Research Output 1973 2020

Article
6 Citations (Scopus)

A systematic approach for the construction of definitive screening designs

Phoa, F. K. H. & Lin, D. K. J., Jul 2015, In : Statistica Sinica. 25, 3, p. 853-861 9 p.

Research output: Contribution to journalArticle

Screening Design
D-efficiency
Even number
Odd number
Screening
22 Citations (Scopus)

A systematic review and meta-analysis of salivary cortisol measurement in domestic canines

Cobb, M. L., Iskandarani, K., Chinchilli, V. & Dreschel, N. A., Oct 1 2016, In : Domestic Animal Endocrinology. 57, p. 31-42 12 p.

Research output: Contribution to journalArticle

systematic review
meta-analysis
cortisol
Hydrocortisone
Meta-Analysis
1 Citation (Scopus)
Hormone Replacement Therapy
Coronary Disease
Meta-Analysis
Stroke
Regression Analysis
119 Citations (Scopus)

A test for partial correlation with censored astronomical data

Akritas, M. G. & Siebert, J., Jan 1 1996, In : Monthly Notices of the Royal Astronomical Society. 278, 4, p. 919-924 6 p.

Research output: Contribution to journalArticle

luminosity
active galactic nuclei
methodology
radio
coefficients
19 Citations (Scopus)

A third giant planet orbiting HIP 14810

Wright, J. T., Fischer, D. A., Ford, E. B., Veras, D., Wang, J., Henry, G. W., Marcy, G. W., Howard, A. W. & Johnson, J. A., Jan 1 2009, In : Astrophysical Journal. 699, 2 PART 2, p. L97-L101

Research output: Contribution to journalArticle

hot isostatic pressing
planets
planet
orbitals
stars
2 Citations (Scopus)

A three-groups model for high-throughput survival screens

Shaby, B. A., Skibinski, G., Ando, M., LaDow, E. S. & Finkbeiner, S., Sep 1 2016, In : Biometrics. 72, 3, p. 936-944 9 p.

Research output: Contribution to journalArticle

Amyotrophic Lateral Sclerosis
High Throughput
Neurons
Neuron
neurons

A time varying approach to the stock return–inflation puzzle

Li, X. & Zhao, Z., Jan 1 2019, (Accepted/In press) In : Journal of the Royal Statistical Society. Series C: Applied Statistics.

Research output: Contribution to journalArticle

Change-point Analysis
Inflation
Time-varying
Local Stationarity
Stock Returns
Copula Models
Recurrent Events
Hierarchical Model
Myocardial Infarction
Time-varying
2 Citations (Scopus)

A time-varying effect model for examining group differences in trajectories of zero-inflated count outcomes with applications in substance abuse research

Yang, S., Cranford, J. A., Jester, J. M., Li, R., Zucker, R. A. & Buu, A., Feb 28 2017, In : Statistics in Medicine. 36, 5, p. 827-837 11 p.

Research output: Contribution to journalArticle

Sample Size
Substance-Related Disorders
Time-varying
Count
Trajectory
125 Citations (Scopus)

A time-varying effect model for intensive longitudinal data

Tan, X., Shiyko, M. P., Li, R., Li, Y. & Dierker, L., Mar 1 2012, In : Psychological Methods. 17, 1, p. 61-77 17 p.

Research output: Contribution to journalArticle

Behavioral Sciences
Smoking Cessation
Self Efficacy
Smoking
Psychology
3 Citations (Scopus)

A time-varying effect model for studying gender differences in health behavior

Yang, S., Cranford, J. A., Li, R., Zucker, R. A. & Buu, A., Dec 1 2017, In : Statistical Methods in Medical Research. 26, 6, p. 2812-2820 9 p.

Research output: Contribution to journalArticle

Gender Differences
Health Behavior
Time-varying
Sample Size
Health
104 Citations (Scopus)

A trial of clarithromycin for the treatment of suboptimally controlled asthma

Sutherland, E. R., King, T. S., Icitovic, N., Ameredes, B. T., Bleecker, E., Boushey, H. A., Calhoun, W. J., Castro, M., Cherniack, R. M., Chinchilli, V. M., Craig, T. J., Denlinger, L., Dimango, E. A., Fahy, J. V., Israel, E., Jarjour, N., Kraft, M., Lazarus, S. C., Lemanske, R. F., Peters, S. P. & 8 others, Ramsdell, J., Sorkness, C. A., Szefler, S. J., Walter, M. J., Wasserman, S. I., Wechsler, M. E., Chu, H. W. & Martin, R. J., Oct 1 2010, In : Journal of Allergy and Clinical Immunology. 126, 4, p. 747-753 7 p.

