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19942019
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Research Output 1994 2019

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Article
2019

Comparative analysis uncovers the limitations of current molecular detection methods for Fusarium oxysporum f. Sp. Cubense Race 4 strains

Magdama, F., Monserrate-Maggi, L., Serrano, L., Sosa, D., Geiser, D. M. & Jimenez Gasco, M. D. M., Jan 1 2019, In : PloS one. 14, 9, e0222727.

Research output: Contribution to journalArticle

Open Access
Musa
Fusarium
Pathogens
Fusarium oxysporum
bananas

Three novel Ambrosia Fusarium Clade species producing clavate macroconidia known (F. floridanum and F. obliquiseptatum) or predicted (F. tuaranense) to be farmed by Euwallacea spp. (Coleoptera: Scolytinae) on woody hosts

Aoki, T., Smith, J. A., Kasson, M. T., Freeman, S., Geiser, D. M., Geering, A. D. W. & O’Donnell, K., Jan 1 2019, (Accepted/In press) In : Mycologia.

Research output: Contribution to journalArticle

Ambrosia
Scolytidae
Beetles
Fusarium
Coleoptera

Unraveling the ecology and epidemiology of an emerging fungal disease, sea turtle egg fusariosis (STEF)

Smyth, C. W., Sarmiento-Ramírez, J. M., Short, D. P. G., Diéguez-Uribeondoid, J., O’donnell, K. & Geiser, D. M., May 1 2019, In : PLoS pathogens. 15, 5, e1007682.

Research output: Contribution to journalArticle

Open Access
Fusariosis
Turtles
Mycoses
Ecology
Ovum
2018
5 Citations (Scopus)

Marasas et al. 1984 “Toxigenic Fusarium Species: Identity and Mycotoxicology” revisited

O’Donnell, K., McCormick, S. P., Busman, M., Proctor, R. H., Ward, T. J., Doehring, G., Geiser, D. M., Alberts, J. F. & Rheeder, J. P., Nov 2 2018, In : Mycologia. 110, 6, p. 1058-1080 23 p.

Research output: Contribution to journalArticle

Fusarium
Trichothecenes
Spectrum Analysis
Mycotoxins
spectroscopy
2 Citations (Scopus)

Molecular systematics of two sister clades, the Fusarium concolor and F. babinda species complexes, and the discovery of a novel microcycle macroconidium–producing species from South Africa

Jacobs-Venter, A., Laraba, I., Geiser, D. M., Busman, M., Vaughan, M. M., Proctor, R. H., McCormick, S. P. & O’Donnell, K., Nov 2 2018, In : Mycologia. 110, 6, p. 1189-1204 16 p.

Research output: Contribution to journalArticle

molecular systematics
Mycotoxins
Fusarium
species complex
South Africa
2017
11 Citations (Scopus)

Population genetic structure and mycotoxin potential of the wheat crown rot and head blight pathogen Fusarium culmorum in Algeria

Laraba, I., Boureghda, H., Abdallah, N., Bouaicha, O., Obanor, F., Moretti, A., Geiser, D. M., Kim, H. S., McCormick, S. P., Proctor, R. H., Kelly, A. C., Ward, T. J. & O'Donnell, K., Jun 1 2017, In : Fungal Genetics and Biology. 103, p. 34-41 8 p.

Research output: Contribution to journalArticle

Trichothecenes
Algeria
Mycotoxins
Genetic Structures
Fusarium
2016
30 Citations (Scopus)

Epitypification of Fusisporium (Fusarium) solani and its assignment to a common phylogenetic species in the Fusarium solani species complex

Schroers, H. J., Samuels, G. J., Zhang, N., Short, D. P. G., Juba, J. & Geiser, D. M., Jan 1 2016, In : Mycologia. 108, 4, p. 806-819 14 p.

Research output: Contribution to journalArticle

Fusarium solani
Fusarium
species complex
Solanum tuberosum
phylogenetics
6 Citations (Scopus)

Genome sequence of fusarium isolate MYA-4552 from the midgut of Anoplophora glabripennis, an invasive, wood-boring beetle

Herr, J. R., Scully, E. D., Geib, S. M., Hoover, K., Carlson, J. E. & Geiser, D. M., Jan 1 2016, In : Genome Announcements. 4, 4, e00544-16.

