Research Output

Revealing mammalian evolutionary relationships by comparative analysis of gene clusters

Song, G., Riemer, C., Dickins, B., Kim, H. L., Zhang, L., Zhang, Y., Hsu, C. H., Hardison, R. C., Green, E. D. & Miller, W., Sep 24 2012, In : Genome biology and evolution. 4, 4, p. 586-601 16 p.

Research output: Contribution to journalArticle

8 Scopus citations

Retrovirus insertion site analysis of LGL leukemia patient genomes

Li, W., Yang, L., Harris, R. S., Lin, L., Olson, T. L., Hamele, C. E., Feith, D. J., Loughran, T. P. & Poss, M., Jun 17 2019, In : BMC Medical Genomics. 12, 1, 88.

Research output: Contribution to journalArticle

Open Access
2 Scopus citations

Restricted spatial regression in practice: Geostatistical models, confounding, and robustness under model misspecification

Hanks, E. M., Schliep, E. M., Hooten, M. B. & Hoeting, J. A., Jun 1 2015, In : Environmetrics. 26, 4, p. 243-254 12 p.

Research output: Contribution to journalArticle

53 Scopus citations

Responses of lean and obese boys to repeated summer exercise in the heat bouts

Dougherty, K. A., Chow, M. & Kenney, W. L., Feb 1 2009, In : Medicine and science in sports and exercise. 41, 2, p. 279-289 11 p.

Research output: Contribution to journalArticle

22 Scopus citations

Response

Kettaneh-Wold, N. & Lin, D. K. J., Jan 1 1995, In : Technometrics. 37, 3, 1 p.

Research output: Contribution to journalArticle

1 Scopus citations

Response: Remain steadfast with the St. Petersburg Paradox to quantify irrational exuberance

Székely, G. J. & Richards, D. S. P., Aug 1 2005, In : American Statistician. 59, 3, p. 235-239 5 p.

Research output: Contribution to journalReview article

2 Scopus citations

Resolution V.2 search designs

Chatterjee, K., Deng, L. Y. & Lin, D. K. J., Dec 1 2000, In : Communications in Statistics - Theory and Methods. 29, 5-6, p. 1143-1154 12 p.

Research output: Contribution to journalArticle

Rescuing Alu: Recovery of New Inserts Shows LINE-1 Preserves Alu Activity through A-Tail Expansion

Wagstaff, B. J., Hedges, D. J., Derbes, R. S., Campos Sanchez, R., Chiaromonte, F., Makova, K. D. & Roy-Engel, A. M., Aug 1 2012, In : PLoS genetics. 8, 8, e1002842.

Research output: Contribution to journalArticle

25 Scopus citations

Re-sampling methods for testing for location against unrestricted and ordered alternatives

Babu, G. J. & Padmanabhan, A. R., Nov 1 2007, In : Journal of Statistical Planning and Inference. 137, 11, p. 3261-3267 7 p.

Research output: Contribution to journalArticle

2 Scopus citations

Resampling methods for model fitting and model selection

Babu, G. J., Dec 1 2011, In : Journal of Biopharmaceutical Statistics. 21, 6, p. 1177-1186 10 p.

Research output: Contribution to journalArticle

8 Scopus citations

Rerandomization to improve covariate balance in experiments

Morgan, K. L. & Rubin, D. B., Apr 1 2012, In : Annals of Statistics. 40, 2, p. 1263-1282 20 p.

Research output: Contribution to journalArticle

60 Scopus citations

Rerandomization to Balance Tiers of Covariates

Morgan, K. L. & Rubin, D. B., Oct 2 2015, In : Journal of the American Statistical Association. 110, 512, p. 1412-1421 10 p.

Research output: Contribution to journalArticle

15 Scopus citations

Reproductive responses to mycorrhizal colonization of Abutilon theophrasti Medic, plants grown for two generations in the field

SHUMWAY, DURLAND. L. & KOIDE, ROGER. T., Oct 1994, In : New Phytologist. 128, 2, p. 219-224 6 p.

Research output: Contribution to journalArticle

16 Scopus citations
2 Scopus citations

Replication, variation and normalisation in microarray experiments

Altman, N. S., Aug 5 2005, In : Applied Bioinformatics. 4, 1, p. 33-44 12 p.

Research output: Contribution to journalArticle

38 Scopus citations

Relations between physical habitat and American eel abundance in five river basins in Maryland

Wiley, D. J., Morgan, R. P., Hilderbrand, R. H., Raesly, R. L. & Shumway, D. L., May 1 2004, In : Transactions of the American Fisheries Society. 133, 3, p. 515-526 12 p.

Research output: Contribution to journalArticle

16 Scopus citations

Rejoinder on: Augmenting the bootstrap to analyze high dimensional genomic data

Tyekucheva, S. & Chiaromonte, F., May 1 2008, In : Test. 17, 1, p. 47-55 9 p.