Research output: Contribution to journalArticle

Clarithromycin
Asthma
Polymerase Chain Reaction
Pneumonia
Therapeutics
750 Citations (Scopus)

A Tutorial on MM Algorithms

Hunter, D. R. & Lange, K., Feb 2004, In : American Statistician. 58, 1, p. 30-37 8 p.

Research output: Contribution to journalArticle

EM Algorithm
Likelihood
Missing Data
Optimization
Error Estimation
68 Citations (Scopus)

A two-stage Bayesian model selection strategy for supersaturated designs

Beattie, S. D., Fong, D. K. H. & Lin, D. K. J., Feb 1 2002, Technometrics, 44, 1, p. 55-63 9 p.

Research output: Contribution to specialist publicationArticle

Supersaturated Design
Bayesian Model Selection
Two-stage Model
Stepwise Regression
Noninformative Prior
8 Citations (Scopus)

A two-stage model for incidence and prevalence in point-level spatial count data

Recta, V., Haran, M. & Rosenberger, J. L., Mar 1 2012, In : Environmetrics. 23, 2, p. 162-174 13 p.

Research output: Contribution to journalArticle

Two-stage Model
Count Data
Spatial Data
spatial data
Incidence
3 Citations (Scopus)

Augmenting supersaturated designs with Bayesian D-optimality

Gutman, A. J., White, E. D., Lin, D. K. J. & Hill, R. R., Mar 1 2014, In : Computational Statistics and Data Analysis. 71, p. 1147-1158 12 p.

Research output: Contribution to journalArticle

Supersaturated Design
D-optimality
Information use
Optimality Criteria
Augmentation
6 Citations (Scopus)

Augmenting the bootstrap to analyze high dimensional genomic data

Tyekucheva, S. & Chiaromonte, F., May 1 2008, In : Test. 17, 1, p. 1-18 18 p.

Research output: Contribution to journalArticle

Bootstrap
Genomics
High-dimensional
Covariance matrix
DNA Microarray
94 Citations (Scopus)

A unified approach to rank tests for mixed models

Akritas, M. G. & Brunner, E., Jun 16 1997, In : Journal of Statistical Planning and Inference. 61, 2, p. 249-277 29 p.

Research output: Contribution to journalArticle

Nonparametric Hypotheses
Rank Test
Mixed Model
Statistics
Rank Statistics

A unified DNA sequence and non-DNA sequence mapping model of complex traits

Zeng, Y., Zhu, X., Chen, C., Banerjee, K., Sun, L., Yu, W., Zheng, B. & Wu, R., Jan 1 2019, In : Plant Journal. 99, 4, p. 784-795 12 p.

Research output: Contribution to journalArticle

quantitative trait loci
Quantitative Trait Loci
nucleotide sequences
Taxaceae
Gymnosperms
12 Citations (Scopus)

A unified framework for detecting rare variant quantitative trait associations in pedigree and unrelated individuals via sequence data

Liu, D. & Leal, S. M., May 1 2012, In : Human heredity. 73, 2, p. 105-122 18 p.

Research output: Contribution to journalArticle

Pedigree
Population Genetics
Genetic Association Studies
Sequence Analysis
Costs and Cost Analysis
5 Citations (Scopus)

A Unified Method for Detecting Secondary Trait Associations with Rare Variants: Application to Sequence Data

Liu, D. J. & Leal, S. M., Nov 1 2012, In : PLoS genetics. 8, 11, e1003075.

Research output: Contribution to journalArticle

Blood Pressure
testing
LDL Lipoproteins
Italy
quantitative traits
27 Citations (Scopus)

A unified statistical model for functional mapping of environment-dependent genetic expression and genotype X environment interactions for ontogenetic development

Zhao, W., Zhu, J., Gallo-Meagher, M. & Wu, R., Nov 1 2004, In : Genetics. 168, 3, p. 1751-1762 12 p.

