• 1543 Citations
  • 16 h-Index
19972020

Research output per year

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Research Output

  • 1543 Citations
  • 16 h-Index
  • 28 Article
  • 1 Chapter
  • 1 Review article
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Article
2020

Cryo-EM structure of catalytic ribonucleoprotein complex RNase MRP

Perederina, A., Li, D., Lee, H., Bator, C., Berezin, I., Hafenstein, S. & Krasilnikov, A. S., Dec 1 2020, In : Nature communications. 11, 1, 3474.

Research output: Contribution to journalArticle

Open Access
2018

In vitro reconstitution and analysis of eukaryotic RNase P RNPs

Perederina, A., Berezin, I. & Krasilnikov, A. S., Jan 1 2018, In : Nucleic acids research. 46, 13, p. 6857-6868 12 p.

Research output: Contribution to journalArticle

1 Scopus citations
2016

Active Yeast Telomerase Shares Subunits with Ribonucleoproteins RNase P and RNase MRP

Lemieux, B., Laterreur, N., Perederina, A., Noël, J. F., Dubois, M. L., Krasilnikov, A. S. & Wellinger, R. J., May 19 2016, In : Cell. 165, 5, p. 1171-1181 11 p.

Research output: Contribution to journalArticle

32 Scopus citations
2015

Footprinting analysis of interactions between the largest eukaryotic RNase P/MRP protein Pop1 and RNase P/MRP RNA components

Fagerlund, R. D., Perederina, A., Berezin, I. & Krasilnikov, A. S., Sep 1 2015, In : RNA. 21, 9, p. 1591-1605 15 p.

Research output: Contribution to journalArticle

10 Scopus citations
2013
4 Scopus citations
2012
14 Scopus citations
2011

Interactions of a Pop5/Rpp1 heterodimer with the catalytic domain of RNase MRP

Perederina, A., Khanova, E., Quan, C., Berezin, I., Esakova, O. & Krasilnikov, A. S., Oct 1 2011, In : RNA. 17, 10, p. 1922-1931 10 p.

Research output: Contribution to journalArticle

7 Scopus citations

Structure and function of a membrane component SecDF that enhances protein export

Tsukazaki, T., Mori, H., Echizen, Y., Ishitani, R., Fukai, S., Tanaka, T., Perederina, A., Vassylyev, D. G., Kohno, T., Maturana, A. D., Ito, K. & Nureki, O., Jun 8 2011, In : Nature. 474, 7350, p. 235-238 4 p.

Research output: Contribution to journalArticle

140 Scopus citations

Substrate recognition by ribonucleoprotein ribonuclease MRP

Esakova, O., Perederina, A., Quan, C., Berezin, I. & Krasilnikov, A. S., Feb 1 2011, In : RNA. 17, 2, p. 356-364 9 p.

Research output: Contribution to journalArticle

16 Scopus citations
2010

Eukaryotic ribonucleases P/MRP: The crystal structure of the P3 domain

Perederina, A., Esakova, O., Quan, C., Khanova, E. & Krasilnikov, A. S., Feb 1 2010, In : EMBO Journal. 29, 4, p. 761-769 9 p.

Research output: Contribution to journalArticle

37 Scopus citations
2009
7 Scopus citations
2008

Conformational transition of Sec machinery inferred from bacterial SecYE structures

Tsukazaki, T., Mori, H., Fukai, S., Ishitani, R., Mori, T., Dohmae, N., Perederina, A., Sugita, Y., Vassylyev, D. G., Ito, K. & Nureki, O., Oct 16 2008, In : Nature. 455, 7215, p. 988-991 4 p.

Research output: Contribution to journalArticle

177 Scopus citations

Footprinting analysis demonstrates extensive similarity between eukaryotic RNase P and RNase MRP holoenzymes

Esakova, O., Perederina, A., Quan, C., Schmitt, M. E. & Kiasilnikov, A. S., Aug 1 2008, In : RNA. 14, 8, p. 1558-1567 10 p.

Research output: Contribution to journalArticle

23 Scopus citations
2007

Specific binding of a Pop6/Pop7 heterodimer to the P3 stem of the yeast RNase MRP and RNase P RNAs

Perederina, A., Esakova, O., Koc, H., Schmitt, M. E. & Krasilnikov, A. S., Oct 1 2007, In : RNA. 13, 10, p. 1648-1655 8 p.

Research output: Contribution to journalArticle

34 Scopus citations

Structural basis for transcription elongation by bacterial RNA polymerase

Vassylyev, D. G., Vassylyeva, M. N., Perederina, A., Tahirov, T. H. & Artsimovitch, I., Jul 12 2007, In : Nature. 448, 7150, p. 157-162 6 p.

Research output: Contribution to journalArticle

303 Scopus citations
2006
5 Scopus citations

Purification, crystallization and preliminary X-ray diffraction of SecDF, a translocon-associated membrane protein, from Thermus thermophilus

Tsukazaki, T., Mori, H., Fukai, S., Numata, T., Perederina, A., Adachi, H., Matsumura, H., Takano, K., Murakami, S., Inoue, T., Mori, Y., Sasaki, T., Vassylyev, D. G., Nureki, O. & Ito, K., Apr 1 2006, In : Acta Crystallographica Section F: Structural Biology and Crystallization Communications. 62, 4, p. 376-380 5 p.