Research output: Contribution to journalComment/debate

Rejoinder

Hunter, D. R. & Lange, K., Mar 2000, In : Journal of Computational and Graphical Statistics. 9, 1, p. 52-59 8 p.

Research output: Contribution to journalArticle

20 Scopus citations

Rejoinder

Lin, D. K. J. & Peng, J., Jan 2 2019, In : Quality Engineering. 31, 1, p. 69-72 4 p.

Research output: Contribution to journalComment/debate

Rejoinder

Akritas, M. G., Kuha, J. & Osgood, D. W., Jan 1 2002, In : Sociological Methods and Research. 30, 3, p. 460-462 3 p.

Research output: Contribution to journalComment/debate

Rejoinder: One-step sparse estimates in nonconcave penalized likelihood models

Zou, H. & Li, R., Aug 1 2008, In : Annals of Statistics. 36, 4, p. 1561-1566 6 p.

Research output: Contribution to journalReview article

16 Scopus citations

Rejoinder

Cook, R. D., Li, B., Chiaromonte, F. & Su, Z., Jul 2010, In : Statistica Sinica. 20, 3, p. 999-1010 12 p.

Research output: Contribution to journalComment/debate

Rejoinder

Altman, N., Angers, J. F., Banks, D., Duffy, D., Hardwick, J., Léger, C., Martin, M., Nolan, D., Owen, A., Politis, D., Roeder, K., Sriram, T. N., Stukel, T. & Ying, Z., May 1992, In : Statistical Science. 7, 2, p. 265-266 2 p.

Research output: Contribution to journalArticle

3 Scopus citations

Regulatory potential scores from genome-wide three-way alignments of human, mouse, and rat

Kolbe, D., Taylor, J., Elnitski, L., Eswara, P., Li, J., Miller, W., Hardison, R. & Chiaromonte, F., Apr 1 2004, In : Genome research. 14, 4, p. 700-707 8 p.

Research output: Contribution to journalArticle

84 Scopus citations

Regularized rank-based estimation of high-dimensional nonparanormal graphical models

Xue, L. & Zou, H., Oct 1 2012, In : Annals of Statistics. 40, 5, p. 2541-2571 31 p.

Research output: Contribution to journalArticle

98 Scopus citations

Regularized quantile regression and robust feature screening for single index models

Zhong, W., Zhu, L., Li, R. & Cui, H., Jan 2016, In : Statistica Sinica. 26, 1, p. 69-95 27 p.

Research output: Contribution to journalArticle

14 Scopus citations

Regularization parameter selections via generalized information criterion

Zhang, Y., Li, R. & Tsai, C. L., Mar 1 2010, In : Journal of the American Statistical Association. 105, 489, p. 312-323 12 p.

Research output: Contribution to journalArticle

130 Scopus citations

Regret theory and the competitive firm: A comment

Niu, C., Guo, X., Wang, T. & Xu, P., Jan 1 2014, In : Economic Modelling. 41, p. 312-315 4 p.

Research output: Contribution to journalArticle

5 Scopus citations

Regression with spatially misaligned data

Madsen, L., Ruppert, D. & Altman, N. S., Aug 1 2008, In : Environmetrics. 19, 5, p. 453-467 15 p.

Research output: Contribution to journalArticle

29 Scopus citations

Regression tools for CO2 inversions: Application of a shrinkage estimator to process attribution

Shaby, B. A. & Field, C. B., Sep 1 2006, In : Tellus, Series B: Chemical and Physical Meteorology. 58, 4, p. 279-292 14 p.

Research output: Contribution to journalArticle

3 Scopus citations

Regression hidden Markov modeling reveals heterogeneous gene expression regulation: A case study in mouse embryonic stem cells

Lee, Y., Ghosh, D. & Zhang, Y., May 12 2014, In : BMC genomics. 15, 1, 360.

Research output: Contribution to journalArticle

2 Scopus citations

Regression analysis for massive datasets

Fan, T. H., Lin, D. K. J. & Cheng, K. F., Jun 1 2007, In : Data and Knowledge Engineering. 61, 3, p. 554-562 9 p.

Research output: Contribution to journalArticle

12 Scopus citations

Reflected Stochastic Differential Equation Models for Constrained Animal Movement

Hanks, E. M., Johnson, D. S. & Hooten, M. B., Sep 1 2017, In : Journal of Agricultural, Biological, and Environmental Statistics. 22, 3, p. 353-372 20 p.

Research output: Contribution to journalArticle

5 Scopus citations

Refinement of optical map assemblies

Valouev, A., Zhang, Y., Schwartz, D. C. & Waterman, M. S., May 15 2006, In : Bioinformatics. 22, 10, p. 1217-1224 8 p.

