Research Output 1973 2020

46 Citations (Scopus)

Alternating direction methods for latent variable gaussian graphical model selection

Ma, S., Xue, L. & Zou, H., Aug 7 2013, In : Neural computation. 25, 8, p. 2172-2198 27 p.

Research output: Contribution to journalLetter

Synthetic Genes
Direction compound
Model Selection
Consensus
Gene Expression
3 Citations (Scopus)

Alternatives for measuring endogenous adrenocortical activity in asthmatics treated with inhaled corticosteroids

Buyantseva, L. V., Chinchilli, V., Tulchinsky, M., Bascom, R. & Martin, R. J., Dec 1 2005, In : Endocrine Research. 31, 4, p. 245-258 14 p.

Research output: Contribution to journalArticle

Hydrocortisone
Adrenal Cortex Hormones
Confidence Intervals
42 Citations (Scopus)

A macaque's-eye view of human insertions and deletions: Differences in mechanisms

Kvikstad, E. M., Tyekucheva, S., Chiaromonte, F. & Makova, K. D., Sep 1 2007, In : PLoS computational biology. 3, 9, p. 1772-1782 11 p.

Research output: Contribution to journalArticle

Macaca
Genetic Recombination
Deletion
recombination
Insertion
69 Citations (Scopus)

A majorization-minimization approach to the sparse generalized eigenvalue problem

Sriperumbudur, B. K., Torres, D. A. & Lanckriet, G. R. G., Oct 1 2011, In : Machine Learning. 85, 1-2, p. 3-39 37 p.

Research output: Contribution to journalArticle

Discriminant analysis
Principal component analysis
Students
Statistical Data Interpretation
2 Citations (Scopus)

A mapping framework of competition–cooperation QTLs that drive community dynamics

Jiang, L., He, X., Jin, Y., Ye, M., Sang, M., Chen, N., Zhu, J., Zhang, Z., Li, J. & Wu, R., Dec 1 2018, In : Nature communications. 9, 1, 3010.

Research output: Contribution to journalArticle

Quantitative Trait Loci
loci
Genes
Ecology
ecology
4 Citations (Scopus)

A Markov-switching model for heat waves

Shaby, B. A., Reich, B. J., Cooley, D. & Kaufman, C. G., Mar 2016, In : Annals of Applied Statistics. 10, 1, p. 74-93 20 p.

Research output: Contribution to journalArticle

Markov Switching Model
Heat
Extreme Values
Latent Variables
Extreme Value Distribution
4 Citations (Scopus)

A matched crossover design for clinical trials

Simon, L. J. & Chinchilli, V. M., Sep 1 2007, In : Contemporary Clinical Trials. 28, 5, p. 638-646 9 p.

Research output: Contribution to journalArticle

Cross-Over Studies
Clinical Trials
Therapeutics
Asthma
Smoking
25 Citations (Scopus)

A mathematical framework for functional mapping of complex phenotypes using delay differential equations

Fu, G., Wang, Z., Li, J. & Wu, R., Nov 21 2011, In : Journal of Theoretical Biology. 289, 1, p. 206-216 11 p.

Research output: Contribution to journalArticle

Quantitative Trait Loci
Delay Differential Equations
Phenotype
quantitative trait loci
Differential equations
41 Citations (Scopus)

A matter of life or death: How microsatellites emerge in and vanish from the human genome

Kelkar, Y. D., Eckert, K. A., Chiaromonte, F. & Makova, K. D., Dec 1 2011, In : Genome research. 21, 12, p. 2038-2048 11 p.

Research output: Contribution to journalArticle

Human Genome
Microsatellite Repeats
Parturition
DNA Transposable Elements
Life Cycle Stages

A maximum likelihood approach to functional mapping of longitudinal binary traits

Wang, C., Li, H., Wang, Z., Wang, Y., Wang, N., Wang, Z. & Wu, R., Nov 1 2012, In : Statistical Applications in Genetics and Molecular Biology. 11, 6, 2.

Research output: Contribution to journalArticle

Quantitative Trait Loci
Maximum likelihood
Likelihood Functions
Maximum Likelihood
Statistical Models
3 Citations (Scopus)

A maximum likelihood-based method for mining major genes affecting a quantitative character

Wu, R., Li, B., Wu, S. S. & Casella, G., Jan 1 2001, In : Biometrics. 57, 3, p. 764-768 5 p.

