Research Output

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Review article
2020

Sensitivity and specificity of information criteria

Dziak, J. J., Coffman, D. L., Lanza, S. T., Li, R. & Jermiin, L. S., Mar 23 2020, In : Briefings in bioinformatics. 21, 2, p. 553-565 13 p.

Research output: Contribution to journalReview article

1 Scopus citations

Systematic integration of GATA transcription factors and epigenomes via IDEAS paints the regulatory landscape of hematopoietic cells

Hardison, R. C., Zhang, Y., Keller, C. A., Xiang, G., Heuston, E. F., An, L., Lichtenberg, J., Giardine, B. M., Bodine, D., Mahony, S., Li, Q., Yue, F., Weiss, M. J., Blobel, G. A., Taylor, J., Hughes, J., Higgs, D. R. & Göttgens, B., Jan 1 2020, In : IUBMB Life. 72, 1, p. 27-38 12 p.

Research output: Contribution to journalReview article

Open Access
2019

Confronting models with data: The challenges of estimating disease spillover

Cross, P. C., Prosser, D. J., Ramey, A. M., Hanks, E. M. & Pepin, K. M., Sep 30 2019, In : Philosophical Transactions of the Royal Society B: Biological Sciences. 374, 1782, 20180435.

Research output: Contribution to journalReview article

3 Scopus citations

Stephen elliott fienberg 1942-2016, founding editor of the annual review of statistics and its application

Carriquiry, A. L., Reid, N. & Slavković, A. B., Mar 7 2019, In : Annual Review of Statistics and Its Application. 6, p. 1-18 18 p.

Research output: Contribution to journalReview article

Open Access
2018

A review of dynamic network models with latent variables

Kim, B., Lee, K. H., Xue, L. & Niu, X., Jan 1 2018, In : Statistics Surveys. 12, p. 105-135 31 p.

Research output: Contribution to journalReview article

15 Scopus citations

Bayesian Inference in the Presence of Intractable Normalizing Functions

Park, J. & Haran, M., Jul 3 2018, In : Journal of the American Statistical Association. 113, 523, p. 1372-1390 19 p.

Research output: Contribution to journalReview article

4 Scopus citations
2017

Kernel mean embedding of distributions: A review and beyond

Muandet, K., Fukumizu, K., Sriperumbudur, B. & Schölkopf, B., Jan 1 2017, In : Foundations and Trends in Machine Learning. 10, 1-2, p. 1-141 141 p.

Research output: Contribution to journalReview article

57 Scopus citations
1 Scopus citations
2016

Editorial

Li, R., Oct 2016, In : Annals of Statistics. 44, 5, p. 1817-1820 4 p.

Research output: Contribution to journalReview article

Kernel mean shrinkage estimators

Muandet, K., Sriperumbudur, B., Fukumizu, K., Gretton, A. & Schölkopf, B., Apr 1 2016, In : Journal of Machine Learning Research. 17

Research output: Contribution to journalReview article

12 Scopus citations
2015

A selective overview of feature screening for ultrahigh-dimensional data

Liu, J. Y., Zhong, W. & Li, R. Z., Oct 29 2015, In : Science China Mathematics. 58, 10

Research output: Contribution to journalReview article

21 Scopus citations

Computational predictions of the site of metabolism of cytochrome P450 2D6 substrates: Comparative analysis, molecular docking, bioactivation and toxicological implications

Ford, K. A., Ryslik, G., Sodhi, J., Halladay, J., Diaz, D., Dambach, D. & Masuda, M., Jul 3 2015, In : Drug Metabolism Reviews. 47, 3, p. 291-319 29 p.

Research output: Contribution to journalReview article

6 Scopus citations

Multi-scale biological and physical modelling of the tumour micro-environment

Kunz, R. F., Gaskin, B. J., Li, Q., Davanloo-Tajbakhsh, S. & Dong, C., Feb 2 2015, In : Drug Discovery Today: Disease Models. 16, p. 7-15 9 p.

Research output: Contribution to journalReview article

1 Scopus citations
2014

Improvements in prevalence trend fitting and incidence estimation in EPP 2013

Brown, T., Bao, L., Eaton, J. W., Hogan, D. R., Mahy, M., Marsh, K., Mathers, B. M. & Puckett, R., Nov 11 2014, In : AIDS. 28, p. S415-S425

Research output: Contribution to journalReview article

30 Scopus citations

Incorporating incidence information within the UNAIDS estimation and projection package framework: A study based on simulated incidence assay data

Bao, L., Ye, J. & Hallett, T. B., Nov 11 2014, In : AIDS. 28, p. S515-S522

Research output: Contribution to journalReview article

8 Scopus citations
2013

Conditional inference given partial information in contingency tables using Markov bases

Karwa, V. & Slavkovic, A. B., May 1 2013, In : Wiley Interdisciplinary Reviews: Computational Statistics. 5, 3, p. 207-218 12 p.

Research output: Contribution to journalReview article

4 Scopus citations

Selection of multinomial logit models via association rules analysis

Changpetch, P. & Lin, D. K. J., Jan 1 2013, In : Wiley Interdisciplinary Reviews: Computational Statistics. 5, 1, p. 68-77 10 p.