Research output: Contribution to journalArticle

23 Scopus citations

Redundant MEMS-IMU integrated with GPS for performance assessment in sports

Waegli, A., Guerrier, S. & Skaloud, J., Nov 10 2008, 2008 IEEE/ION Position, Location and Navigation Symposium, PLANS. p. 1260-1268 9 p. 4570079. (Record - IEEE PLANS, Position Location and Navigation Symposium).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

50 Scopus citations

Reducing the germinable weed seedbank with soil disturbance and cover crops

Mirsky, S. B., Gallandt, E. R., Mortensen, D., Curran, W. & Shumway, D. L., Aug 1 2010, In : Weed Research. 50, 4, p. 341-352 12 p.

Research output: Contribution to journalArticle

35 Scopus citations

Reconstructing the evolutionary history of complex human gene clusters

Zhang, Y., Song, G., Vinař, T., Green, E. D., Siepel, A. & Miller, W., Jul 21 2008, Research in Computational Molecular Biology - 12th Annual International Conference, RECOMB 2008, Proceedings. p. 29-49 21 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4955 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

12 Scopus citations

Reconciling resource utilization and resource selection functions

Hooten, M. B., Hanks, E. M., Johnson, D. S. & Alldredge, M. W., Nov 1 2013, In : Journal of Animal Ecology. 82, 6, p. 1146-1154 9 p.

Research output: Contribution to journalArticle

30 Scopus citations

Reconciling multiple data sources to improve accuracy of large-scale prediction of forest disease incidence

Hanks, E. M., Hooten, M. B. & Baker, F. A., Jun 1 2011, In : Ecological Applications. 21, 4, p. 1173-1188 16 p.

Research output: Contribution to journalArticle

18 Scopus citations

Recent history functional linear models for sparse longitudinal data

Kim, K., Şentürk, D. & Li, R., Apr 1 2011, In : Journal of Statistical Planning and Inference. 141, 4, p. 1554-1566 13 p.

Research output: Contribution to journalArticle

9 Scopus citations

Recent history functional linear models

Kim, K., Sentürk, D. & Li, R., Jan 1 2011, Nonparametric Statistics and Mixture Models: A Festschrift in Honor of Thomas P Hettmansperger. World Scientific Publishing Co., p. 169-182 14 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Recent Advances and Trends in Nonparametric Statistics

Akritas, M. G. & Politis, D. N., Oct 2003, Elsevier B.V. 512 p.

Research output: Book/ReportBook

11 Scopus citations

Real-time computerized annotation of pictures

Li, J. & Wang, J. Z., Dec 1 2006, Proceedings of the 14th Annual ACM International Conference on Multimedia, MM 2006. p. 911-920 10 p. (Proceedings of the 14th Annual ACM International Conference on Multimedia, MM 2006).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

139 Scopus citations

Real-time computerized annotation of pictures

Li, J. & Wang, J. Z., Jun 1 2008, In : IEEE Transactions on Pattern Analysis and Machine Intelligence. 30, 6, p. 985-1002 18 p.

Research output: Contribution to journalArticle

329 Scopus citations

Rapid optical variations correlated with X-rays in the 2015 second outburst of V404 Cygni (GS 2023+338)

Kimura, M., Kato, T., Isogai, K., Tak, H., Shidatsu, M., Itoh, H., Tordai, T., Kasai, K., Goff, W., Kiyota, S., Pickard, R. D., Matsumoto, K., Kojiguchi, N., Sugiura, Y., Yamada, E., Tatsumi, T., Miyashita, A., Dubovsky, P. A., Kudzej, I., de Miguel, E. & 7 others, Stein, W. L., Maeda, Y., Pavlenko, E. P., Sosnovskij, A. A., Babina, J. V., Cook, L. M. & Nogami, D., Jan 1 2017, In : Monthly Notices of the Royal Astronomical Society. 471, 1, p. 373-382 10 p.

Research output: Contribution to journalArticle

8 Scopus citations

Rapid induction of halothane anaesthesia in man

Ruffle, J. M., Snider, M. T., Rosenberger, J. L. & Latta, W. B., Jun 1985, In : British Journal of Anaesthesia. 57, 6, p. 607-611 5 p.

Research output: Contribution to journalArticle

50 Scopus citations

Rank transform statistics with censored data

Akritas, M. G., Feb 19 1992, In : Statistics and Probability Letters. 13, 3, p. 209-221 13 p.

Research output: Contribution to journalArticle

18 Scopus citations

Rank tests in heteroscedastic multi-way HANOVA

Wang, H. & Akritas, M. G., Aug 1 2009, In : Journal of Nonparametric Statistics. 21, 6, p. 663-681 19 p.

Research output: Contribution to journalArticle

3 Scopus citations

Rank tests for patterned alternatives in two-way non-parametric analysis of variance

Callegari, F. & Akritas, M. G., Nov 1 2004, In : Journal of Statistical Planning and Inference. 126, 1, p. 1-23 23 p.

Research output: Contribution to journalArticle

2 Scopus citations