L., Conlan, S., Holmes, E. C., Palacios, G., Evans, J. D., Moran, N. A., Quan, P. L., Briese, T., Hornig, M., Geiser, D. M., Martinson, V., VanEngelsdorp, D., Kalkstein, A. L., Drysdale, A., Hui, J., Zhai, J., Cui, L., Hutchison, S. K., Simons, J. F., Egholm, M. & 2 others, Pettis, J. S. & Lipkin, W. I., Oct 12 2007, In : Science. 318, 5848, p. 283-287 5 p.

Research output: Contribution to journalArticle

Colony Collapse
Metagenomics
Honey
Bees
Urticaria
4 Citations (Scopus)

An IPM program for managing fungal leaf blight diseases of carrot in New York

Gugino, B. K., Carroll, J. E., Widmer, T. L., Chen, P. & Abawi, G. S., Jan 1 2007, In : Plant disease. 91, 1, p. 59-65 7 p.

Research output: Contribution to journalArticle

leaf blight
integrated pest management
carrots
pesticide application
disease incidence
420 Citations (Scopus)

A virus in a fungus in a plant: Three-way symbiosis required for thermal tolerance

Márquez, L. M., Redman, R. S., Rodriguez, R. J. & Roossinck, M. J., Jan 26 2007, In : Science. 315, 5811, p. 513-515 3 p.

Research output: Contribution to journalArticle

Symbiosis
Fungi
Viruses
Endophytes
Panic
12 Citations (Scopus)

Comparative genetic analysis of Magnaporthe oryzae isolates causing gray leaf spot of perennial ryegrass turf in the United States and Japan

Tosa, Y., Uddin, W., Viji, G., Kang, S. & Mayama, S., May 1 2007, In : Plant disease. 91, 5, p. 517-524 8 p.

Research output: Contribution to journalArticle

leaf spot
Magnaporthe oryzae
lawns and turf
Lolium perenne
genetic techniques and protocols
28 Citations (Scopus)

Detection and quantification of Rhizoctonia solani AG-1 IA, the rice sheath blight pathogen, in rice using real-time PCR

Sayler, R. J. & Yang, Y., Dec 1 2007, In : Plant disease. 91, 12, p. 1663-1668 6 p.

Research output: Contribution to journalArticle

beriberi
Thanatephorus cucumeris
blight
quantitative polymerase chain reaction
rice
20 Citations (Scopus)

Detection of Flavescence dorée phytoplasma in grapevine by reverse-transcription PCR

Margaria, P., Rosa, C., Marzachi, C., Turina, M. & Palmano, S., Nov 1 2007, In : Plant disease. 91, 11, p. 1496-1501 6 p.

Research output: Contribution to journalArticle

Phytoplasma
reverse transcriptase polymerase chain reaction
screening
piedmont
sap
12 Citations (Scopus)

Development of a real-time RT-PCR SYBR green assay for Tomato ring spot virus in grape

Stewart, E. L., Qu, X., Overton, B. E., Gildow, F. E., Wenner, N. G. & Grove, D. S., Sep 1 2007, In : Plant disease. 91, 9, p. 1083-1088 6 p.

Research output: Contribution to journalArticle

grapes
quantitative polymerase chain reaction
reverse transcriptase polymerase chain reaction
tomatoes
viruses
8 Citations (Scopus)

Differential response of common bean cultivars to Phakopsora pachyrhizi

Miles, M. R., Pastor-Corrales, M. A., Hartman, G. L. & Frederick, R. D., Jun 1 2007, In : Plant disease. 91, 6, p. 698-704 7 p.

Research output: Contribution to journalArticle

Phakopsora pachyrhizi
beans
Uromyces appendiculatus
cultivars
lesions (plant)
30 Citations (Scopus)

Effects of temperature on urediniospore germination, germ tube growth, and initiation of infection in soybean by Phakopsora isolates

Bonde, M. R., Berner, D. K., Nester, S. E. & Frederick, R. D., Aug 1 2007, In : PHYTOPATHOLOGY. 97, 8, p. 997-1003 7 p.

Research output: Contribution to journalArticle

Phakopsora
germ tube
Phakopsora pachyrhizi
soybeans
germination
37 Citations (Scopus)

Environment determines fidelity for an RNA virus replicase

Pita, J. S., De Miranda, J. R., Schneider, W. L. & Roossinck, M. J., Sep 1 2007, In : Journal of virology. 81, 17, p. 9072-9077 6 p.

Research output: Contribution to journalArticle

Satellite RNAs
satellite RNA
RNA Replicase
RNA Viruses
Cucumovirus