Research output: Contribution to journalArticle

Quantitative Trait Loci
Statistical Models
Genotype
Growth
Genetic Epistasis
8 Citations (Scopus)

A unifying framework for bivalent multilocus linkage analysis of allotetraploids

Yang, X., Lv, Y., Pang, X., Tong, C., Wang, Z., Li, X., Feng, S., Tobias, C. M. & Wu, R., Jan 1 2013, In : Briefings in bioinformatics. 14, 1, p. 96-108 13 p., bbs011.

Research output: Contribution to journalArticle

Chromosomes
Diploidy
Panicum
Genetic Linkage
Tetraploidy
37 Citations (Scopus)

A unifying statistical model for QTL mapping of genotype X sex interaction for developmental trajectories

Zhao, W., Ma, C., Cheverud, J. M. & Wu, R., Jan 1 2005, In : Physiological genomics. 19, p. 218-227 10 p.

Research output: Contribution to journalArticle

Quantitative Trait Loci
Statistical Models
Genotype
Growth
Sex Differentiation
930 Citations (Scopus)

A user's guide to the Encyclopedia of DNA elements (ENCODE)

Myers, R. M., Stamatoyannopoulos, J., Snyder, M., Dunham, I., Hardison, R. C., Bernstein, B. E., Gingeras, T. R., Kent, W. J., Birney, E., Wold, B., Crawford, G. E., Epstein, C. B., Shoresh, N., Ernst, J., Mikkelsen, T. S., Kheradpour, P., Zhang, X., Wang, L., Issner, R., Coyne, M. J. & 295 others, Durham, T., Ku, M., Truong, T., Ward, L. D., Altshuler, R. C., Lin, M. F., Kellis, M., Davis, C. A., Kapranov, P., Dobin, A., Zaleski, C., Schlesinger, F., Batut, P., Chakrabortty, S., Jha, S., Lin, W., Drenkow, J., Wang, H., Bell, K., Bell, I., Gao, H., Dumais, E., Dumais, J., Antonarakis, S. E., Ucla, C., Borel, C., Guigo, R., Djebali, S., Lagarde, J., Kingswood, C., Ribeca, P., Sammeth, M., Alioto, T., Merkel, A., Tilgner, H., Carninci, P., Hayashizaki, Y., Lassmann, T., Takahashi, H., Abdelhamid, R. F., Hannon, G., Fejes, K. T., Preall, J., Gordon, A., Sotirova, V., Reymond, A., Howald, C., Graison, E. A. Y., Chrast, J., Ruan, Y., Ruan, X., Shahab, A., Poh, W. T., Wei, C. L., Furey, T. S., Boyle, A. P., Sheffield, N. C., Song, L., Shibata, Y., Vales, T., Winter, D., Zhang, Z., London, D., Wang, T., Keefe, D., Iyer, V. R., Lee, B. K., McDaniell, R. M., Liu, Z., Battenhouse, A., Bhinge, A. A., Lieb, J. D., Grasfeder, L. L., Showers, K. A., Giresi, P. G., Kim, S. K. C., Shestak, C., Pauli, F., Reddy, T. E., Gertz, J., Partridge, E. C., Jain, P., Sprouse, R. O., Bansal, A., Pusey, B., Muratet, M. A., Varley, K. E., Bowling, K. M., Newberry, K. M., Nesmith, A. S., Dilocker, J. A., Parker, S. L., Waite, L. L., Thibeault, K., Roberts, K., Absher, D. M., Mortazavi, A., Williams, B., Marinov, G., Trout, D., King, B., McCue, K., Kirilusha, A., DeSalvo, G., Fisher, K. A., Amrhein, H., Pepke, S., Vielmetter, J., Sherlock, G., Sidow, A., Batzoglou, S., Rauch, R., Kundaje, A., Libbrecht, M., Margulies, E. H., Parker, S. C. J., Elnitski, L., Green, E. D., Hubbard, T., Harrow, J., Searle, S., Kokocinski, F., Aken, B., Frankish, A., Hunt, T., Despacio-Reyes, G., Kay, M., Mukherjee, G., Bignell, A., Saunders, G., Boychenko, V., Brent, M., van Baren, M. J., Brown, R. H., Gerstein, M., Khurana, E., Balasubramanian, S., Lam, H., Cayting, P., Robilotto, R., Lu, Z., Derrien, T., Tanzer, A., Knowles, D. G., Mariotti, M., Haussler, D., Harte, R., Diekhans, M., Lin, M., Valencia, A., Tress, M., Landt, S. G., Raha, D., Shi, M., Euskirchen, G., Grubert, F., Kasowski, M., Lian, J., Lacroute, P., Xu, Y., Monahan, H., Patacsil, D., Slifer, T., Yang, X., Charos, A., Reed, B., Wu, L., Auerbach, R. K., Habegger, L., Hariharan, M., Rozowsky, J., Abyzov, A., Weissman, S. M., Struhl, K., Lamarre-Vincent, N., Lindahl-Allen, M., Miotto, B., Moqtaderi, Z., Fleming, J. D., Newburger, P., Farnham, P. J., Frietze, S., O'Geen, H., Xu, X., Blahnik, K. R., Cao, A. R., Iyengar, S., Kaul, R., Thurman, R. E., Wang, H., Navas, P. A., Sandstrom, R., Sabo, P. J., Weaver, M., Canfield, T., Lee, K., Neph, S., Roach, V., Reynolds, A., Johnson, A., Rynes, E., Giste, E., Vong, S., Neri, J., Frum, T., Nguyen, E. D., Ebersol, A. K., Sanchez, M. E., Sheffer, H. H., Lotakis, D., Haugen, E., Humbert, R., Kutyavin, T., Shafer, T., Noble, W. S., Dekker, J., Lajoie, B. R., Sanyal, A., Rosenbloom, K. R., Dreszer, T. R., Raney, B. J., Barber, G. P., Meyer, L. R., Sloan, C. A., Malladi, V. S., Cline, M. S., Learned, K., Swing, V. K., Zweig, A. S., Rhead, B., Fujita, P. A., Roskin, K., Karolchik, D., Kuhn, R. M., Wilder, S. P., Sobral, D., Herrero, J., Beal, K., Lukk, M., Brazma, A., Vaquerizas, J. M., Luscombe, N. M., Bickel, P. J., Boley, N., Brown, J. B., Li, Q., Huang, H., Sboner, A., Yip, K. Y., Cheng, C., Yan, K. K., Bhardwaj, N., Wang, J., Lochovsky, L., Jee, J., Gibson, T., Leng, J., Du, J., Harris, R. S., Song, G., Miller, W., Suh, B., Paten, B., Hoffman, M. M., Buske, O. J., Weng, Z., Dong, X., Wang, J., Xi, H., Tenenbaum, S. A., Doyle, F., Chittur, S., Penalva, L. O., Tullius, T. D., White, K. P., Karmakar, S., Victorsen, A., Jameel, N., Bild, N., Grossman, R. L., Collins, P. J., Trinklein, N. D., Giddings, M. C., Khatun, J., Maier, C., Wang, T., Whitfield, T. W., Chen, X., Yu, Y., Gunawardena, H., Feingold, E. A., Lowdon, R. F., Dillon, L. A. L., Good, P. J. & Risk, B., Apr 1 2011, In : PLoS biology. 9, 4, e1001046.