Research output: Contribution to journalArticle

major genes
quantitative traits
Maximum likelihood
Maximum Likelihood
Mining
12 Citations (Scopus)

A measurement of multi-factor orthogonality

Deng, L. Y., Lin, D. K. J. & Wang, J., Jan 1 1996, In : Statistics and Probability Letters. 28, 3, p. 203-209 7 p.

Research output: Contribution to journalArticle

Orthogonality
Supersaturated Design
Design
Multi-factor
1 Citation (Scopus)

A measure of association between two sets of multivariate responses

Lin, H. M. & Chinchilli, V., Nov 26 2001, In : Journal of Biopharmaceutical Statistics. 11, 3, p. 139-154 16 p.

Research output: Contribution to journalArticle

Multivariate Response
Measures of Association
Skin Tests
Allergens
Asthma
34 Citations (Scopus)

A mechanistic model for genetic machinery of ontogenetic growth

Wu, R., Wang, Z., Zhao, W. & Cheverud, J. M., Dec 1 2004, In : Genetics. 168, 4, p. 2383-2394 12 p.

Research output: Contribution to journalArticle

Genetic Models
Growth
Quantitative Trait Loci
Biological Models
Chromosomes, Human, Pair 1
11 Citations (Scopus)

A minimax approach to consistency and efficiency for estimating equations

Li, B., Jan 1 1996, In : Annals of Statistics. 24, 3, p. 1283-1297 15 p.

Research output: Contribution to journalArticle

Estimating Equation
Minimax
Log-likelihood Ratio
Quasi-likelihood
Likelihood Function
34 Citations (Scopus)

A mixed effects model for the analysis of repeated measures cross-over studies

Putt, M. & Chinchilli, V. M., Nov 30 1999, In : Statistics in Medicine. 18, 22, p. 3037-3058 22 p.

Research output: Contribution to journalArticle

Mixed Effects Model
Repeated Measures
Cross-Over Studies
Crossover
Crossover Design
10 Citations (Scopus)

A mixed polyploid model for linkage analysis in outcrossing tetraploids using a pseudo-test backcross design

Wu, R., Ma, C. X. & Casella, G., Sep 28 2004, In : Journal of Computational Biology. 11, 4, p. 562-580 19 p.

Research output: Contribution to journalArticle

Linkage Analysis
Polyploidy
Tetraploidy
Mixed Model
Chromosomes
29 Citations (Scopus)

A mixture of the MANOVA and GMANOVA models

Chinchilli, V. & Elswick, R. K., Jan 1 1985, In : Communications in Statistics - Theory and Methods. 14, 12, p. 3075-3089 15 p.

Research output: Contribution to journalArticle

Multivariate Analysis of Variance
Likelihood Ratio Criterion
Linear Hypothesis
Goodness of Fit Test
Likelihood Ratio Test

A model for computing genes governing marital dissolution through sentimental dynamics

Zhou, L., Shen, Y., Wu, W., Wang, Z., Hou, W., Zhu, S. & Wu, R., Jul 21 2014, In : Journal of Theoretical Biology. 353, p. 24-33 10 p.

Research output: Contribution to journalArticle

Dissolution
Genes
marital relationships
Gene
Computing
8 Citations (Scopus)

A model for estimating joint maternal-offspring effects on seed development in autogamous plants

Zhang, L., Yang, M. C. K., Wang, X., Larkins, B. A., Gallo-Meagher, M. & Wu, R., Jan 1 2005, In : Physiological genomics. 19, p. 262-269 8 p.

Research output: Contribution to journalArticle

Endosperm
Seeds
Joints
Mothers
Quantitative Trait Loci
10 Citations (Scopus)

A model for family-based case-control studies of genetic imprinting and epistasis

Li, X., Sui, Y., Liu, T., Wang, J., Li, Y., Lin, Z., Hegarty, J., Koltun, W. A., Wang, Z. & Wu, R., Aug 2 2013, In : Briefings in bioinformatics. 15, 6, p. 1069-1079 11 p.

