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Fingerprint Dive into the research topics where Anton Nekrutenko is active. These topic labels come from the works of this person. Together they form a unique fingerprint.

  • 13 Similar Profiles
Galaxies Medicine & Life Sciences
Genome Medicine & Life Sciences
Biological Science Disciplines Medicine & Life Sciences
Research Personnel Medicine & Life Sciences
Human Genome Medicine & Life Sciences
Software Medicine & Life Sciences
Computational Biology Medicine & Life Sciences
Genes Medicine & Life Sciences

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Projects 2009 2023

Implementing the Genomic Data Science Analysis, Visualization, and Informatics Lab-space (AnVIL)

Nekrutenko, A., Taylor, J. P., Leek, J. T., Waldron, L. D., Carey, V. J., Morgan, M., Schatz, M. & Goecks, J.

National Institutes of Health

9/21/186/30/23

Project: Research project

Visualization
Application programming interfaces (API)
Space platforms
Costs
Natural sciences computing

Tuning big data analysis infrastructure for HIV research

Nekrutenko, A., Taylor, J. P. & Pond, S. L. K.

National Institutes of Health

6/26/175/31/22

Project: Research project

Tuning
Genes
Big data
Costs
Galaxies
Throughput
Cloud computing
Computational methods
Statistical methods
Cloud computing
Availability
Costs
DNA sequences
Computer programming
Polymorphism
User interfaces
Interoperability
Interfaces (computer)
Genes

Research Output 1998 2019

Predicting runtimes of bioinformatics tools based on historical data: five years of Galaxy usage

Tyryshkina, A., Coraor, N. & Nekrutenko, A., Sep 15 2019, In : Bioinformatics (Oxford, England). 35, 18, p. 3453-3460 8 p.

Research output: Contribution to journalArticle

Galaxies
Historical Data
Bioinformatics
Computational Biology
Random Forest
2 Citations (Scopus)

Biology needs evolutionary software tools: Let's build them right

Nekrutenko, A., Team, G., Goecks, J., Taylor, J. & Blankenberg, D., Jun 1 2018, In : Molecular biology and evolution. 35, 6, p. 1372-1375 4 p.

Research output: Contribution to journalArticle

life science
Software
Biological Science Disciplines
software
Biological Sciences
3 Citations (Scopus)

Child Weight Gain Trajectories Linked To Oral Microbiota Composition

Craig, S., Blankenberg, D., Parodi, A. C. L., Paul, I., Birch, L. L., Williams, J. S., Marini, M. E., Stokes, J. L., Nekrutenko, A., Reimherr, M. L., Chiaromonte, F. & Makova, K. D., Dec 1 2018, In : Scientific reports. 8, 1, 14030.

Research output: Contribution to journalArticle

Microbiota
Weight Gain
Growth
Bacteroidetes
Diet
1 Citation (Scopus)

Community-Driven Data Analysis Training for Biology

Galaxy Training Network, Jun 27 2018, In : Cell Systems. 6, 6, p. 752-758.e1

Research output: Contribution to journalArticle

Biological Science Disciplines
Web Browser
Research Personnel
Explosions
Internet
4 Citations (Scopus)

Practical Computational Reproducibility in the Life Sciences

Grüning, B., Chilton, J. M., Köster, J., Dale, R., Soranzo, N., van den Beek, M., Goecks, J., Backofen, R., Nekrutenko, A. & Taylor, J., Jun 27 2018, In : Cell Systems. 6, 6, p. 631-635 5 p.

Research output: Contribution to journalComment/debate

Biological Science Disciplines
Software
Technology
Workflow
Computational Biology