Research output: Contribution to journalArticle

Beetles
Fusarium
Genome
Insects
Fungi
14 Citations (Scopus)

Phylogenetic resolution of deep eukaryotic and fungal relationships using highly conserved low-copy nuclear genes

Ren, R., Sun, Y., Zhao, Y., Geiser, D. M., Ma, H. & Zhou, X., Jan 1 2016, In : Genome Biology and Evolution. 8, 9, p. 2683-2701 19 p.

Research output: Contribution to journalArticle

phylogenetics
gene
phylogeny
Genes
genes
16 Citations (Scopus)

Veterinary fusarioses within the United States

O'Donnell, K., Sutton, D. A., Wiederhold, N., Robert, V. A. R. G., Crous, P. W. & Geiser, D. M., Nov 1 2016, In : Journal of clinical microbiology. 54, 11, p. 2813-2819 7 p.

Research output: Contribution to journalArticle

Fusarium
Mycoses
Keratitis
Invertebrates
Horses
2015
19 Citations (Scopus)

Clustering of two genes putatively involved in cyanate detoxification evolved recently and independently in multiple fungal lineages

Elmore, M. H., McGary, K. L., Wisecaver, J. H., Slot, J. C., Geiser, D. M., Sink, S., O'Donnell, K. & Rokas, A., Jan 1 2015, In : Genome biology and evolution. 7, 3, p. 789-800 12 p.

Research output: Contribution to journalArticle

cyanates
Cyanates
Multigene Family
detoxification
multigene family
57 Citations (Scopus)

Discordant phylogenies suggest repeated host shifts in the Fusarium-Euwallacea ambrosia beetle mutualism

O'Donnell, K., Sink, S., Libeskind-Hadas, R., Hulcr, J., Kasson, M. T., Ploetz, R. C., Konkol, J. L., Ploetz, J. N., Carrillo, D., Campbell, A., Duncan, R. E., Liyanage, P. N. H., Eskalen, A., Na, F., Geiser, D. M., Bateman, C., Freeman, S., Mendel, Z., Sharon, M., Aoki, T. & 2 others, Cossé, A. A. & Rooney, A. P., Sep 1 2015, In : Fungal Genetics and Biology. 82, p. 277-290 14 p.

Research output: Contribution to journalArticle

Ambrosia
Symbiosis
Beetles
Fusarium
Phylogeny
9 Citations (Scopus)

First report of fusarium solani phylogenetic species 25 associated with early stages of thousand cankers disease on juglans nigra and Juglans regia in Italy

Montecchio, L., Faccoli, M., Short, D. P. G., Fanchin, G., Geiser, D. M. & Kasson, M. T., Jan 1 2015, In : Plant disease. 99, 8, 1 p.

Research output: Contribution to journalArticle

Juglans nigra
Juglans regia
Fusarium solani
Italy
phylogeny
13 Citations (Scopus)

Fusarium dactylidis sp. nov., a novel nivalenol toxin-producing species sister to F. pseudograminearum isolated from orchard grass (Dactylis glomerata) in Oregon and New Zealand

Aoki, T., Vaughan, M. M., McCormick, S. P., Busman, M., Ward, T. J., Kelly, A., O'Donnell, K., Johnston, P. R. & Geiser, D. M., Jan 1 2015, In : Mycologia. 107, 2, p. 409-418 10 p.

Research output: Contribution to journalArticle

Fusarium pseudograminearum
Dactylis
nivalenol
Dactylis glomerata
Fusarium

Mating type and spore killing characterization of Fusarium verticillioides strains

Guo, L., Blatt, A. Z., Geiser, D. M., Jimenez Gasco, M. D. M. & Kuldau, G. A., Jan 1 2015, In : Mycological Progress. 14, 4

Research output: Contribution to journalArticle

Fusarium
Spores
spore
Genetic Crosses
spores
27 Citations (Scopus)

Unravelling the diversity behind the Ophiocordyceps unilateralis (Ophiocordycipitaceae) complex: Three new species of zombie-ant fungi from the Brazilian Amazon

Araújo, J. P. M., Evans, H. C., Geiser, D. M., Mackay, W. P. & Hughes, D. P., Jul 24 2015, In : Phytotaxa. 220, 3, p. 224-238 15 p.