Research output: Contribution to journalArticle

Genetic Epistasis
Genomic Imprinting
Case-Control Studies
Genes
Statistical Models
5 Citations (Scopus)

A model for linkage analysis with apomixis

Hou, W., Lin, S., Li, Y., Pang, X., Zeng, Y. & Wu, R., May 31 2011, In : Theoretical And Applied Genetics. 123, 5, p. 681-691 11 p.

Research output: Contribution to journalArticle

Apomixis
apomixis
linkage (genetics)
Seeds
Asexual Reproduction
19 Citations (Scopus)

A model for transgenerational imprinting variation in complex traits

Wang, C., Wang, Z., Luo, J., Li, Q., Li, Y., Ahn, K., Prows, D. R. & Wu, R., Aug 13 2010, In : PloS one. 5, 7, e11396.

Research output: Contribution to journalArticle

Genomic Imprinting
genomic imprinting
Alleles
Quantitative Trait Loci
Genes
12 Citations (Scopus)

A model framework for identifying genes that guide the evolution of heterochrony

Sun, L., Ye, M., Hao, H., Wang, N., Wang, Y., Cheng, T., Zhang, Q. & Wu, R., Aug 2014, In : Molecular biology and evolution. 31, 8, p. 2238-2247 10 p.

Research output: Contribution to journalArticle

quantitative trait loci
gene
Quantitative Trait Loci
Growth
Genes
13 Citations (Scopus)

A model-free approach for detecting interactions in genetic association studies

Li, J., Dan, J., Li, C. & Wu, R., Aug 2 2013, In : Briefings in bioinformatics. 15, 6, p. 1057-1068 12 p., bbt082.

Research output: Contribution to journalArticle

Genetic Association Studies
Nucleotides
Polymorphism
Single Nucleotide Polymorphism
Genetic Models
37 Citations (Scopus)

A multilocus likelihood approach to joint modeling of linkage, parental diplotype and gene order in a full-sib family

Lu, Q., Cui, Y. & Wu, R., Jul 26 2004, In : BMC Genetics. 5, 20.

Research output: Contribution to journalArticle

Gene Order
Joints
Chromosome Mapping
Likelihood Functions
Pedigree
18 Citations (Scopus)
Linkage Disequilibrium
Recombination
Genetic Recombination
Population
Likelihood
58 Citations (Scopus)

A multiplicative-epistatic model for analyzing interspecific differences in outcrossing species

Wu, R. & Li, B., Jun 1 1999, In : Biometrics. 55, 2, p. 355-365 11 p.

Research output: Contribution to journalArticle

Multiplicative Model
outcrossing
Locus
loci
Population Genetics
4 Citations (Scopus)

A multi-Poisson dynamic mixture model to cluster developmental patterns of gene expression by RNA-seq

Ye, M., Wang, Z., Wang, Y. & Wu, R., Mar 1 2015, In : Briefings in bioinformatics. 16, 2, p. 205-215 11 p., bbu013.

Research output: Contribution to journalArticle

Developmental Genes
RNA
Gene expression
Multigene Family
Gene Expression
31 Citations (Scopus)

A multivalent pairing model of linkage analysis in autotetraploids

Wu, S. S., Wu, R., Chang-Xing, M., Zeng, Z. B., Yang, M. C. K. & Casella, G., 2001, In : Genetics. 159, 3, p. 1339-1350 12 p.

Research output: Contribution to journalArticle

Polyploidy
Germ Cells
Chromosome Pairing
Chromosome Mapping
Meiosis
6 Citations (Scopus)

A multivalent three-point linkage analysis model of autotetraploids

Lu, Y., Yang, X., Tong, C., Li, X., Feng, S., Wang, Z., Pang, X., Wang, Y., Wang, N., Tobias, C. M. & Wu, R., Jul 1 2013, In : Briefings in bioinformatics. 14, 4, p. 460-468 9 p., bbs051.

Research output: Contribution to journalArticle

Genes
Panicum
Biological Phenomena
Polyploidy
Gene Order
59 Citations (Scopus)

A multivariate exponentially weighted moving average control chart for monitoring process variability

Yeh, A. B., Lin, D. K. J., Zhou, H. & Venkataramani, C., Jun 1 2003, In : Journal of Applied Statistics. 30, 5, p. 507-536 30 p.