Research output: Contribution to journalArticle

Encyclopedias
Human Genome
Genes
DNA
genome
1 Citation (Scopus)

Autarky and material contingencies in Italian architectural debate (1936-1954)

Aviles Rincon, L., Dec 1 2009, In : Footprint. 4, p. 21-34 14 p.

Research output: Contribution to journalArticle

Economics
Iron
Steel
Autarky
Contingency
10 Citations (Scopus)
Thrombosis
Databases
Liver
Portal Vein
End Stage Liver Disease
37 Citations (Scopus)

Autologistic models for binary data on a lattice

Hughes, J., Haran, M. & Caragea, P. C., Nov 1 2011, In : Environmetrics. 22, 7, p. 857-871 15 p.

Research output: Contribution to journalArticle

Binary Data
Pseudo-likelihood
Spatial Dependence
Model
Perfect Sampling
5 Citations (Scopus)

Automated factor slice sampling

Tibbits, M. M., Groendyke, C., Haran, M. & Liechty, J. C., Jan 1 2014, In : Journal of Computational and Graphical Statistics. 23, 2, p. 543-563 21 p.

Research output: Contribution to journalArticle

Slice
Markov Chain Monte Carlo Algorithms
Parameter Tuning
Univariate
Tuning
10 Citations (Scopus)

Automatic Identification and Calibration of Stochastic Parameters in Inertial Sensors

Guerrier, S., Molinari, R. & Skaloud, J., Dec 1 2015, In : Navigation, Journal of the Institute of Navigation. 62, 4, p. 265-272 8 p.

Research output: Contribution to journalArticle

Calibration
Sensors
Random processes
MEMS
Time series
35 Citations (Scopus)

Automatic image semantic interpretation using social action and tagging data

Sawant, N., Li, J. & Wang, J., Jan 1 2011, In : Multimedia Tools and Applications. 51, 1, p. 213-246 34 p.

Research output: Contribution to journalArticle

Semantics
Electric fuses
Human computer interaction
Data mining
Labels
847 Citations (Scopus)
Statistical Modeling
Random processes
Linguistics
Indexing
Stochastic Processes
1 Citation (Scopus)

Automatic structure discovery for varying-coefficient partially linear models

Yang, G., Sun, Y. & Cui, X., Aug 3 2017, In : Communications in Statistics - Theory and Methods. 46, 15, p. 7703-7716 14 p.

Research output: Contribution to journalArticle

Partially Linear Model
Varying Coefficients
Covariates
Nonlinear Effects
Penalized Regression
1 Citation (Scopus)

Autoregressive Planet Search: Methodology

Caceres, G. A., Feigelson, E. D., Babu, G. J., Bahamonde, N., Christen, A., Bertin, K., Meza, C. & Curé, M., Jan 1 2019, In : Astronomical Journal. 158, 2, 57.

Research output: Contribution to journalArticle

transit
planets
planet
methodology
light curve
2 Citations (Scopus)

Autoregressive Planet Search: Feasibility Study for Irregular Time Series

Stuhr, A. M., Feigelson, E. D., Caceres, G. A. & Hartman, J. D., Jan 1 2019, In : Astronomical Journal. 158, 2, 59.

Research output: Contribution to journalArticle

feasibility study
planets
planet
time series
transit
2 Citations (Scopus)

Autoregressive Planet Search: Application to the Kepler Mission

Caceres, G. A., Feigelson, E. D., Babu, G. J., Bahamonde, N., Christen, A., Bertin, K., Meza, C. & Curé, M., Jan 1 2019, In : Astronomical Journal. 158, 2, 58.

Research output: Contribution to journalArticle

Kepler mission
planets
planet
transit
light curve
9 Citations (Scopus)

Autoregressive times series methods for time domain astronomy

Feigelson, E. D., Jogesh Babu, G. & Caceres, G. A., Aug 7 2018, In : Frontiers in Physics. 6, AUG, 80.

Research output: Contribution to journalArticle

Astronomy
Autoregressive Time Series
ARIMA
astronomy
Time Domain
8 Citations (Scopus)

A validated information criterion to determine the structural dimension in dimension reduction models

Ma, Y. & Zhang, X., Jan 1 2015, In : Biometrika. 102, 2, p. 409-420 12 p.

Research output: Contribution to journalArticle

Information Criterion
Dimension Reduction
Sufficient Dimension Reduction
Model
Model Evaluation
5 Citations (Scopus)

A varying threshold method for ChIP peak-calling using multiple sources of information

Chen, K. B. & Zhang, Y., Sep 4 2010, In : Bioinformatics. 26, 18, p. i504-i510 btq379.

Research output: Contribution to journalArticle

Chromatin Immunoprecipitation
Chromatin
Protein Binding
Proteins
Protein
38 Citations (Scopus)

Average effect of a mutation in lignin biosynthesis in loblolly pine

Wu, R., Remington, D. L., MacKay, J. J., McKeand, S. E. & O'Malley, D. M., Jan 1 1999, In : Theoretical and Applied Genetics. 99, 3-4, p. 705-710 6 p.

Research output: Contribution to journalArticle

Pinus taeda
Lignin
cinnamyl alcohol dehydrogenase
lignin
biosynthesis

Averaging almost-periodic functions and finite-dimensional unitary representations on free groups

Gorbis, A. & Tempelman, A., Oct 1 1988, In : Lithuanian Mathematical Journal. 28, 4, p. 332-335 4 p.