Research output: Contribution to journalArticle

Ophiocordyceps
ant
Formicidae
fungus
new species
2014
22 Citations (Scopus)
Fusarium
recombination
hybridization
pathogen
loci
2013
71 Citations (Scopus)

An inordinate fondness for Fusarium: Phylogenetic diversity of fusaria cultivated by ambrosia beetles in the genus Euwallacea on avocado and other plant hosts

Kasson, M. T., O'Donnell, K., Rooney, A. P., Sink, S., Ploetz, R. C., Ploetz, J. N., Konkol, J. L., Carrillo, D., Freeman, S., Mendel, Z., Smith, J. A., Black, A. W., Hulcr, J., Bateman, C., Stefkova, K., Campbell, P. R., Geering, A. D. W., Dann, E. K., Eskalen, A., Mohotti, K. & 5 others, Short, D. P. G., Aoki, T., Fenstermacher, K. A., Davis, D. D. & Geiser, D. M., Jul 1 2013, In : Fungal Genetics and Biology. 56, p. 147-157 11 p.

Research output: Contribution to journalArticle

Persea
Ambrosia
Beetles
Fusarium
Symbiosis
158 Citations (Scopus)

Fusarium pathogenomics

Ma, L. J., Geiser, D. M., Proctor, R. H., Rooney, A. P., O'Donnell, K., Trail, F., Gardiner, D. M., Manners, J. M. & Kazan, K., Sep 1 2013, In : Annual Review of Microbiology. 67, p. 399-416 18 p.

Research output: Contribution to journalArticle

Fusarium
Virulence
Genome
Lycopersicon esculentum
Chromosomes, Human, 19-20
12 Citations (Scopus)

Fusarium torreyae sp. nov., a pathogen causing canker disease of florida torreya (torreya taxifolia), a critically endangered conifer restricted to northern florida and southwestern georgia

Aoki, T., Smith, J. J., Mount, L. L., Geiser, D. M. & O'Donnell, K., Aug 15 2013, In : Mycologia. 105, 2, p. 312-319 8 p.

Research output: Contribution to journalArticle

Taxaceae
Torreya
Coniferophyta
Fusarium
conifers
99 Citations (Scopus)

One fungus, one name: Defining the genus Fusarium in a scientifically robust way that preserves longstanding use

Geiser, D. M., Aoki, T., Bacon, C. W., Baker, S. E., Bhattacharyya, M. K., Brandt, M. E., Brown, D. W., Burgess, L. W., Chulze, S., Coleman, J. J., Correll, J. C., Covert, S. F., Crous, P. W., Cuomo, C. A., De Hoog, G. S., Di Pietro, A., Elmer, W. H., Epstein, L., Frandsen, R. J. N., Freeman, S. & 46 others, Gagkaeva, T., Glenn, A. E., Gordon, T. R., Gregory, N. F., Hammond-Kosack, K. E., Hanson, L. E., Del Mar Jímenez-Gasco, M., Kang, S., Corby Kistler, H., Kuldau, G. A., Leslie, J. F., Logrieco, A., Lu, G., Lysøe, E., Ma, L. J., McCormick, S. P., Migheli, Q., Moretti, A., Munaut, F., O'Donnell, K., Pfenning, L., Ploetz, R. C., Proctor, R. H., Rehner, S. A., Robert, V. A. R. G., Rooney, A. P., Bin Salleh, B., Scandiani, M. M., Scauflaire, J., Short, D. P. G., Steenkamp, E., Suga, H., Summerell, B. A., Sutton, D. A., Thrane, U., Trail, F., Van Diepeningen, A., VanEtten, H. D., Viljoen, A., Waalwijk, C., Ward, T. J., Wingfield, M. J., Xu, J. R., Yang, X. B., Yli-Mattila, T. & Zhang, N., May 1 2013, In : PHYTOPATHOLOGY. 103, 5, p. 400-408 9 p.