Research output: Contribution to journalArticle

Exponentially Weighted Moving Average Control Chart
Process Monitoring
Chart
Exponentially Weighted Moving Average
Process Mean
5 Citations (Scopus)

A Murine Model to Study Epilepsy and SUDEP Induced by Malaria Infection

Ssentongo, P., Robuccio, A. E., Thuku, G., Sim, D. G., Nabi, A., Bahari, F., Shanmugasundaram, B., Billard, M. W., Geronimo, A., Short, K. W., Drew, P. J., Baccon, J., Weinstein, S. L., Gilliam, F. G., Stoute, J. A., Chinchilli, V. M., Read, A. F., Gluckman, B. J. & Schiff, S. J., Mar 8 2017, In : Scientific reports. 7, 43652.

Research output: Contribution to journalArticle

Sudden Death
Malaria
Epilepsy
Infection
Cerebral Malaria
8 Citations (Scopus)

A mutual semantic endorsement approach to image retrieval and context provision

Li, J., Nov 10 2005, MIR 2005 - Proceedings of the 7th ACM SIGMM International Workshop on Multimedia Information Retrieval, Co-located with ACM Multimedia 2005. Association for Computing Machinery, Inc, p. 173-182 10 p. (MIR 2005 - Proceedings of the 7th ACM SIGMM International Workshop on Multimedia Information Retrieval, Co-located with ACM Multimedia 2005).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Image retrieval
Semantics
Content based retrieval
Experiments
340 Citations (Scopus)

An abundance of small exoplanets around stars with a wide range of metallicities

Buchhave, L. A., Latham, D. W., Johansen, A., Bizzarro, M., Torres, G., Rowe, J. F., Batalha, N. M., Borucki, W. J., Brugamyer, E., Caldwell, C., Bryson, S. T., Ciardi, D. R., Cochran, W. D., Endl, M., Esquerdo, G. A., Ford, E. B., Geary, J. C., Gilliland, R. L., Hansen, T., Isaacson, H. & 9 others, Laird, J. B., Lucas, P. W., Marcy, G. W., Morse, J. A., Robertson, P., Shporer, A., Stefanik, R. P., Still, M. & Quinn, S. N., Jun 21 2012, In : Nature. 486, 7403, p. 375-377 3 p.

Research output: Contribution to journalArticle

Planets
Solar System
Galaxies
United States National Aeronautics and Space Administration
Ice

An adaptive multivariate two-sample test with application to microbiome differential abundance analysis

Banerjee, K., Zhao, N., Srinivasan, A., Xue, L., Hicks, S. D., Middleton, F. A., Wu, R. & Zhan, X., Jan 1 2019, In : Frontiers in Genetics. 10, APR, 350.

Research output: Contribution to journalArticle

Open Access
Microbiota
Validation Studies
Software
Multivariate Analysis
10 Citations (Scopus)

An adaptive-to-model test for partially parametric single-index models

Zhu, X., Guo, X. & Zhu, L., Sep 1 2017, In : Statistics and Computing. 27, 5, p. 1193-1204 12 p.

Research output: Contribution to journalArticle

Single-index Model
Parametric Model
Dimension Reduction
Null
Sampling Distribution

An adjustment in p-values for multiple endpoint testing

Weller, E. A. & Chinchilli, V., Jan 1 1993, In : Drug Information Journal. 27, 3, p. 695-703 9 p.

Research output: Contribution to journalArticle

Testing
Toxicity
Statistics
1 Citation (Scopus)

An AFLP linkage map using a hybrid population of Populus tomentosa

Zhang, Y. Z., Liu, H. X., Wu, R. L., Li, M. L., Hu, J. J., Yin, W. L. & Han, Y. F., Oct 1 2003, In : Forest Research. 16, 5, p. 595-603 9 p.

Research output: Contribution to journalArticle

Populus tomentosa
linkage groups
amplified fragment length polymorphism
chromosome mapping
loci
34 Citations (Scopus)

A naive bayes source classifier for X-ray sources

Broos, P. S., Getman, K. V., Povich, M. S., Townsley, L. K., Feigelson, E. D. & Garmire, G. P., May 1 2011, In : Astrophysical Journal, Supplement Series. 194, 1, 4.

