Research Output 1973 2020

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Review article
2011
1122 Citations (Scopus)

SDSS-III: Massive spectroscopic surveys of the distant Universe, the MILKY WAY, and extra-solar planetary systems

Eisenstein, D. J., Weinberg, D. H., Agol, E., Aihara, H., Allende Prieto, C., Anderson, S. F., Arns, J. A., Aubourg, E., Bailey, S., Balbinot, E., Barkhouser, R., Beers, T. C., Berlind, A. A., Bickerton, S. J., Bizyaev, D., Blanton, M. R., Bochanski, J. J., Bolton, A. S., Bosman, C. T., Bovy, J. & 224 others, Brandt, W. N., Breslauer, B., Brewington, H. J., Brinkmann, J., Brown, P. J., Brownstein, J. R., Burger, D., Busca, N. G., Campbell, H., Cargile, P. A., Carithers, W. C., Carlberg, J. K., Carr, M. A., Chang, L., Chen, Y., Chiappini, C., Comparat, J., Connolly, N., Cortes, M., Croft, R. A. C., Cunha, K., Da Costa, L. N., Davenport, J. R. A., Dawson, K., De Lee, N., Porto De Mello, G. F., De Simoni, F., Dean, J., Dhital, S., Ealet, A., Ebelke, G. L., Edmondson, E. M., Eiting, J. M., Escoffier, S., Esposito, M., Evans, M. L., Fan, X., Femenía Castell, B., Dutra Ferreira, L., Fitzgerald, G., Fleming, S. W., Font-Ribera, A., Ford, E. B., Frinchaboy, P. M., García Pérez, A. E., Gaudi, B. S., Ge, J., Ghezzi, L., Gillespie, B. A., Gilmore, G., Girardi, L., Gott, J. R., Gould, A., Grebel, E. K., Gunn, J. E., Hamilton, J. C., Harding, P., Harris, D. W., Hawley, S. L., Hearty, F. R., Hennawi, J. F., Gonzlez Hernndez, J. I., Ho, S., Hogg, D. W., Holtzman, J. A., Honscheid, K., Inada, N., Ivans, I. I., Jiang, L., Jiang, P., Johnson, J. A., Jordan, C., Jordan, W. P., Kauffmann, G., Kazin, E., Kirkby, D., Klaene, M. A., Knapp, G. R., Kneib, J. P., Kochanek, C. S., Koesterke, L., Kollmeier, J. A., Kron, R. G., Lampeitl, H., Lang, D., Lawler, J. E., Le Goff, J. M., Lee, B. L., Lee, Y. S., Leisenring, J. M., Lin, Y. T., Liu, J., Long, D. C., Loomis, C. P., Lucatello, S., Lundgren, B., Lupton, R. H., Ma, B., Ma, Z., MacDonald, N., MacK, C., Mahadevan, S., Maia, M. A. G., Majewski, S. R., Makler, M., Malanushenko, E., Malanushenko, V., Mandelbaum, R., Maraston, C., Margala, D., Maseman, P., Masters, K. L., McBride, C. K., McDonald, P., McGreer, I. D., McMahon, R. G., Mena Requejo, O., Ménard, B., Miralda-Escudé, J., Morrison, H. L., Mullally, F., Muna, D., Murayama, H., Myers, A. D., Naugle, T., Neto, A. F., Nguyen, D. C., Nichol, R. C., Nidever, D. L., O'Connell, R. W., Ogando, R. L. C., Olmstead, M. D., Oravetz, D. J., Padmanabhan, N., Paegert, M., Palanque-Delabrouille, N., Pan, K., Pandey, P., Parejko, J. K., Pâris, I., Pellegrini, P., Pepper, J., Percival, W. J., Petitjean, P., Pfaffenberger, R., Pforr, J., Phleps, S., Pichon, C., Pieri, M. M., Prada, F., Price-Whelan, A. M., Raddick, M. J., Ramos, B. H. F., Reid, I. N., Reyle, C., Rich, J., Richards, G. T., Rieke, G. H., Rieke, M. J., Rix, H. W., Robin, A. C., Rocha-Pinto, H. J., Rockosi, C. M., Roe, N. A., Rollinde, E., Ross, A. J., Ross, N. P., Rossetto, B., Snchez, A. G., Santiago, B., Sayres, C., Schiavon, R., Schlegel, D. J., Schlesinger, K. J., Schmidt, S. J., Schneider, D. P., Sellgren, K., Shelden, A., Sheldon, E., Shetrone, M., Shu, Y., Silverman, J. D., Simmerer, J., Simmons, A. E., Sivarani, T., Skrutskie, M. F., Slosar, A., Smee, S., Smith, V. V., Snedden, S. A., Stassun, K. G., Steele, O., Steinmetz, M., Stockett, M. H., Stollberg, T., Strauss, M. A., Szalay, A. S., Tanaka, M., Thakar, A. R., Thomas, D., Tinker, J. L., Tofflemire, B. M., Tojeiro, R., Tremonti, C. A., Vargas Magãa, M., Verde, L., Vogt, N. P., Wake, D. A., Wan, X., Wang, J., Weaver, B. A., White, M., White, S. D. M., Wilson, J. C., Wisniewski, J. P., Wood-Vasey, W. M., Yanny, B., Yasuda, N., Yèche, C., York, D. G., Young, E., Zasowski, G., Zehavi, I. & Zhao, B., Jan 1 2011, In : Astronomical Journal. 142, 3, 72.

