Research Output

A two-stage Bayesian model selection strategy for supersaturated designs

Beattie, S. D., Fong, D. K. H. & Lin, D. K. J., Feb 1 2002, Technometrics, 44, 1, p. 55-63 9 p.

Research output: Contribution to specialist publicationArticle

68 Scopus citations

A two-stage model for incidence and prevalence in point-level spatial count data

Recta, V., Haran, M. & Rosenberger, J. L., Mar 1 2012, In : Environmetrics. 23, 2, p. 162-174 13 p.

Research output: Contribution to journalArticle

8 Scopus citations

A two-step computationally efficient procedure for IMU classification and calibration

Bakalli, G., Radi, A., Nassar, S., Guerrier, S., Zhang, Y. & Molinari, R., Jun 5 2018, 2018 IEEE/ION Position, Location and Navigation Symposium, PLANS 2018 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 534-540 7 p. (2018 IEEE/ION Position, Location and Navigation Symposium, PLANS 2018 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Augmenting supersaturated designs with Bayesian D-optimality

Gutman, A. J., White, E. D., Lin, D. K. J. & Hill, R. R., Mar 1 2014, In : Computational Statistics and Data Analysis. 71, p. 1147-1158 12 p.

Research output: Contribution to journalArticle

3 Scopus citations

Augmenting the bootstrap to analyze high dimensional genomic data

Tyekucheva, S. & Chiaromonte, F., May 1 2008, In : Test. 17, 1, p. 1-18 18 p.

Research output: Contribution to journalArticle

6 Scopus citations

A unified approach to rank tests for mixed models

Akritas, M. G. & Brunner, E., Jun 16 1997, In : Journal of Statistical Planning and Inference. 61, 2, p. 249-277 29 p.

Research output: Contribution to journalArticle

94 Scopus citations

A user's guide to the Encyclopedia of DNA elements (ENCODE)

