• 514 Citations
  • 13 h-Index
20032019

Research output per year

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Research Output

  • 514 Citations
  • 13 h-Index
  • 21 Article
  • 1 Comment/debate
  • 1 Review article
2019

Corrigendum to: ProtaBank: A repository for protein design and engineering data (Protein Science, (2018), 27, 6, (1113-1124), 10.1002/pro.3406)

Wang, C. Y., Chang, P. M., Ary, M. L., Allen, B. D., Chica, R. A., Mayo, S. L. & Olafson, B. D., Mar 2019, In : Protein Science. 28, 3, 1 p.

Research output: Contribution to journalComment/debate

Evidence for Modulation of Oxygen Rebound Rate in Control of Outcome by Iron(II)- And 2-Oxoglutarate-Dependent Oxygenases

Pan, J., Wenger, E. S., Matthews, M. L., Pollock, C. J., Bhardwaj, M., Kim, A. J., Allen, B. D., Grossman, R. B., Krebs, C. & Martin Bollinger, J., Sep 25 2019, In : Journal of the American Chemical Society. 141, 38, p. 15153-15165 13 p.

Research output: Contribution to journalArticle

3 Scopus citations

Hydrogen Donation but not Abstraction by a Tyrosine (Y68) during Endoperoxide Installation by Verruculogen Synthase (FtmOx1)

Dunham, N. P., Del Río Pantoja, J. M., Zhang, B., Rajakovich, L. J., Allen, B. D., Krebs, C., Boal, A. K. & Bollinger, J. M., Jun 26 2019, In : Journal of the American Chemical Society. 141, 25, p. 9964-9979 16 p.

Research output: Contribution to journalArticle

3 Scopus citations
2018

Inkjet Printing of Self-Assembled 2D Titanium Carbide and Protein Electrodes for Stimuli-Responsive Electromagnetic Shielding

Vural, M., Pena-Francesch, A., Bars-Pomes, J., Jung, H., Gudapati, H., Hatter, C. B., Allen, B. D., Anasori, B., Ozbolat, I. T., Gogotsi, Y. & Demirel, M. C., Aug 8 2018, In : Advanced Functional Materials. 28, 32, 1801972.

Research output: Contribution to journalArticle

35 Scopus citations

Mechanical Properties of Tandem-Repeat Proteins Are Governed by Network Defects

Pena-Francesch, A., Jung, H., Segad, M., Colby, R. H., Allen, B. D. & Demirel, M. C., Mar 12 2018, In : ACS Biomaterials Science and Engineering. 4, 3, p. 884-891 8 p.

Research output: Contribution to journalArticle

7 Scopus citations

Metal-free class Ie ribonucleotide reductase from pathogens initiates catalysis with a tyrosinederived dihydroxyphenylalanine radical

Blaesi, E. J., Palowitch, G. M., Hu, K., Kim, A. J., Rose, H. R., Alapati, R., Lougee, M. G., Kim, H. J., Taguchi, A. T., Tan, K. O., Laremore, T. N., Griffin, R. G., Krebs, C., Matthews, M. L., Silakov, A., Bollinger, J. M., Allen, B. D. & Boal, A. K., Oct 2 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 40, p. 10022-10027 6 p.

Research output: Contribution to journalArticle

14 Scopus citations

Programmable Proton Conduction in Stretchable and Self-Healing Proteins

Pena-Francesch, A., Jung, H., Hickner, M. A., Tyagi, M., Allen, B. D. & Demirel, M. C., Feb 13 2018, In : Chemistry of Materials. 30, 3, p. 898-905 8 p.

Research output: Contribution to journalArticle

9 Scopus citations

ProtaBank: A repository for protein design and engineering data

Wang, C. Y., Chang, P. M., Ary, M. L., Allen, B. D., Chica, R. A., Mayo, S. L. & Olafson, B. D., Jun 2018, In : Protein Science. 27, 6, p. 1113-1124 12 p.

Research output: Contribution to journalArticle

9 Scopus citations

Research Update: Programmable tandem repeat proteins inspired by squid ring teeth

Pena-Francesch, A., Domeradzka, N. E., Jung, H., Barbu, B., Vural, M., Kikuchi, Y., Allen, B. D. & Demirel, M. C., Jan 1 2018, In : APL Materials. 6, 1, 010701.

Research output: Contribution to journalArticle

7 Scopus citations

Tunable thermal transport and reversible thermal conductivity switching in topologically networked bio-inspired materials

Tomko, J. A., Pena-Francesch, A., Jung, H., Tyagi, M., Allen, B. D., Demirel, M. C. & Hopkins, P. E., Oct 1 2018, In : Nature nanotechnology. 13, 10, p. 959-964 6 p.