Research output: Contribution to journalReview article

planetary systems
universe
stars
radial velocity
planets
2010
11 Citations (Scopus)

Designs for linkage analysis and association studies of complex diseases.

Cui, Y., Li, G., Li, S. & Wu, R., Nov 9 2010, In : Methods in molecular biology (Clifton, N.J.). 620, p. 219-242 24 p.

Research output: Contribution to journalReview article

Genomics
Genomic Imprinting
Gene Expression
Genetic Linkage
Chromosome Mapping
30 Citations (Scopus)

Mapping genes for plant structure, development and evolution: functional mapping meets ontology

He, Q., Berg, A., Li, Y., Vallejos, C. E. & Wu, R., Jan 1 2010, In : Trends in Genetics. 26, 1, p. 39-46 8 p.

Research output: Contribution to journalReview article

Plant Structures
Plant Development
Chromosome Mapping
Quantitative Trait Loci
Internal-External Control
20 Citations (Scopus)

X-ray insights into star and planet formation

Feigelson, E., Apr 20 2010, In : Proceedings of the National Academy of Sciences of the United States of America. 107, 16, p. 7153-7157 5 p.

Research output: Contribution to journalReview article

Planets
X-Rays
Meteoroids
United States National Aeronautics and Space Administration
Physics
2009
4 Citations (Scopus)

Computing genetic imprinting expressed by haplotypes.

Cheng, Y., Berg, A., Wu, S., Li, Y. & Wu, R., Jan 1 2009, In : Methods in molecular biology (Clifton, N.J.). 573, p. 189-212 24 p.

Research output: Contribution to journalReview article

Genomic Imprinting
Haplotypes
Genome
Genes
Gene Regulatory Networks
11 Citations (Scopus)

Genetic dissection of complex endosperm traits

Wang, X., Xu, C., Wu, R. & Larkins, B. A., Jul 1 2009, In : Trends in Plant Science. 14, 7, p. 391-398 8 p.

Research output: Contribution to journalReview article

endosperm
epigenetics
genetic techniques and protocols
raw materials
quantitative trait loci
3 Citations (Scopus)

Network models for dissecting plant development by functional mapping

Wu, S., Yap, J. S., Li, Y., Li, Q., Fu, G., Li, J., Das, K., Berg, A., Zeng, Y. & Wu, R., Sep 1 2009, In : Current Bioinformatics. 4, 3, p. 183-187 5 p.

Research output: Contribution to journalReview article

Plant Development
Network Model
Growth and Development
Proteins
Biological Phenomena
4 Citations (Scopus)

Penn state hershey - Center for pediatric cardiovascular research: Guest editorial

Undar, A., Pauliks, L., Clark, J. B., Zahn, J., Rosenberg, G., Kunselman, A., Sun, Q., Pekkan, K., Saliba, K., Carney, E., Thomas, N., Freeman, W., Vrana, K., El-Banayosy, A., Ural, S., Wilson, R., Umstead, T. M., Floros, J., Phelps, D., Weiss, W. & 15 others, Snyder, A., Yang, S., Kimatian, S., Cyran, S., Chinchilli, V., Guan, Y., Rider, A., Haines, N., Rogerson, A., Alkan-Bozkaya, T., Akcevin, A., Sun, K., Wang, S., Cun, L. & Myers, J., Nov 1 2009, In : Artificial organs. 33, 11, p. 883-887 5 p.