Research output: Contribution to journalArticle

Fusarium
preserves
fungi
algae
teleomorphs
157 Citations (Scopus)

Phylogenetic analyses of RPB1 and RPB2 support a middle Cretaceous origin for a clade comprising all agriculturally and medically important fusaria

O'Donnell, K., Rooney, A. P., Proctor, R. H., Brown, D. W., McCormick, S. P., Ward, T. J., Frandsen, R. J. N., Lysøe, E., Rehner, S. A., Aoki, T., Robert, V. A. R. G., Crous, P. W., Groenewald, J. Z., Kang, S. & Geiser, D. M., Mar 1 2013, In : Fungal Genetics and Biology. 52, p. 20-31 12 p.

Research output: Contribution to journalArticle

Fusarium
Hypocreales
Angiosperms
Bayes Theorem
RNA Polymerase II
84 Citations (Scopus)

Phylogenetic relationships among members of the Fusarium solani species complex in human infections and the descriptions of F. keratoplasticum sp. nov. and F. petroliphilum stat. nov.

Short, D. P. G., O'Donnell, K., Thrane, U., Nielsen, K. F., Zhang, N., Juba, J. H. & Geiser, D. M., Apr 1 2013, In : Fungal Genetics and Biology. 53, p. 59-70 12 p.

Research output: Contribution to journalArticle

Fusarium
Sanitary Engineering
Infection
Keratitis
Biofilms
9 Citations (Scopus)

Phytophthora database 2.0: Update and future direction

Park, B., Martin, F., Geiser, D. M., Kim, H. S., Mansfield, M. A., Nikolaeva, E., Park, S. Y., Coffey, M. D., Russo, J., Kim, S. H., Balci, Y., Abad, Z. G., Burgess, T., Grünwald, N. J., Cheong, K., Choi, J., Lee, Y. H. & Kang, S., Dec 1 2013, In : PHYTOPATHOLOGY. 103, 12, p. 1204-1208 5 p.

Research output: Contribution to journalArticle

Phytophthora
loci
sequence alignment
geographic information systems
provenance
2012
81 Citations (Scopus)

Phylogenetic diversity of insecticolous fusaria inferred from multilocus DNA sequence data and their molecular identification via FUSARIUM-ID and Fusarium MLST

O'Donnell, K., Humber, R. A., Geiser, D. M., Kang, S., Park, B., Robert, V. A. R. G., Crous, P. W., Johnston, P. R., Aoki, T., Rooney, A. P. & Rehner, S. A., Mar 1 2012, In : Mycologia. 104, 2, p. 427-445 19 p.

Research output: Contribution to journalArticle

Fusarium
species complex
insect
phylogenetics
Insects
2011
41 Citations (Scopus)

Cyber infrastructure for Fusarium: Three integrated platforms supporting strain identification, phylogenetics, comparative genomics and knowledge sharing

Park, B., Park, J., Cheong, K. C., Choi, J., Jung, K., Kim, D., Lee, Y. H., Ward, T. J., O'Donnell, K., Geiser, D. M. & Kang, S., Jan 1 2011, In : Nucleic acids research. 39, SUPPL. 1, p. D640-D646

Research output: Contribution to journalArticle

Fusarium
Genomics
Genome
68 Citations (Scopus)

Expression of innate and adaptive immune mediators in human corneal tissue infected with Aspergillus or Fusarium

Karthikeyan, R. S., Leal, S. M., Prajna, N. V., Dharmalingam, K., Geiser, D. M., Pearlman, E. & Lalitha, P., Sep 15 2011, In : Journal of Infectious Diseases. 204, 6, p. 942-950 9 p.

Research output: Contribution to journalArticle

Fusarium
Aspergillus
Cornea
Corneal Ulcer
Interleukin-17
48 Citations (Scopus)

New species from the Fusarium solani species complex derived from perithecia and soil in the old world tropics

Nalim, F. A., Samuels, G. J., Wijesundera, R. L. & Geiser, D. M., Nov 1 2011, In : Mycologia. 103, 6, p. 1302-1330 29 p.