Research output: Contribution to journalArticle

23 Scopus citations
2017

Programmable molecular composites of tandem proteins with graphene oxide for efficient bimorph actuators

Vural, M., Lei, Y., Pena-Francesch, A., Jung, H., Allen, B., Terrones, M. & Demirel, M. C., Jul 1 2017, In : Carbon. 118, p. 404-412 9 p.

Research output: Contribution to journalArticle

17 Scopus citations

Ultrafast laser-probing spectroscopy for studying molecular structure of protein aggregates

Jung, H., Szwejkowski, C. J., Pena-Francesch, A., Tomko, J. A., Allen, B., Özdemir, Ş. K., Hopkins, P. & Demirel, M. C., May 7 2017, In : Analyst. 142, 9, p. 1434-1441 8 p.

Research output: Contribution to journalArticle

4 Scopus citations

Visualizing the reaction cycle in an Iron(II)- and 2-(Oxo)-glutarate-dependent hydroxylase

Mitchell, A. J., Dunham, N. P., Martinie, R. J., Bergman, J. A., Pollock, C. J., Hu, K., Allen, B. D., Chang, W. C., Silakov, A., Bollinger, J. M., Krebs, C. & Boal, A. K., Jan 1 2017, In : Journal of the American Chemical Society. 139, 39, p. 13830-13836 7 p.

Research output: Contribution to journalArticle

34 Scopus citations
2016

Molecular tandem repeat strategy for elucidating mechanical properties of high-strength proteins

Jung, H., Pena-Francesch, A., Saadat, A., Sebastian, A., Kim, D. H., Hamilton, R. F., Albert, I., Allen, B. D. & Demirel, M. C., Jun 7 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 23, p. 6478-6483 6 p.

Research output: Contribution to journalArticle

25 Scopus citations
2010

An efficient algorithm for multistate protein design based on faster

Allen, B. D. & Mayo, S. L., Apr 15 2010, In : Journal of Computational Chemistry. 31, 5, p. 904-916 13 p.

Research output: Contribution to journalArticle

41 Scopus citations
47 Scopus citations

Generation of longer emission wavelength red fluorescent proteins using computationally designed libraries

Chica, R. A., Moore, M. M., Allen, B. D. & Mayo, S. L., Nov 23 2010, In : Proceedings of the National Academy of Sciences of the United States of America. 107, 47, p. 20257-20262 6 p.

Research output: Contribution to journalArticle

62 Scopus citations
2008

Conformational analysis of a covalently cross-linked Watson-Crick base pair model

Jensen, E. A., Allen, B. D., Kishi, Y. & O'Leary, D. J., Nov 15 2008, In : Bioorganic and Medicinal Chemistry Letters. 18, 22, p. 5884-5887 4 p.

Research output: Contribution to journalArticle

2007

Computational protein design promises to revolutionize protein engineering

Alvizo, O., Allen, B. D. & Mayo, S. L., Jan 1 2007, In : BioTechniques. 42, 1, p. 31-39 9 p.

Research output: Contribution to journalReview article

24 Scopus citations
2006

Combinatorial methods for small-molecule placement in computational enzyme design

Lassila, J. K., Privett, H. K., Allen, B. D. & Mayo, S. L., Nov 7 2006, In : Proceedings of the National Academy of Sciences of the United States of America. 103, 45, p. 16710-16715 6 p.

Research output: Contribution to journalArticle

74 Scopus citations

Dramatic performance enhancements for the FASTER optimization algorithm

Allen, B. D. & Mayo, S. L., Jul 30 2006, In : Journal of Computational Chemistry. 27, 10, p. 1071-1075 5 p.

Research output: Contribution to journalArticle

47 Scopus citations
2005

An isosparteine derivative for stereochemical assignment of stereogenic (chiral) methyl groups using tritium NMR: Theory and experiment

Allen, B. D., Cintrat, J. C., Faucher, N., Berthault, P., Rousseau, B. & O'Leary, D. J., Jan 12 2005, In : Journal of the American Chemical Society. 127, 1, p. 412-420 9 p.

Research output: Contribution to journalArticle

18 Scopus citations
2003

Fomenting proton anisochronicity in the CH2D group

Allen, B. D. & O'Leary, D. J., Jul 30 2003, In : Journal of the American Chemical Society. 125, 30, p. 9018-9019 2 p.

Research output: Contribution to journalArticle

11 Scopus citations