Research output: Contribution to journalReview article

Pediatrics
Research
Perfusion
Students
National Heart, Lung, and Blood Institute (U.S.)
2008
2 Citations (Scopus)

Modeling the genetic control of HIV-1 dynamics after highly active antiretroviral therapy

Ma, C. X., Li, Y. & Wu, R., May 1 2008, In : Current Genomics. 9, 3, p. 208-211 4 p.

Research output: Contribution to journalReview article

Highly Active Antiretroviral Therapy
HIV-1
HIV
Drug Design
Statistical Models
30 Citations (Scopus)

Modes of inference for evaluating the confidence of peptide identifications

Fitzgibbon, M., Li, Q. & McIntosh, M., Jan 1 2008, In : Journal of Proteome Research. 7, 1, p. 34-39 6 p.

Research output: Contribution to journalReview article

Databases
Peptides
Search Engine
Manuscripts
Search engines
15 Citations (Scopus)

Rejoinder: One-step sparse estimates in nonconcave penalized likelihood models

Zou, H. & Li, R., Aug 1 2008, In : Annals of Statistics. 36, 4, p. 1561-1566 6 p.

Research output: Contribution to journalReview article

Penalized Likelihood
Estimate
Model
2007
8 Citations (Scopus)

A general quantitative genetic model for haplotyping a complex trait in humans

Wu, S., Yang, J., Wang, C. & Wu, R., Aug 1 2007, In : Current Genomics. 8, 5, p. 343-350 8 p.

Research output: Contribution to journalReview article

Genetic Models
Haplotypes
Single Nucleotide Polymorphism
Diploidy
Uncertainty
14 Citations (Scopus)
Meta-Analysis
Asthma
Publication Bias
Causality
Placebos
37 Citations (Scopus)
National Heart, Lung, and Blood Institute (U.S.)
Asthma
Clinical Trials
Guidelines
Research
8 Citations (Scopus)

Mapping nucleotide sequences that encode complex binary disease traits with HapMap

Cui, Y., Fu, W., Sun, K., Romero, R. & Wu, R., Aug 1 2007, In : Current Genomics. 8, 5, p. 307-322 16 p.

Research output: Contribution to journalReview article

HapMap Project
Genetic Association Studies
Single Nucleotide Polymorphism
Human Genome
Computer Simulation
1 Citation (Scopus)

Parametric and nonparametric models and methods in financial econometrics

Zhao, Z., Dec 1 2007, In : Statistics Surveys. 1, p. 1-42 42 p.

Research output: Contribution to journalReview article

Nonparametric Methods
Nonparametric Model
Parametric Model
Econometrics
Model Validation
72 Citations (Scopus)

The floral genome: an evolutionary history of gene duplication and shifting patterns of gene expression

Soltis, D. E., Ma, H., Frohlich, M. W., Soltis, P. S., Albert, V. A., Oppenheimer, D. G., Altman, N. S., Depamphilis, C. W. & Leebens-Mack, J., Aug 1 2007, In : Trends in Plant Science. 12, 8, p. 358-367 10 p.

Research output: Contribution to journalReview article

gene duplication
Angiospermae
gene expression
genome
genes
216 Citations (Scopus)

The XMM-Newton extended survey of the Taurus molecular cloud (XEST)

Güdel, M., Briggs, K. R., Arzner, K., Audard, M., Bouvier, J., Feigelson, E., Franciosini, E., Glauser, A., Grosso, N., Micela, G., Monin, J. L., Montmerle, T., Padgett, D. L., Palla, F., Pillitteri, I., Rebull, L., Scelsi, L., Silva, B., Skinner, S. L., Stelzer, B. & 1 others, Telleschi, A., Jun 1 2007, In : Astronomy and Astrophysics. 468, 2, p. 353-377 25 p.