Research output: Contribution to journalArticle

Fusarium solani
Fusarium
species complex
tropics
Soil
213 Citations (Scopus)

The Amsterdam Declaration on Fungal Nomenclature

Hawksworth, D. L., Crous, P. W., Redhead, S. A., Reynolds, D. R., Samson, R. A., Seifert, K. A., Taylor, J. W., Wingfield, M. J., Abaci, Ö., Aime, C., Asan, A., Bai, F. Y., de Beer, Z. W., Begerow, D., Berikten, D., Boekhout, T., Buchanan, P. K., Burgess, T., Buzina, W., Cai, L. & 68 others, Cannon, P. F., Crane, J. L., Damm, U., Daniel, H. M., van Diepeningen, A. D., Druzhinina, I., Dyer, P. S., Eberhardt, U., Fell, J. W., Frisvad, J. C., Geiser, D. M., Geml, J., Glienke, C., Gräfenhan, T., Groenewald, J. Z., Groenewald, M., de Gruyter, J., Guého-Kellermann, E., Guo, L. D., Hibbett, D. S., Hong, S. B., de Hoog, G. S., Houbraken, J., Huhndorf, S. M., Hyde, K. D., Ismail, A., Johnston, P. R., Kadaifciler, D. G., Kirk, P. M., Kõljalg, U., Kurtzman, C. P., Lagneau, P. E., André Lévesque, C., Liu, X., Lombard, L., Meyer, W., Miller, A., Minter, D. W., Najafzadeh, M. J., Norvell, L., Ozerskaya, S. M., öziç, R., Pennycook, S. R., Peterson, S. W., Pettersson, O. V., Quaedvlieg, W., Robert, V. A., Ruibal, C., Schnürer, J., Schroers, H. J., Shivas, R., Slippers, B., Spierenburg, H., Takashima, M., Taskin, E., Thines, M., Thrane, U., Uztan, A. H., van Raak, M., Varga, J., Vasco, A., Verkley, G., Videira, S. I. R., de Vries, R. P., Weir, B. S., Yilmaz, N., Yurkov, A. & Zhang, N., Jun 1 2011, In : IMA Fungus. 2, 1, p. 105-112 8 p.

Research output: Contribution to journalArticle

nomenclature
Terminology
Fungi
fungus
fungi
61 Citations (Scopus)

Widespread occurrence of diverse human pathogenic types of the fungus Fusarium detected in plumbing drains

Short, D. P. G., O'Donnell, K., Zhang, N., Juba, J. H. & Geiser, D. M., Dec 1 2011, In : Journal of clinical microbiology. 49, 12, p. 4264-4272 9 p.

Research output: Contribution to journalArticle

Sanitary Engineering
Fusarium
Fungi
Multilocus Sequence Typing
Toilet Facilities
2010
6 Citations (Scopus)

Dermatitis in captive Wyoming toads (Bufo baxteri) associated with fusarium SPP

Perpiñán, D., Trupkiewicz, J. G., Armbrust, A. L., Geiser, D. M., Armstrong, S., Gamer, M. M. & Armstrong, D. L., Jan 1 2010, In : Journal of wildlife diseases. 46, 4, p. 1185-1195 11 p.

Research output: Contribution to journalArticle

Bufo
toad
toads
dermatitis
Fusarium
20 Citations (Scopus)

Fusarium oxysporum f. sp. palmarum, a novel forma specialis causing a lethal disease of syagrus romanzoffiana and Washingtonia robusta in Florida

Elliott, M. L., Des Jardin, E. A., O'Donnell, K., Geiser, D. M., Harrison, N. A. & Broschat, T. K., Jan 1 2010, In : Plant disease. 94, 1, p. 31-38 8 p.

Research output: Contribution to journalArticle

Washingtonia robusta
Syagrus romanzoffiana
lethal genes
signs and symptoms (plants)
genes
204 Citations (Scopus)

Internet-accessible DNA sequence database for identifying fusaria from human and animal infections

O'Donnell, K., Sutton, D. A., Rinaldi, M. G., Sarver, B. A. J., Balajee, S. A., Schroers, H. J., Summerbell, R. C., Robert, V. A. R. G., Crous, P. W., Zhang, N., Aoki, T., Jung, K., Park, J., Lee, Y. H., Kang, S., Park, B. & Geiser, D. M., Oct 1 2010, In : Journal of clinical microbiology. 48, 10, p. 3708-3718 11 p.

Research output: Contribution to journalArticle

Nucleic Acid Databases
Fusarium
Internet
Mycoses
Databases
38 Citations (Scopus)

Multilocus phylogenetics show high levels of endemic fusaria inhabiting Sardinian soils (Tyrrhenian Islands)

Balmas, V., Migheli, Q., Scherm, B., Garau, P., O'Donnell, K., Ceccherelli, G., Kang, S. & Geiser, D. M., Jul 1 2010, In : Mycologia. 102, 4, p. 803-812 10 p.