Research output: Contribution to journalReview article

10 Scopus citations

Variation in the transcriptional response of threatened coral larvae to elevated temperatures

Polato, N. R., Altman, N. S. & Baums, I. B., Mar 1 2013, In : Molecular ecology. 22, 5, p. 1366-1382 17 p.

Research output: Contribution to journalReview article

29 Scopus citations
2012

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

Landt, S. G., Marinov, G. K., Kundaje, A., Kheradpour, P., Pauli, F., Batzoglou, S., Bernstein, B. E., Bickel, P., Brown, J. B., Cayting, P., Chen, Y., DeSalvo, G., Epstein, C., Fisher-Aylor, K. I., Euskirchen, G., Gerstein, M., Gertz, J., Hartemink, A. J., Hoffman, M. M., Iyer, V. R. & 27 others, Jung, Y. L., Karmakar, S., Kellis, M., Kharchenko, P. V., Li, Q., Liu, T., Liu, X. S., Ma, L., Milosavljevic, A., Myers, R. M., Park, P. J., Pazin, M. J., Perry, M. D., Raha, D., Reddy, T. E., Rozowsky, J., Shoresh, N., Sidow, A., Slattery, M., Stamatoyannopoulos, J. A., Tolstorukov, M. Y., White, K. P., Xi, S., Farnham, P. J., Lieb, J. D., Wold, B. J. & Snyder, M., Sep 1 2012, In : Genome research. 22, 9, p. 1813-1831 19 p.

Research output: Contribution to journalReview article

793 Scopus citations

Piecing together the past: Statistical insights into paleoclimatic reconstructions

Tingley, M. P., Craigmile, P. F., Haran, M., Li, B., Mannshardt, E. & Rajaratnam, B., Mar 5 2012, In : Quaternary Science Reviews. 35, p. 1-22 22 p.

Research output: Contribution to journalReview article

107 Scopus citations

Private forest landowners: Estimating population parameters

Metcalf, A. L., Finley, J. C., Luloff, A. E., Shumway, D. & Stedman, R. C., Oct 1 2012, In : Journal of Forestry. 110, 7, p. 362-370 9 p.

Research output: Contribution to journalReview article

5 Scopus citations
2011

A note on small composite designs for sequential experimentation

Nguyen, N. K. & Lin, D. K. J., Mar 1 2011, In : Journal of Statistical Theory and Practice. 5, 1, p. 109-117 9 p.

Research output: Contribution to journalReview article

11 Scopus citations
2008

Modes of inference for evaluating the confidence of peptide identifications

Fitzgibbon, M., Li, Q. & McIntosh, M., Jan 1 2008, In : Journal of Proteome Research. 7, 1, p. 34-39 6 p.

Research output: Contribution to journalReview article

30 Scopus citations

Rejoinder: One-step sparse estimates in nonconcave penalized likelihood models

Zou, H. & Li, R., Aug 1 2008, In : Annals of Statistics. 36, 4, p. 1561-1566 6 p.

Research output: Contribution to journalReview article

17 Scopus citations
2007

Parametric and nonparametric models and methods in financial econometrics

Zhao, Z., Dec 1 2007, In : Statistics Surveys. 1, p. 1-42 42 p.

Research output: Contribution to journalReview article

1 Scopus citations

The floral genome: an evolutionary history of gene duplication and shifting patterns of gene expression

Soltis, D. E., Ma, H., Frohlich, M. W., Soltis, P. S., Albert, V. A., Oppenheimer, D. G., Altman, N. S., dePamphilis, C. & Leebens-Mack, J., Aug 1 2007, In : Trends in Plant Science. 12, 8, p. 358-367 10 p.

Research output: Contribution to journalReview article

74 Scopus citations
2006

Inference in curved exponential family models for networks

Hunter, D. R. & Handcock, M. S., Sep 1 2006, In : Journal of Computational and Graphical Statistics. 15, 3, p. 565-583 19 p.

Research output: Contribution to journalReview article

246 Scopus citations
2005

Locally efficient semiparametric estimators for generalized skew-elliptical distributions

Ma, Y., Genton, M. G. & Tsiatis, A. A., Sep 1 2005, In : Journal of the American Statistical Association. 100, 471, p. 980-989 10 p.

Research output: Contribution to journalReview article

28 Scopus citations

Preserving the confidentiality of categorical statistical data bases when releasing information for association rules

Fienberg, S. E. & Slavkovic, A. B., Sep 1 2005, In : Data Mining and Knowledge Discovery. 11, 2, p. 155-180 26 p.

Research output: Contribution to journalReview article

27 Scopus citations

Response: Remain steadfast with the St. Petersburg Paradox to quantify irrational exuberance

Székely, G. J. & Richards, D. S. P., Aug 1 2005, In : American Statistician. 59, 3, p. 235-239 5 p.

Research output: Contribution to journalReview article

2 Scopus citations

Teaching computing in statistical theory courses

Hunter, D. R., Nov 1 2005, In : American Statistician. 59, 4, p. 327-333 7 p.