Research output: Contribution to journalArticle

Almost Periodic Functions
Unitary Representation
Free Group
Averaging
6 Citations (Scopus)

Averaging sequences and modulated ergodic theorems for weakly almost periodic group representations

Lin, M. & Tempelman, A., Jan 1 1999, In : Journal d'Analyse Mathematique. 77, p. 237-268 32 p.

Research output: Contribution to journalArticle

Periodic Group
Group Representation
Ergodic Theorem
Almost Periodic
Averaging
52 Citations (Scopus)

A weighted concordance correlation coefficient for repeated measurement designs

Chinchilli, V. M., Martel, J. K., Kumanyika, S. & Lloyd, T., Mar 1 1996, In : Biometrics. 52, 1, p. 341-353 13 p.

Research output: Contribution to journalArticle

Repeated Measurement Designs
Concordance
Correlation coefficient
Adipose Tissue
Eating
92 Citations (Scopus)

Azithromycin or montelukast as inhaled corticosteroid-sparing agents in moderate-to-severe childhood asthma study

Strunk, R. C., Bacharier, L. B., Phillips, B. R., Szefler, S. J., Zeiger, R. S., Chinchilli, V., Martinez, F. D., Lemanske, R. F., Taussig, L. M., Mauger, D., Morgan, W. J., Sorkness, C. A., Paul, I., Guilbert, T., Krawiec, M., Covar, R. & Larsen, G., Jan 1 2008, In : Journal of Allergy and Clinical Immunology. 122, 6

Research output: Contribution to journalArticle

montelukast
Azithromycin
Budesonide
Adrenal Cortex Hormones
Asthma

Bacterial genetic architecture of ecological interactions in co-culture by GWAS-taking Escherichia coli and Staphylococcus aureus as an example

He, X., Jin, Y., Ye, M., Chen, N., Zhu, J., Wang, J., Jiang, L. & Wu, R., Nov 27 2017, In : Frontiers in Microbiology. 8, NOV, 2332.

Research output: Contribution to journalArticle

Genome-Wide Association Study
Coculture Techniques
Single Nucleotide Polymorphism
Staphylococcus aureus
Escherichia coli
13 Citations (Scopus)

Balanced incomplete Latin square designs

Ai, M., Li, K., Liu, S. & Lin, D. K. J., Sep 1 2013, In : Journal of Statistical Planning and Inference. 143, 9, p. 1575-1582 8 p.

Research output: Contribution to journalArticle

Magic square
Orthogonal Latin Squares
Balanced Design
Relative Efficiency
Treatment Effects
43 Citations (Scopus)

Balancing Covariates via Propensity Score Weighting

Li, F., Morgan, K. L. & Zaslavsky, A. M., Jan 2 2018, In : Journal of the American Statistical Association. 113, 521, p. 390-400 11 p.

Research output: Contribution to journalArticle

Propensity Score
Balancing
Weighting
Covariates
Overlap
96 Citations (Scopus)

Bandwidth selection for kernel distribution function estimation

Altman, N. S. & Léger, C., Aug 1 1995, In : Journal of Statistical Planning and Inference. 46, 2, p. 195-214 20 p.

Research output: Contribution to journalArticle

Bandwidth Selection
Function Estimation
Kernel Function
Distribution functions
Distribution Function
47 Citations (Scopus)

Baseline serum NTx levels are prognostic in metastatic breast cancer patients with bone-only metastasis

Ali, S. M., Demers, L. M., Leitzel, K., Harvey, H. A., Clemens, D., Mallinak, N., Engle, L., Chinchilli, V., Costa, L., Brady, C., Seaman, J. & Lipton, A., Mar 1 2004, In : Annals of Oncology. 15, 3, p. 455-459 5 p.

Research output: Contribution to journalArticle

Breast Neoplasms
Neoplasm Metastasis
Bone and Bones
Serum
Survival

Baum-Welch algorithm on directed acyclic graph for mixtures with latent Bayesian networks

Li, J. & Lin, L., Jan 1 2017, In : Stat. 6, 1, p. 303-314 12 p.

Research output: Contribution to journalArticle

Directed Acyclic Graph
Bayesian Networks
Expectation Maximization
Expectation-maximization Algorithm
Exact Algorithms