Myers, R. M., Stamatoyannopoulos, J., Snyder, M., Dunham, I., Hardison, R. C., Bernstein, B. E., Gingeras, T. R., Kent, W. J., Birney, E., Wold, B., Crawford, G. E., Epstein, C. B., Shoresh, N., Ernst, J., Mikkelsen, T. S., Kheradpour, P., Zhang, X., Wang, L., Issner, R., Coyne, M. J. & 295 others, Durham, T., Ku, M., Truong, T., Ward, L. D., Altshuler, R. C., Lin, M. F., Kellis, M., Davis, C. A., Kapranov, P., Dobin, A., Zaleski, C., Schlesinger, F., Batut, P., Chakrabortty, S., Jha, S., Lin, W., Drenkow, J., Wang, H., Bell, K., Bell, I., Gao, H., Dumais, E., Dumais, J., Antonarakis, S. E., Ucla, C., Borel, C., Guigo, R., Djebali, S., Lagarde, J., Kingswood, C., Ribeca, P., Sammeth, M., Alioto, T., Merkel, A., Tilgner, H., Carninci, P., Hayashizaki, Y., Lassmann, T., Takahashi, H., Abdelhamid, R. F., Hannon, G., Fejes, K. T., Preall, J., Gordon, A., Sotirova, V., Reymond, A., Howald, C., Graison, E. A. Y., Chrast, J., Ruan, Y., Ruan, X., Shahab, A., Poh, W. T., Wei, C. L., Furey, T. S., Boyle, A. P., Sheffield, N. C., Song, L., Shibata, Y., Vales, T., Winter, D., Zhang, Z., London, D., Wang, T., Keefe, D., Iyer, V. R., Lee, B. K., McDaniell, R. M., Liu, Z., Battenhouse, A., Bhinge, A. A., Lieb, J. D., Grasfeder, L. L., Showers, K. A., Giresi, P. G., Kim, S. K. C., Shestak, C., Pauli, F., Reddy, T. E., Gertz, J., Partridge, E. C., Jain, P., Sprouse, R. O., Bansal, A., Pusey, B., Muratet, M. A., Varley, K. E., Bowling, K. M., Newberry, K. M., Nesmith, A. S., Dilocker, J. A., Parker, S. L., Waite, L. L., Thibeault, K., Roberts, K., Absher, D. M., Mortazavi, A., Williams, B., Marinov, G., Trout, D., King, B., McCue, K., Kirilusha, A., DeSalvo, G., Fisher, K. A., Amrhein, H., Pepke, S., Vielmetter, J., Sherlock, G., Sidow, A., Batzoglou, S., Rauch, R., Kundaje, A., Libbrecht, M., Margulies, E. H., Parker, S. C. J., Elnitski, L., Green, E. D., Hubbard, T., Harrow, J., Searle, S., Kokocinski, F., Aken, B., Frankish, A., Hunt, T., Despacio-Reyes, G., Kay, M., Mukherjee, G., Bignell, A., Saunders, G., Boychenko, V., Brent, M., van Baren, M. J., Brown, R. H., Gerstein, M., Khurana, E., Balasubramanian, S., Lam, H., Cayting, P., Robilotto, R., Lu, Z., Derrien, T., Tanzer, A., Knowles, D. G., Mariotti, M., Haussler, D., Harte, R., Diekhans, M., Lin, M., Valencia, A., Tress, M., Landt, S. G., Raha, D., Shi, M., Euskirchen, G., Grubert, F., Kasowski, M., Lian, J., Lacroute, P., Xu, Y., Monahan, H., Patacsil, D., Slifer, T., Yang, X., Charos, A., Reed, B., Wu, L., Auerbach, R. K., Habegger, L., Hariharan, M., Rozowsky, J., Abyzov, A., Weissman, S. M., Struhl, K., Lamarre-Vincent, N., Lindahl-Allen, M., Miotto, B., Moqtaderi, Z., Fleming, J. D., Newburger, P., Farnham, P. J., Frietze, S., O'Geen, H., Xu, X., Blahnik, K. R., Cao, A. R., Iyengar, S., Kaul, R., Thurman, R. E., Wang, H., Navas, P. A., Sandstrom, R., Sabo, P. J., Weaver, M., Canfield, T., Lee, K., Neph, S., Roach, V., Reynolds, A., Johnson, A., Rynes, E., Giste, E., Vong, S., Neri, J., Frum, T., Nguyen, E. D., Ebersol, A. K., Sanchez, M. E., Sheffer, H. H., Lotakis, D., Haugen, E., Humbert, R., Kutyavin, T., Shafer, T., Noble, W. S., Dekker, J., Lajoie, B. R., Sanyal, A., Rosenbloom, K. R., Dreszer, T. R., Raney, B. J., Barber, G. P., Meyer, L. R., Sloan, C. A., Malladi, V. S., Cline, M. S., Learned, K., Swing, V. K., Zweig, A. S., Rhead, B., Fujita, P. A., Roskin, K., Karolchik, D., Kuhn, R. M., Wilder, S. P., Sobral, D., Herrero, J., Beal, K., Lukk, M., Brazma, A., Vaquerizas, J. M., Luscombe, N. M., Bickel, P. J., Boley, N., Brown, J. B., Li, Q., Huang, H., Sboner, A., Yip, K. Y., Cheng, C., Yan, K. K., Bhardwaj, N., Wang, J., Lochovsky, L., Jee, J., Gibson, T., Leng, J., Du, J., Harris, R. S., Song, G., Miller, W., Suh, B., Paten, B., Hoffman, M. M., Buske, O. J., Weng, Z., Dong, X., Wang, J., Xi, H., Tenenbaum, S. A., Doyle, F., Chittur, S., Penalva, L. O., Tullius, T. D., White, K. P., Karmakar, S., Victorsen, A., Jameel, N., Bild, N., Grossman, R. L., Collins, P. J., Trinklein, N. D., Giddings, M. C., Khatun, J., Maier, C., Wang, T., Whitfield, T. W., Chen, X., Yu, Y., Gunawardena, H., Feingold, E. A., Lowdon, R. F., Dillon, L. A. L., Good, P. J. & Risk, B., Apr 1 2011, In : PLoS biology. 9, 4, e1001046.

