• 290 Citations
  • 8 h-Index
20112019
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Fingerprint Dive into the research topics where David Koslicki is active. These topic labels come from the works of this person. Together they form a unique fingerprint.

  • 1 Similar Profiles
Metagenomics Medicine & Life Sciences
Metagenome Medicine & Life Sciences
Microbiota Medicine & Life Sciences
Genes Chemical Compounds
Genome Medicine & Life Sciences
Topological Entropy Mathematics
Firearms Medicine & Life Sciences
Bioinformatics Chemical Compounds

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Research Output 2011 2019

  • 290 Citations
  • 8 h-Index
  • 18 Article
  • 1 Conference contribution
  • 1 Letter
1 Citation (Scopus)

Assessing taxonomic metagenome profilers with OPAL

Meyer, F., Bremges, A., Belmann, P., Janssen, S., McHardy, A. C. & Koslicki, D., Mar 4 2019, In : Genome biology. 20, 1, 51.

Research output: Contribution to journalArticle

Open Access
Metagenome
profiler
visualization
explosive
Microbiota
2 Citations (Scopus)

Improving MinHash via the containment index with applications to metagenomic analysis

Koslicki, D. & Zabeti, H., Aug 1 2019, In : Applied Mathematics and Computation. 354, p. 206-215 10 p.

Research output: Contribution to journalArticle

Microorganisms
Probabilistic Methods
Bloom Filter
Space Complexity
Time Complexity

MiCoP: Microbial community profiling method for detecting viral and fungal organisms in metagenomic samples

Lapierre, N., Mangul, S., Alser, M., Mandric, I., Wu, N. C., Koslicki, D. & Eskin, E., Jun 6 2019, In : BMC genomics. 20, 423.

Research output: Contribution to journalArticle

Open Access
Metagenomics
Microbiota
Eukaryota
Viruses
Databases
2 Citations (Scopus)

EMDUniFrac: exact linear time computation of the UniFrac metric and identification of differentially abundant organisms

McClelland, J. & Koslicki, D., Oct 1 2018, In : Journal of Mathematical Biology. 77, 4, p. 935-949 15 p.

Research output: Contribution to journalArticle

Linear Time
Metagenome
Boidae
Python
Metric
2 Citations (Scopus)

Exact probabilities for the indeterminacy of complex networks as perceived through press perturbations

Koslicki, D. & Novak, M., Mar 1 2018, In : Journal of Mathematical Biology. 76, 4, p. 877-909 33 p.

Research output: Contribution to journalArticle

Indeterminacy
Complex networks
Complex Networks
Uncertainty
uncertainty