Research output: Contribution to journalReview article

XMM-Newton telescope
molecular clouds
newton
x rays
X-ray spectroscopy
2006
13 Citations (Scopus)

Clustering periodic patterns of gene expression based on fourier approximations

Kim, B. R., Littell, R. C. & Wu, R., May 1 2006, In : Current Genomics. 7, 3, p. 197-203 7 p.

Research output: Contribution to journalReview article

Cluster Analysis
Gene Expression
Technology
cdc Genes
Periodicity
8 Citations (Scopus)

Detecting sequence-sequence interactions for complex diseases

Lin, M. & Wu, R., Mar 1 2006, In : Current Genomics. 7, 1, p. 59-72 14 p.

Research output: Contribution to journalReview article

HapMap Project
Haplotypes
Nucleotides
Quantitative Trait Loci
Single Nucleotide Polymorphism
1 Citation (Scopus)

Epistatic control of human obesity as revealed by linkage disequilibrium mapping: A report from the NHLBI-sponsored WISE study

Li, H., Wu, R., Lin, M., Terra, S. G., Pepine, C. J., McGorray, S. P., Johnson, B. D. & Johnson, J. A., Nov 1 2006, In : Current Genomics. 7, 7, p. 463-468 6 p.

Research output: Contribution to journalReview article

National Heart, Lung, and Blood Institute (U.S.)
Chromosome Mapping
Linkage Disequilibrium
Ischemia
Obesity
224 Citations (Scopus)

Inference in curved exponential family models for networks

Hunter, D. R. & Handcock, M. S., Sep 1 2006, In : Journal of Computational and Graphical Statistics. 15, 3, p. 565-583 19 p.

Research output: Contribution to journalReview article

Curved Exponential Family
Graph Model
Random Graphs
Maximum Likelihood Estimation
Methodology
221 Citations (Scopus)

Opinion: Functional mapping - How to map and study the genetic architecture of dynamic complex traits

Wu, R. & Lin, M., Mar 1 2006, In : Nature Reviews Genetics. 7, 3, p. 229-237 9 p.

Research output: Contribution to journalReview article

Quantitative Trait Loci
Nucleotides
Gene Regulatory Networks
Genes
2005
27 Citations (Scopus)

Locally efficient semiparametric estimators for generalized skew-elliptical distributions

Ma, Y., Genton, M. G. & Tsiatis, A. A., Sep 1 2005, In : Journal of the American Statistical Association. 100, 471, p. 980-989 10 p.

Research output: Contribution to journalReview article

Elliptical Distribution
Skew
Estimator
Semiparametric Efficiency
Skew-normal Distribution
27 Citations (Scopus)

Preserving the confidentiality of categorical statistical data bases when releasing information for association rules

Fienberg, S. E. & Slavkovic, A. B., Sep 1 2005, In : Data Mining and Knowledge Discovery. 11, 2, p. 155-180 26 p.

Research output: Contribution to journalReview article

Association rules
2 Citations (Scopus)

Response: Remain steadfast with the St. Petersburg Paradox to quantify irrational exuberance

Székely, G. J. & Richards, D., Aug 1 2005, In : American Statistician. 59, 3, p. 235-239 5 p.

Research output: Contribution to journalReview article

Paradox
Quantify
St. Petersburg paradox

Teaching computing in statistical theory courses

Hunter, D. R., Nov 1 2005, In : American Statistician. 59, 4, p. 327-333 7 p.

Research output: Contribution to journalReview article

Statistical Computing
Exercise
Large Sample Theory
Computing
Statistics
2004
23 Citations (Scopus)

Head Injury and Pulmonary Embolism: A Retrospective Report Based on the Pennsylvania Trauma Outcomes Study

Page, R. B., Spott, M. A., Krishnamurthy, S., Taleghani, C., Chinchilli, V., Kelly, D. F., Chandler, W. F., Marion, D. W. & Wilberger, J. E., Jan 1 2004, In : Neurosurgery. 54, 1, p. 143-149 7 p.

Research output: Contribution to journalReview article

Pulmonary Embolism
Craniocerebral Trauma
Outcome Assessment (Health Care)
Wounds and Injuries
Incidence
49 Citations (Scopus)

Multiresponse systems optimization using a goal attainment approach

Xu, K., Lin, D. K. J., Tang, L. C. & Xie, M., May 1 2004, In : IIE Transactions (Institute of Industrial Engineers). 36, 5, p. 433-445 13 p.