Research output: Contribution to journalArticle

949 Scopus citations

Autarky and material contingencies in Italian architectural debate (1936-1954)

Aviles Rincon, L., Dec 1 2009, In : Footprint. 4, p. 21-34 14 p.

Research output: Contribution to journalArticle

1 Scopus citations

Author Correction: Two-level factorial experiments (Nature Methods, (2019), 16, 3, (211-212), 10.1038/s41592-019-0335-9)

Smucker, B., Krzywinski, M. & Altman, N., May 1 2019, In : Nature methods. 16, 5, 1 p.

Research output: Contribution to journalComment/debate

Open Access

Author Correction: Tabular data (Nature Methods, (2017), 14, 4, (329-330), 10.1038/nmeth.4239)

Altman, N. & Krzywinski, M., Jul 1 2019, In : Nature methods. 16, 7, 1 p.

Research output: Contribution to journalComment/debate

Open Access

Autologistic models for binary data on a lattice

Hughes, J., Haran, M. & Caragea, P. C., Nov 1 2011, In : Environmetrics. 22, 7, p. 857-871 15 p.

Research output: Contribution to journalArticle

40 Scopus citations

Automated factor slice sampling

Tibbits, M. M., Groendyke, C., Haran, M. & Liechty, J. C., Jan 1 2014, In : Journal of Computational and Graphical Statistics. 23, 2, p. 543-563 21 p.

Research output: Contribution to journalArticle

7 Scopus citations

Automated scoring of polygraph data

Slavkovic, A. B., Jan 1 2003, Statistical Data Mining and Knowledge Discovery. CRC Press, p. 135-154 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Automatic and computationally efficient method for model selection in inertial sensor calibration

Molinari, R., Balamuta, J., Guerrier, S., Zhang, X. & Skaloud, J., Jan 1 2015, 28th International Technical Meeting of the Satellite Division of the Institute of Navigation, ION GNSS 2015. Institute of Navigation, p. 2003-2006 4 p. (28th International Technical Meeting of the Satellite Division of the Institute of Navigation, ION GNSS 2015; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Automatic Identification and Calibration of Stochastic Parameters in Inertial Sensors

Guerrier, S., Molinari, R. & Skaloud, J., Dec 1 2015, In : Navigation, Journal of the Institute of Navigation. 62, 4, p. 265-272 8 p.

Research output: Contribution to journalArticle

11 Scopus citations

Automatic image semantic interpretation using social action and tagging data

Sawant, N., Li, J. & Wang, J. Z., Jan 1 2011, In : Multimedia Tools and Applications. 51, 1, p. 213-246 34 p.

Research output: Contribution to journalArticle

36 Scopus citations
864 Scopus citations

Automatic structure discovery for varying-coefficient partially linear models

Yang, G., Sun, Y. & Cui, X., Aug 3 2017, In : Communications in Statistics - Theory and Methods. 46, 15, p. 7703-7716 14 p.

Research output: Contribution to journalArticle

1 Scopus citations

Autoregressive Planet Search: Application to the Kepler Mission

Caceres, G. A., Feigelson, E. D., Babu, G. J., Bahamonde, N., Christen, A., Bertin, K., Meza, C. & Curé, M., Jan 1 2019, In : Astronomical Journal. 158, 2, 58.

Research output: Contribution to journalArticle

2 Scopus citations

Autoregressive Planet Search: Methodology

Caceres, G. A., Feigelson, E. D., Babu, G. J., Bahamonde, N., Christen, A., Bertin, K., Meza, C. & Curé, M., Jan 1 2019, In : Astronomical Journal. 158, 2, 57.

Research output: Contribution to journalArticle

2 Scopus citations

Autoregressive times series methods for time domain astronomy

Feigelson, E. D., Jogesh Babu, G. & Caceres, G. A., Aug 7 2018, In : Frontiers in Physics. 6, AUG, 80.

Research output: Contribution to journalArticle

12 Scopus citations

A validated information criterion to determine the structural dimension in dimension reduction models

Ma, Y. & Zhang, X., Jan 1 2015, In : Biometrika. 102, 2, p. 409-420 12 p.