Research output: Contribution to journalArticle

species complex
Islands
Haplotypes
haplotypes
Soil
2009
164 Citations (Scopus)

A two-locus DNA sequence database for typing plant and human pathogens within the Fusarium oxysporum species complex

O'Donnell, K., Gueidan, C., Sink, S., Johnston, P. R., Crous, P. W., Glenn, A., Riley, R., Zitomer, N. C., Colyer, P., Waalwijk, C., Lee, T. V. D., Moretti, A., Kang, S., Kim, H. S., Geiser, D. M., Juba, J. H., Baayen, R. P., Cromey, M. G., Bithell, S., Sutton, D. A. & 6 others, Skovgaard, K., Ploetz, R., Corby Kistler, H., Elliott, M., Davis, M. & Sarver, B. A. J., Dec 1 2009, In : Fungal Genetics and Biology. 46, 12, p. 936-948 13 p.

Research output: Contribution to journalArticle

Peptide Elongation Factor 1
Nucleic Acid Databases
Fusarium
Ribosomal DNA
Fumonisins
30 Citations (Scopus)

Multilocus phylogenetic diversity of Fusarium avenaceum pathogenic on lisianthus

Nalim, F. A., Elmer, W. H., McGovern, R. J. & Geiser, D. M., Apr 1 2009, In : PHYTOPATHOLOGY. 99, 4, p. 462-468 7 p.

Research output: Contribution to journalArticle

Fusarium avenaceum
phylogeny
tubulin
intergenic DNA
translation (genetics)
129 Citations (Scopus)

Novel multilocus sequence typing scheme reveals high genetic diversity of human pathogenic members of the Fusarium incarnatum-F. equiseti and F. chlamydosporum species complexes within the United States

O'Donnell, K., Sutton, D. A., Rinaldi, M. G., Gueidan, C., Crous, P. W. & Geiser, D. M., Dec 1 2009, In : Journal of clinical microbiology. 47, 12, p. 3851-3861 11 p.

Research output: Contribution to journalArticle

Multilocus Sequence Typing
Fusarium
DNA Fingerprinting
Tubulin
DNA Sequence Analysis
39 Citations (Scopus)

Sexual structures in Aspergillus: Morphology, importance and genomics

Geiser, D. M., Aug 17 2009, In : Medical Mycology. 47, SUPPL. 1

Research output: Contribution to journalArticle

teleomorphs
Aspergillus
Genomics
genomics
Spores
61 Citations (Scopus)

Taxonomy and phylogeny of the Fusarium dimerum species group

Schroers, H. J., O'Donnell, K., Lamprecht, S. C., Kammeyer, P. L., Johnson, S., Sutton, D. A., Rinaldi, M. G., Geiser, D. M. & Summerbell, R. C., Jan 1 2009, In : Mycologia. 101, 1, p. 44-70 27 p.

Research output: Contribution to journalArticle

Fusarium
Phylogeny
phylogeny
taxonomy
cactus
363 Citations (Scopus)

The ascomycota tree of life: A phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits

Schoch, C. L., Sung, G. H., López-Giráldez, F., Townsend, J. P., Miadlikowska, J., Hofstetter, V., Robbertse, B., Matheny, P. B., Kauff, F., Wang, Z., Gueidan, C., Andrie, R. M., Trippe, K., Ciufetti, L. M., Wynns, A., Fraker, E., Hodkinson, B. P., Bonito, G., Groenewald, J. Z., Arzanlou, M. & 44 others, Sybren De Hoog, G., Crous, P. W., Hewitt, D., Pfister, D. H., Peterson, K., Gryzenhout, M., Wingfield, M. J., Aptroot, A., Suh, S. O., Blackwell, M., Hillis, D. M., Griffith, G. W., Castlebury, L. A., Rossman, A. Y., Lumbsch, H. T., Lücking, R., Büdel, B., Rauhut, A., Diederich, P., Ertz, D., Geiser, D. M., Hosaka, K., Inderbitzin, P., Kohlmeyer, J., Volkmann-Kohlmeyer, B., Mostert, L., O'Donnell, K., Sipman, H., Rogers, J. D., Shoemaker, R. A., Sugiyama, J., Summerbell, R. C., Untereiner, W., Johnston, P. R., Stenroos, S., Zuccaro, A., Dyer, P. S., Crittenden, P. D., Cole, M. S., Hansen, K., Trappe, J. M., Yahr, R., Lutzoni, F. & Spatafora, J. W., Apr 1 2009, In : Systematic Biology. 58, 2, p. 224-239 16 p.