Research output: Contribution to journalArticle

26 Scopus citations

Regulation through the RNA polymerase secondary channel: Structural and functional variability of the coiled-coil transcription factors

Symersky, J., Perederina, A., Vassylyeva, M. N., Svetlov, V., Artsimovitch, I. & Vassylyev, D. G., Jan 20 2006, In : Journal of Biological Chemistry. 281, 3, p. 1309-1312 4 p.

Research output: Contribution to journalArticle

35 Scopus citations
2005

Allosteric modulation of the RNA polymerase catalytic reaction is an essential component of transcription control by rifamycins

Artsimovitch, I., Vassylyeva, M. N., Svetlov, D., Svetlov, V., Perederina, A., Igarashi, N., Matsugaki, N., Wakatsuki, S., Tahirov, T. H. & Vassylyev, D. G., Aug 12 2005, In : Cell. 122, 3, p. 351-363 13 p.

Research output: Contribution to journalArticle

125 Scopus citations

Structural basis for transcription inhibition by tagetitoxin

Vassylyev, D. G., Svetlov, V., Vassylyeva, M. N., Perederina, A., Igarashi, N., Matsugaki, N., Wakatsuki, S. & Artsimovitch, I., Dec 27 2005, In : Nature Structural and Molecular Biology. 12, 12, p. 1086-1093 8 p.

Research output: Contribution to journalArticle

60 Scopus citations

Structural basis of transcription inhibition by antibiotic streptolydigin

Temiakov, D., Zenkin, N., Vassylyeva, M. N., Perederina, A., Tahirov, T. H., Kashkina, E., Savkina, M., Zorov, S., Nikiforov, V., Igarashi, N., Matsugaki, N., Wakatsuki, S., Severinov, K. & Vassylyev, D. G., Sep 2 2005, In : Molecular cell. 19, 5, p. 655-666 12 p.

Research output: Contribution to journalArticle

115 Scopus citations

Structure of Pseudomonas aeruginosa Hfq protein

Nikulin, A., Stolboushkina, E., Perederina, A., Vassilieva, I., Blaesi, U., Moll, I., Kachalova, G., Yokoyama, S., Vassylyev, D., Garber, M. & Nikonov, S., Feb 1 2005, In : Acta Crystallographica Section D: Biological Crystallography. 61, 2, p. 141-146 6 p.

Research output: Contribution to journalArticle

58 Scopus citations
2004

Cloning, expression, purification, crystallization and initial crystallographic analysis of transcription factor DksA from Escherichia coli

Vassylyeva, M. N., Perederina, A. A., Svetlov, V., Yokoyama, S., Artsimovitch, I. & Vassylyev, D. G., Sep 1 2004, In : Acta Crystallographica Section D: Biological Crystallography. 60, 9, p. 1611-1613 3 p.

Research output: Contribution to journalArticle

6 Scopus citations

Regulation through the secondary channel - Structural framework for ppGpp-DksA synergism during transcription

Perederina, A., Svetlov, V., Vassylyeva, M. N., Tahirov, T. H., Yokoyama, S., Artsimovitch, I. & Vassylyev, D. G., Aug 6 2004, In : Cell. 118, 3, p. 297-309 13 p.

Research output: Contribution to journalArticle

245 Scopus citations
2002

Crystallization of RNA/protein complexes

Garber, M., Gongadze, G., Meshcheryakov, V., Nikonov, O., Nikulin, A., Perederina, A., Piendl, W., Serganov, A. & Tishchenko, S., Oct 1 2002, In : Acta Crystallographica Section D: Biological Crystallography. 58, 10 II, p. 1664-1669 6 p.

Research output: Contribution to journalArticle

5 Scopus citations

Detailed analysis of RNA-protein interactions within the bacterial ribosomal protein L5/5S rRNA complex

Perederina, A., Nevskaya, N., Nikonov, O., Nikulin, A., Dumas, P., Yao, M., Tanaka, I., Garber, M., Gongadze, G. & Nikonov, S., Dec 1 2002, In : RNA. 8, 12, p. 1548-1557 10 p.

Research output: Contribution to journalArticle

23 Scopus citations
2001

The Thermus thermophilus 5S rRNA-protein complex: Identification of specific binding sites for proteins L5 and L18 in the 5S rRNA

Gongadze, G. M., Perederina, A. A., Meshcheryakov, V. A., Fedorov, R. V., Moskalenko, S. E., Rak, A. V., Serganov, A. A., Shcherbakov, D. V., Nikonov, S. V. & Garber, M. B., Jul 1 2001, In : Molecular Biology. 35, 4, p. 521-526 6 p.

Research output: Contribution to journalArticle

4 Scopus citations
1997

RNA-binding properties of an unusual ribosomal protein TL5 from Thermus thermophilus

Meshcheryakov, V. A., Gryaznova, O. I., Davydova, N. L., Mudrik, E. S., Perederina, A. A., Vasilenko, K. S., Gongadze, G. M. & Garber, M. B., Dec 1 1997, In : Biochemistry (Moscow). 62, 5, p. 537-542 6 p.

Research output: Contribution to journalArticle

7 Scopus citations