Research output: Contribution to journalReview article

2004

Multiresponse systems optimization using a goal attainment approach

Xu, K., Lin, D. K. J., Tang, L. C. & Xie, M., May 1 2004, In : IIE Transactions (Institute of Industrial Engineers). 36, 5, p. 433-445 13 p.

Research output: Contribution to journalReview article

51 Scopus citations

Random walks as motivational material in introductory statistics and probability courses

Fisher, L. A. & Richards, D., Nov 1 2004, In : American Statistician. 58, 4, p. 310-316 7 p.

Research output: Contribution to journalReview article

1 Scopus citations

Some statistical and computational challenges, and opportunities in astronomy

Babu, G. J. & Djorgovski, S. G., May 1 2004, In : Statistical Science. 19, 2, p. 322-332 11 p.

Research output: Contribution to journalReview article

2 Scopus citations

The St. Petersburg paradox and the crash of high-tech stocks in 2000

Székely, G. J. & Richards, D. S. P., Aug 1 2004, In : American Statistician. 58, 3, p. 225-231 7 p.

Research output: Contribution to journalReview article

12 Scopus citations
2003

Accelerating computation in Markov random field models for spatial data via structured MCMC

Haran, M., Hodges, J. S. & Carlin, B. P., Jun 1 2003, In : Journal of Computational and Graphical Statistics. 12, 2, p. 249-264 16 p.

Research output: Contribution to journalReview article

10 Scopus citations

On sets of time and space averages for continuous functions on a configuration space

Gurevich, B. M. & Tempel'man, A. A., Mar 1 2003, In : Russian Mathematical Surveys. 58, 2, p. 370-371 2 p.

Research output: Contribution to journalReview article

2 Scopus citations
2002

Sufficient dimension reduction and graphics in regression

Chiaromonte, F. & Cook, R. D., Dec 1 2002, In : Annals of the Institute of Statistical Mathematics. 54, 4, p. 768-795 28 p.

Research output: Contribution to journalReview article

23 Scopus citations
2001

Defining and unraveling biocomplexity

Michener, W. K., Baerwald, T. J., Firth, P., Palmer, M. A., Rosenberger, J. L., Sandlin, E. A. & Zimmerman, H., Jan 1 2001, In : BioScience. 51, 12, p. 1018-1023 6 p.

Research output: Contribution to journalReview article

134 Scopus citations

The history of the Dirichlet and Liouville distributions

Gupta, R. D. & Richards, D. S. P., Dec 2001, In : International Statistical Review. 69, 3, p. 433-446 14 p.

Research output: Contribution to journalReview article

25 Scopus citations
1999

Semantics-sensitive retrieval for digital picture libraries

Wang, J. Z., Chan, D., Li, J. & Wiederhold, G., Nov 1 1999, In : D-Lib Magazine. 5, 11, p. 60-72 13 p.

Research output: Contribution to journalReview article

18 Scopus citations
1998

A graphical comparison of supersaturated designs

Balkin, S. D. & Lin, D. K. J., Jan 1 1998, In : Communications in Statistics - Theory and Methods. 27, 6, p. 1289-1303 15 p.

Research output: Contribution to journalReview article

6 Scopus citations
1997

20 Statistical analysis with incomplete data: A selective review

Akritas, M. G. & LaValley, M. P., Dec 1 1997, In : Handbook of Statistics. 15, p. 551-632 82 p.

Research output: Contribution to journalReview article

7 Scopus citations

Robust analysis of within-unit variances in repeated measurement experiments

Padmanabhan, A. R., Chinchilli, V. M. & Babu, G. J., Dec 1 1997, In : Biometrics. 53, 4, p. 1520-1526 7 p.

Research output: Contribution to journalReview article

1 Scopus citations
1996

11 Response surface designs

Draper, N. R. & Lin, D. K. J., Dec 1 1996, In : Handbook of Statistics. 13, p. 343-375 33 p.

Research output: Contribution to journalReview article

27 Scopus citations
1994

7 Statistical analysis of censored environmental data

Akritas, M. G., Ruscitti, T. F. & Patil, G. P., Dec 1 1994, In : Handbook of Statistics. 12, p. 221-242 22 p.

Research output: Contribution to journalReview article

13 Scopus citations
1993

19 Bootstrap methodology

Babu, G. J. & Radhakrishna Rao, C., Dec 1 1993, In : Handbook of Statistics. 9, p. 627-659 33 p.

Research output: Contribution to journalReview article

15 Scopus citations
1991

Tests of independence for bivariate data with random censoring: A contingency-table approach

Akritas, M. G. & Clogg, C. C., Jan 1 1991, In : Biometrics. 47, 4, p. 1339-1354 16 p.

Research output: Contribution to journalReview article

1 Scopus citations
1988

20 Data-based sampling and model-based estimation for environmental resources

Patil, G. P., Babu, G. J., Hennemuth, R. C., Myers, W. L., Rajarshi, M. B. & Taillie, C., Dec 1 1988, In : Handbook of Statistics. 6, p. 489-513 25 p.

Research output: Contribution to journalReview article

1 Scopus citations