Research output: Contribution to journalArticle

11 Scopus citations

A varying threshold method for ChIP peak-calling using multiple sources of information

Chen, K. B. & Zhang, Y., Sep 4 2010, In : Bioinformatics. 26, 18, p. i504-i510 btq379.

Research output: Contribution to journalArticle

5 Scopus citations

Averaging almost-periodic functions and finite-dimensional unitary representations on free groups

Gorbis, A. & Tempelman, A., Oct 1 1988, In : Lithuanian Mathematical Journal. 28, 4, p. 332-335 4 p.

Research output: Contribution to journalArticle

Averaging sequences and modulated ergodic theorems for weakly almost periodic group representations

Lin, M. & Tempelman, A., Jan 1 1999, In : Journal d'Analyse Mathematique. 77, p. 237-268 32 p.

Research output: Contribution to journalArticle

6 Scopus citations

Balanced incomplete Latin square designs

Ai, M., Li, K., Liu, S. & Lin, D. K. J., Sep 1 2013, In : Journal of Statistical Planning and Inference. 143, 9, p. 1575-1582 8 p.

Research output: Contribution to journalArticle

15 Scopus citations

Balancing Covariates via Propensity Score Weighting

Li, F., Morgan, K. L. & Zaslavsky, A. M., Jan 2 2018, In : Journal of the American Statistical Association. 113, 521, p. 390-400 11 p.

Research output: Contribution to journalArticle

64 Scopus citations

Bandwidth selection for kernel distribution function estimation

Altman, N. & Léger, C., Aug 1 1995, In : Journal of Statistical Planning and Inference. 46, 2, p. 195-214 20 p.

Research output: Contribution to journalArticle

100 Scopus citations

Bandwidth selection in an EM-like algorithm for nonparametric multivariate mixtures

Benaglia, T., Chauveau, D. & Hunter, D. R., Jan 1 2011, Nonparametric Statistics and Mixture Models: A Festschrift in Honor of Thomas P Hettmansperger. World Scientific Publishing Co., p. 15-27 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

11 Scopus citations

Batches and Blocks, Sample Pools and Subsamples in the Design and Analysis of Gene Expression Studies

Altman, N., Nov 2 2009, Batch Effects and Noise in Microarray Experiments: Sources and Solutions. Wiley-Blackwell, p. 33-50 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Baum-Welch algorithm on directed acyclic graph for mixtures with latent Bayesian networks

Li, J. & Lin, L., Jan 1 2017, In : Stat. 6, 1, p. 303-314 12 p.

Research output: Contribution to journalArticle

Bayes estimation of component-reliability from masked system-life data

Lin, D. K. J., Usher, J. S. & Guess, F. M., Dec 1 1996, In : IEEE Transactions on Reliability. 45, 2, p. 233-237 5 p.

Research output: Contribution to journalArticle

39 Scopus citations

Bayesian analysis for weighted mean-squared error in dual response surface optimization

Jeong, I. J., Kim, K. J. & Lin, D. K. J., Jul 1 2010, In : Quality and Reliability Engineering International. 26, 5, p. 417-430 14 p.

Research output: Contribution to journalArticle

13 Scopus citations

Bayesian analysis of genome-wide inflammatory bowel disease data sets reveals new risk loci /631/208/205/2138 /631/208/176 article

Zhang, Y., Tian, L., Sleiman, P., Ghosh, S. & Hakonarson, H., Feb 1 2018, In : European Journal of Human Genetics. 26, 2, p. 265-274 10 p.

Research output: Contribution to journalArticle

7 Scopus citations

Bayesian combination of state polls and election forecasts

Lock, K. & Gelman, A., Mar 25 2010, In : Political Analysis. 18, 3, p. 337-348 12 p.

Research output: Contribution to journalArticle

23 Scopus citations

Bayesian D-optimal supersaturated designs

Jones, B., Lin, D. K. J. & Nachtsheim, C. J., Jan 1 2008, In : Journal of Statistical Planning and Inference. 138, 1, p. 86-92 7 p.

Research output: Contribution to journalArticle

35 Scopus citations

Bayesian epistasis association mapping via SNP imputation

Zhang, Y., Apr 1 2011, In : Biostatistics. 12, 2, p. 211-222 12 p.