Research output: Contribution to journalReview article

Quadratic programming
Nonlinear programming
Decision maker
Predictive ability
Optimization problem
1 Citation (Scopus)

Random walks as motivational material in introductory statistics and probability courses

Fisher, L. A. & Richards, D., Nov 1 2004, In : American Statistician. 58, 4, p. 310-316 7 p.

Research output: Contribution to journalReview article

Random walk
Statistics
Geometric distribution
Infinite series
Facet
2 Citations (Scopus)

Some statistical and computational challenges, and opportunities in astronomy

Babu, G. J. & Djorgovski, S. G., May 1 2004, In : Statistical Science. 19, 2, p. 322-332 11 p.

Research output: Contribution to journalReview article

Astronomy
Observatory
Quasars
Data Complexity
Galaxies
43 Citations (Scopus)

The Chandra Deep Field-North survey. XVII. Evolution of magnetic activity in old late-type stars

Feigelson, E., Hornschemeier, A. E., Micela, G., Bauer, F. E., Alexander, D. M., Brandt, W. N., Favata, F., Sciortino, S. & Garmire, G. P., Aug 20 2004, In : Astrophysical Journal. 611, 2 I, p. 1107-1120 14 p.

Research output: Contribution to journalReview article

stars
x rays
luminosity
erg
intervals
12 Citations (Scopus)

The St. Petersburg paradox and the crash of high-tech stocks in 2000

Székely, G. J. & Richards, D., Aug 1 2004, In : American Statistician. 58, 3, p. 225-231 7 p.

Research output: Contribution to journalReview article

Crash
Paradox
Stock Prices
Valuation
Game
2003
10 Citations (Scopus)

Accelerating computation in Markov random field models for spatial data via structured MCMC

Haran, M., Hodges, J. S. & Carlin, B. P., Jun 1 2003, In : Journal of Computational and Graphical Statistics. 12, 2, p. 249-264 16 p.

Research output: Contribution to journalReview article

Spatial Data
Markov Chain Monte Carlo
Random Field
Markov Chain Monte Carlo Algorithms
Spatial Model
24 Citations (Scopus)

Molecular Dissection of Allometry, Ontogeny, and Plasticity: A Genomic View of Developmental Biology

Wu, R., Ma, C. X., Lou, X. Y. & Casella, G., Jan 1 2003, In : BioScience. 53, 11, p. 1041-1047 7 p.

Research output: Contribution to journalReview article

Developmental Biology
allometry
ontogeny
Dissection
genomics
2 Citations (Scopus)

On sets of time and space averages for continuous functions on a configuration space

Gurevich, B. M. & Tempelman, A., Mar 1 2003, In : Russian Mathematical Surveys. 58, 2, p. 370-371 2 p.

Research output: Contribution to journalReview article

Configuration Space
Continuous Function
13 Citations (Scopus)

Planet-Finding Prospects for the Space Interferometry Mission

Ford, E. B. & Tremaine, S., Oct 1 2003, In : Publications of the Astronomical Society of the Pacific. 115, 812, p. 1171-1186 16 p.

Research output: Contribution to journalReview article

interferometry
planets
planet
radial velocity
orbits
27 Citations (Scopus)

Quantitative trait loci of growth trajectories in Populus

Wu, R., Ma, C. X., Yang, M. C. K., Chang, M., Littell, R. C., Santra, U., Wu, S. S., Yin, T., Huang, M., Wang, M. & Casella, G., Feb 2003, In : Genetical Research. 81, 1, p. 51-64 14 p.

Research output: Contribution to journalReview article

Populus
Quantitative Trait Loci
Growth
Biological Phenomena
Genetic Linkage
2002
13 Citations (Scopus)

A unified framework for mapping quantitative trait loci in bivalent tetraoploids using single-dose restriction fragments: A case study from alfalfa

Ma, C. X., Casella, G., Shen, Z. J., Osborn, T. C. & Wu, R., Dec 1 2002, In : Genome research. 12, 12, p. 1974-1981 8 p.