Research output: Contribution to journalArticle

Ascomycota
Phylogeny
phylogeny
fruiting bodies
Pezizomycotina
247 Citations (Scopus)

The genome of Nectria haematococca: Contribution of supernumerary chromosomes to gene expansion

Coleman, J. J., Rounsley, S. D., Rodriguez-Carres, M., Kuo, A., Wasmann, C. C., Grimwood, J., Schmutz, J., Taga, M., White, G. J., Zhou, S., Schwartz, D. C., Freitag, M., Ma, L. J., Danchin, E. G. J., Henrissat, B., Coutinho, P. M., Nelson, D. R., Straney, D., Napoli, C. A., Barker, B. M. & 19 others, Gribskov, M., Rep, M., Kroken, S., Molnár, I., Rensing, C., Kennell, J. C., Zamora, J., Farman, M. L., Selker, E. U., Salamov, A., Shapiro, H., Pangilinan, J., Lindquist, E., Lamers, C., Grigoriev, I. V., Geiser, D. M., Covert, S. F., Temporini, E. & Vanetten, H. D., Aug 1 2009, In : PLoS genetics. 5, 8, e1000618.

Research output: Contribution to journalArticle

Nectria
Fusarium eumartii
chromosome
genome
Chromosomes
2008
289 Citations (Scopus)

A multi-locus phylogeny for Phytophthora utilizing markers derived from complete genome sequences

Blair, J. E., Coffey, M. D., Park, S. Y., Geiser, D. M. & Kang, S., Mar 1 2008, In : Fungal Genetics and Biology. 45, 3, p. 266-277 12 p.

Research output: Contribution to journalArticle

Phytophthora
Phylogeny
Genome
Genomics
Genetic Markers
286 Citations (Scopus)

An adaptive evolutionary shift in Fusarium head blight pathogen populations is driving the rapid spread of more toxigenic Fusarium graminearum in North America

Ward, T. J., Clear, R. M., Rooney, A. P., O'Donnell, K., Gaba, D., Patrick, S., Starkey, D. E., Gilbert, J., Geiser, D. M. & Nowicki, T. W., Apr 1 2008, In : Fungal Genetics and Biology. 45, 4, p. 473-484 12 p.

Research output: Contribution to journalArticle

Fusarium
Trichothecenes
North America
Population
Canada
231 Citations (Scopus)

Molecular phylogenetic diversity, multilocus haplotype nomenclature, and in vitro antifungal resistance within the Fusarium solani Species complex

O'Donnell, K., Sutton, D. A., Fothergill, A., McCarthy, D., Rinaldi, M. G., Brandt, M. E., Zhang, N. & Geiser, D. M., Aug 1 2008, In : Journal of clinical microbiology. 46, 8, p. 2477-2490 14 p.

Research output: Contribution to journalArticle

Fusarium
Terminology
Haplotypes
Peptide Elongation Factor 1
Genes
41 Citations (Scopus)

Phytophthora database: A forensic database supporting the identification and monitoring of phytophthora

Park, J., Park, B., Veeraraghavan, N., Jung, K., Lee, Y. H., Blair, J. E., Geiser, D. M., Isard, S. A., Mansfield, M. A., Nikolaeva, E., Park, S. Y., Russo, J., Kim, S. H., Greene, M., Ivors, K. L., Balci, Y., Peiman, M., Erwin, D. C., Coffey, M. D., Rossman, A. & 9 others, Farr, D., Cline, E., Grünwald, N. J., Luster, D. G., Schrandt, J., Martin, F., Ribeiro, O. K., Makalowska, I. & Kang, S., Jun 1 2008, In : Plant disease. 92, 6, p. 966-972 7 p.