Research output: Contribution to journalArticle

3 Scopus citations

Bayesian estimates of astronomical time delays between gravitationally lensed stochastic light curves

Tak, H., Mandel, K., Van Dyk, D. A., Kashyap, V. L., Meng, X. L. & Siemiginowska, A., Sep 2017, In : Annals of Applied Statistics. 11, 3, p. 1309-1348 40 p.

Research output: Contribution to journalArticle

7 Scopus citations

Bayesian Estimation of MSM Population Size in Côte d’Ivoire

Datta, A., Lin, W., Rao, A., Diouf, D., Kouame, A., Edwards, J. K., Bao, L., Louis, T. A. & Baral, S., Jan 1 2019, In : Statistics and Public Policy. 6, 1, p. 1-13 13 p.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Bayesian group lasso for nonparametric varying-coefficient models with application to functional genome-wide association studies

Li, J., Wang, Z., Li, R. & Wu, R., Jun 1 2015, In : Annals of Applied Statistics. 9, 2, p. 640-664 25 p.

Research output: Contribution to journalArticle

23 Scopus citations

Bayesian Inference for Contact Networks Given Epidemic Data

Groendyke, C., Welch, D. & Hunter, D. R., Sep 1 2011, In : Scandinavian Journal of Statistics. 38, 3, p. 600-616 17 p.

Research output: Contribution to journalArticle

27 Scopus citations

Bayesian Inference in the Presence of Intractable Normalizing Functions

Park, J. & Haran, M., Jul 3 2018, In : Journal of the American Statistical Association. 113, 523, p. 1372-1390 19 p.

Research output: Contribution to journalReview article

4 Scopus citations

Bayesian inference of epistatic interactions in case-control studies

Zhang, Y. & Liu, J. S., Sep 1 2007, In : Nature Genetics. 39, 9, p. 1167-1173 7 p.

Research output: Contribution to journalArticle

332 Scopus citations

Bayesian models for detecting epistatic interactions from genetic data

Zhang, Y., Jiang, B., Zhu, J. & Liu, J. S., Jan 1 2011, In : Annals of Human Genetics. 75, 1, p. 183-193 11 p.

Research output: Contribution to journalArticle

17 Scopus citations

Bayesian multidimensional scaling procedure with variable selection

Lin, L. & Fong, D. K. H., Jan 2019, In : Computational Statistics and Data Analysis. 129, p. 1-13 13 p.

Research output: Contribution to journalArticle

1 Scopus citations

Bayesian spatial extreme value analysis to assess the changing risk of concurrent high temperatures across large portions of European cropland

Shaby, B. A. & Reich, B. J., Dec 1 2012, In : Environmetrics. 23, 8, p. 638-648 11 p.

Research output: Contribution to journalArticle

23 Scopus citations

Benefits and pitfalls of the exponential mechanism with applications to Hilbert spaces and functional PCA

Awan, J., Kenney, A., Reimherr, M. & Slavković, A., Jan 1 2019, 36th International Conference on Machine Learning, ICML 2019. International Machine Learning Society (IMLS), p. 577-587 11 p. (36th International Conference on Machine Learning, ICML 2019; vol. 2019-June).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Beyond saliency: Assessing visual balance with high-level cues

Kandemir, B., Zhou, Z., Li, J. & Wang, J. Z., Oct 23 2017, Thematic Workshops 2017 - Proceedings of the Thematic Workshops of ACM Multimedia 2017, co-located with MM 2017. Association for Computing Machinery, Inc, p. 26-34 9 p. (Thematic Workshops 2017 - Proceedings of the Thematic Workshops of ACM Multimedia 2017, co-located with MM 2017).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Scopus citations

Bias correction and bayesian model averaging for ensemble forecasts of surface wind direction

Bao, L., Gneiting, T., Grimit, E. P., Guttorp, P. & Raftery, A. E., May 1 2010, In : Monthly Weather Review. 138, 5, p. 1811-1821 11 p.

Research output: Contribution to journalArticle

46 Scopus citations