Research output: Contribution to journalReview article

Medicago sativa
Quantitative Trait Loci
Chromosome Pairing
Polyploidy
Meiosis
23 Citations (Scopus)

Sufficient dimension reduction and graphics in regression

Chiaromonte, F. & Cook, R. D., Dec 1 2002, In : Annals of the Institute of Statistical Mathematics. 54, 4, p. 768-795 28 p.

Research output: Contribution to journalReview article

Sufficient Dimension Reduction
Dimension-reduction Subspaces
Regression
Central Subspace
Display
2001
131 Citations (Scopus)

Defining and unraveling biocomplexity

Michener, W. K., Baerwald, T. J., Firth, P., Palmer, M. A., Rosenberger, J. L., Sandlin, E. A. & Zimmerman, H., Jan 1 2001, In : BioScience. 51, 12, p. 1018-1023 6 p.

Research output: Contribution to journalReview article

31 Citations (Scopus)

Phenotypic plasticity of sylleptic branching: Genetic design of tree architecture

Wu, R. & Hinckley, T. M., Jan 1 2001, In : Critical Reviews in Plant Sciences. 20, 5, p. 467-485 19 p.

Research output: Contribution to journalReview article

phenotypic plasticity
branching
buds
growth habit
temperate zones
24 Citations (Scopus)

The history of the Dirichlet and Liouville distributions

Gupta, R. D. & Richards, D., Jan 1 2001, In : International Statistical Review. 69, 3, p. 433-446 14 p.

Research output: Contribution to journalReview article

Dirichlet
Dirichlet Distribution
Statistics
Integral Formula
History
7 Citations (Scopus)

The Organization of the Asthma Clinical Research Network: A multicenter, multiprotocol clinical trials team

Kephart, D., Chinchilli, V., Hurd, S. S. & Cherniack, R. M., Jan 1 2001, In : Controlled Clinical Trials. 22, 6 SUPPL. 1, p. S119-S125

Research output: Contribution to journalReview article

Asthma
Clinical Trials
Organizations
Research
Mortality
2000
1 Citation (Scopus)

33 Methods of establishing in vitro-in vivo relationships for modified release drug products

Mauger, D. & Chinchilli, V., Dec 1 2000, In : Handbook of Statistics. 18, p. 977-1002 26 p.

Research output: Contribution to journalReview article

Drug products
Drugs
Relationships
9 Citations (Scopus)

Molecular genetics and developmental physiology: Implications for designing better forest crops

Wu, R., Hu, X. & Han, Y., Jan 1 2000, In : Critical Reviews in Plant Sciences. 19, 5, p. 377-393 17 p.

Research output: Contribution to journalReview article

molecular genetics
chromosome mapping
physiology
breeding
crops
1999
18 Citations (Scopus)

Semantics-sensitive retrieval for digital picture libraries

Wang, J., Chan, D., Li, J. & Wiederhold, G., Nov 1 1999, In : D-Lib Magazine. 5, 11, p. 60-72 13 p.

Research output: Contribution to journalReview article

semantics
segmentation
1998
6 Citations (Scopus)

A graphical comparison of supersaturated designs

Balkin, S. D. & Lin, D. K. J., Jan 1 1998, In : Communications in Statistics - Theory and Methods. 27, 6, p. 1289-1303 15 p.

Research output: Contribution to journalReview article

Supersaturated Design
Box plot
Graphical Methods
Information Matrix
Single valued
1997
6 Citations (Scopus)

20 Statistical analysis with incomplete data: A selective review

Akritas, M. G. & LaValley, M. P., Dec 1 1997, In : Handbook of Statistics. 15, p. 551-632 82 p.

Research output: Contribution to journalReview article

Incomplete Data
Statistical Analysis
Statistical methods
Review
71 Citations (Scopus)

Radio-loud active galaxies in the northern ROSAT All-Sky Survey: I. Radio identifications

Laurent-Muehleisen, S. A., Kollgaard, R. I., Ryan, P. J., Feigelson, E., Brinkmann, W. & Siebert, J., Apr 2 1997, In : Astronomy and Astrophysics Supplement Series. 122, 2, p. 235-247 13 p.

Research output: Contribution to journalReview article

active galaxies
radio galaxies
radio
BL Lacertae objects
catalogs