Research output: Contribution to journalArticle

classifiers
x rays
catalogs
contaminants
contamination
5 Citations (Scopus)

An algorithm for automatic inertial sensors calibration

Guerrier, S., Molinari, R., Skaloud, J. & Victoria-Feser, M. P., Jan 1 2013, p. 1092-1097. 6 p.

Research output: Contribution to conferencePaper

Calibration
Sensors
Random processes
candidacy
methodology
9 Citations (Scopus)

An algorithm for efficient estimation of superimposed exponential signals

Bai, Z. D., Rao, C. R. & Chow, M., Dec 1 1989, p. 342-345. 4 p.

Research output: Contribution to conferencePaper

Covariance matrix
Maximum likelihood
4 Citations (Scopus)

An algorithm for molecular dissection of tumor progression

Liu, T., Zhao, W., Tian, L. & Wu, R., Mar 1 2005, In : Journal of Mathematical Biology. 50, 3, p. 336-354 19 p.

Research output: Contribution to journalArticle

Dissection
Quantitative Trait Loci
Progression
Tumors
Tumor
12 Citations (Scopus)

An algorithmic model for constructing a linkage and linkage disequilibrium map in outcrossing plant populations

Li, J., Li, Q., Hou, W., Han, K., Li, Y., Wu, S., Li, Y. & Wu, R., Sep 23 2009, In : Genetics Research. 91, 1, p. 9-21 13 p.

Research output: Contribution to journalArticle

Linkage Disequilibrium
Population
Genetic Structures
Alleles
Genetic Linkage
5 Citations (Scopus)

An allometric model for mapping seed development in plants

Huang, Z., Tong, C., Bo, W., Pang, X., Wang, Z., Xu, J., Gai, J. & Wu, R., Jul 2014, In : Briefings in bioinformatics. 15, 4, p. 562-570 9 p., bbt019.

Research output: Contribution to journalArticle

Plant Development
Quantitative Trait Loci
Seed
Seeds
Growth
7 Citations (Scopus)

An all sky extrasolar planet survey with new generation multiple object doppler instruments at sloan telescope

Ge, J., Van Eyken, J., Mahadevan, S., Wan, X., Zhao, B., Hariharan, A., Guo, P., Dewitt, C., Cohen, R., Warner, C., Fleming, S., Crepp, J., Kane, S., Leger, F., Pan, K., Ford, E., Seager, S., Agol, E., Schneider, D. & Shaklan, S., Jun 1 2007, First Light Science with the GTC. p. 30-36 7 p. (Revista Mexicana de Astronomia y Astrofisica: Serie de Conferencias; vol. 29).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

extrasolar planets
sky
planets
planet
telescopes
6 Citations (Scopus)

An alternative derivation of aligned rank tests for regression

Akritas, M. G., Jan 1 1991, In : Journal of Statistical Planning and Inference. 27, 2, p. 171-186 16 p.

Research output: Contribution to journalArticle

Rank Test
F-statistics
Regression
Statistics
Alternatives
10 Citations (Scopus)

An alternative index for assessing profile similarity in bioequivalence trials

Mauger, D. & Chinchilli, V., Oct 30 2000, In : Statistics in Medicine. 19, 20, p. 2855-2866 12 p.

Research output: Contribution to journalArticle

Bioequivalence
Therapeutic Equivalency
Drug Compounding
Alternatives
Biological Availability
1 Citation (Scopus)

An alternative robust estimator of average treatment effect in causal inference

Liu, J., Ma, Y. & Wang, L., Sep 2018, In : Biometrics. 74, 3, p. 910-923 14 p.

Research output: Contribution to journalArticle

Average Treatment Effect
Causal Inference
Propensity Score
Robust Estimators
Alternatives
27 Citations (Scopus)

Analyses of fish species richness with spatial covariate

Hobert, J. P., Altman, N. S. & Schofield, C. L., Sep 1 1997, In : Journal of the American Statistical Association. 92, 439, p. 846-854 9 p.

Research output: Contribution to journalArticle

Species Richness
Fish
Covariates
Variogram
Regression