Research output: Contribution to journalArticle

Phytophthora
monitoring
forensic sciences
risk assessment
gels
2007
1322 Citations (Scopus)

A higher-level phylogenetic classification of the Fungi

Hibbett, D. S., Binder, M., Bischoff, J. F., Blackwell, M., Cannon, P. F., Eriksson, O. E., Huhndorf, S., James, T., Kirk, P. M., Lücking, R., Thorsten Lumbsch, H., Lutzoni, F., Matheny, P. B., McLaughlin, D. J., Powell, M. J., Redhead, S., Schoch, C. L., Spatafora, J. W., Stalpers, J. A., Vilgalys, R. & 47 others, Aime, M. C., Aptroot, A., Bauer, R., Begerow, D., Benny, G. L., Castlebury, L. A., Crous, P. W., Dai, Y. C., Gams, W., Geiser, D. M., Griffith, G. W., Gueidan, C., Hawksworth, D. L., Hestmark, G., Hosaka, K., Humber, R. A., Hyde, K. D., Ironside, J. E., Kõljalg, U., Kurtzman, C. P., Larsson, K. H., Lichtwardt, R., Longcore, J., Miadlikowska, J., Miller, A., Moncalvo, J. M., Mozley-Standridge, S., Oberwinkler, F., Parmasto, E., Reeb, V., Rogers, J. D., Roux, C., Ryvarden, L., Sampaio, J. P., Schüßler, A., Sugiyama, J., Thorn, R. G., Tibell, L., Untereiner, W. A., Walker, C., Wang, Z., Weir, A., Weiss, M., White, M. M., Winka, K., Yao, Y. J. & Zhang, N., May 1 2007, In : Mycological Research. 111, 5, p. 509-547 39 p.

Research output: Contribution to journalArticle

Chytridiomycota
Neocallimastigales
Neocallimastigomycota
Dikarya
Fungi
1077 Citations (Scopus)

A metagenomic survey of microbes in honey bee colony collapse disorder

Cox-foster, D. L., Conlan, S., Holmes, E. C., Palacios, G., Evans, J. D., Moran, N. A., Quan, P. L., Briese, T., Hornig, M., Geiser, D. M., Martinson, V., VanEngelsdorp, D., Kalkstein, A. L., Drysdale, A., Hui, J., Zhai, J., Cui, L., Hutchison, S. K., Simons, J. F., Egholm, M. & 2 others, Pettis, J. S. & Lipkin, W. I., Oct 12 2007, In : Science. 318, 5848, p. 283-287 5 p.

Research output: Contribution to journalArticle

Colony Collapse
Metagenomics
Honey
Bees
Urticaria
273 Citations (Scopus)

Global molecular surveillance reveals novel Fusarium head blight species and trichothecene toxin diversity

Starkey, D. E., Ward, T. J., Aoki, T., Gale, L. R., Kistler, H. C., Geiser, D. M., Suga, H., Tóth, B., Varga, J. & O'Donnell, K., Nov 1 2007, In : Fungal Genetics and Biology. 44, 11, p. 1191-1204 14 p.

Research output: Contribution to journalArticle

Trichothecenes
Fusarium
Multilocus Sequence Typing
South Africa
DNA Sequence Analysis
26 Citations (Scopus)

Macroarray detection of solanaceous plant pathogens in the Fusarium solani species complex

Zhang, N., Geiser, D. M. & Smart, C. D., Dec 1 2007, In : Plant disease. 91, 12, p. 1612-1620 9 p.

Research output: Contribution to journalArticle

Fusarium solani
oligonucleotides
plant pathogens
melting point
greenhouse experimentation
161 Citations (Scopus)

Phylogenetic diversity and microsphere array-based genotyping of human pathogenic fusaria, including isolates from the multistate contact lens-associated U.S. keratitis outbreaks of 2005 and 2006

O'Donnell, K., Sarver, B. A. J., Brandt, M., Chang, D. C., Noble-Wang, J., Park, B. J., Sutton, D. A., Benjamin, L., Lindsley, M., Padhye, A., Geiser, D. M. & Ward, T. J., Jul 1 2007, In : Journal of clinical microbiology. 45, 7, p. 2235-2248 14 p.

Research output: Contribution to journalArticle

Keratitis
Contact Lenses
Fusarium
Microspheres
Disease Outbreaks