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1978 …2019
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Research Output 1978 2019

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2019

Factoring Ecological, Societal, and Economic Considerations into Inoculant Development

Bell, T. H., Kaminsky, L. M., Gugino, B. K., Carlson, J. E., Malik, R. J., Hockett, K. L. & Trexler, R. V., Jun 2019, In : Trends in Biotechnology. 37, 6, p. 572-573 2 p.

Research output: Contribution to journalArticle

Agriculture
Agricultural Inoculants
Economics
Technology
Creativity

Manipulating Wild and Tamed Phytobiomes: Challenges and Opportunities

Bell, T. H., Hockett, K., Alcalá-Briseño, R. I., Barbercheck, M., Beattie, G. A., Bruns, M. A., Carlson, J., Chung, T., Collins, A., Emmett, B., Esker, P., Garrett, K., Glenna, L., Gugino, B. K., Jimenez Gasco, M. D. M., Kinkel, L., Kovac, J., Kowalski, K., Kuldau, G., Leveau, J. & 10 othersMichalska-Smith, M., Myrick, J., Peter, K., Salazar, M. V., Shade, A., Stopnisek, N., Tan, X., Welty, A., Wickings, K. & Yergeau, E., Mar 13 2019, In : Phytobiomes Journal.

Research output: Contribution to journalArticle

NaCl-induced CsRCI2E and CsRCI2F interact with aquaporin CsPIP2;1 to reduce water transport in Camelina sativa L.

Kim, H. S., Park, W., Lim, H. G., Eom, S., Lee, J. H., Carlson, J. E. & Ahn, S. J., May 21 2019, In : Biochemical and Biophysical Research Communications. 513, 1, p. 213-218 6 p.

Research output: Contribution to journalArticle

Aquaporin 1
Water
Proteins
Blood Proteins
Membrane Proteins

Neutral Genetic and Phenotypic Variation within and among Isolated Headwater Populations of Brook Trout

Weathers, T. C., Kazyak, D. C., Stauffer, Jr., J. R., Kulp, M. A., Moore, S. E., King, T. L. & Carlson, J. E., Jan 1 2019, In : Transactions of the American Fisheries Society. 148, 1, p. 58-72 15 p.

Research output: Contribution to journalArticle

Salvelinus fontinalis
isolated population
phenotypic variation
headwater
fixation

The first genetic linkage map for Fraxinus pennsylvanica and syntenic relationships with four related species

Wu, D., Koch, J., Coggeshall, M. & Carlson, J. E., Feb 1 2019, In : Plant molecular biology. 99, 3, p. 251-264 14 p.

Research output: Contribution to journalArticle

Fraxinus
Fraxinus pennsylvanica
Genetic Linkage
Coffee
chromosome mapping
2018

Host-plant induced changes in microbial community structure and midgut gene expression in an invasive polyphage (Anoplophora glabripennis

Scully, E. D., Geib, S. M., Mason, C. J., Carlson, J. E., Tien, M., Chen, H. Y., Harding, S., Tsai, C. J. & Hoover, K., Dec 1 2018, In : Scientific reports. 8, 1, 9620.

Research output: Contribution to journalArticle

Anoplophora glabripennis
midgut
microbial communities
Populus nigra
community structure
2017
5 Citations (Scopus)

Construction of a Framework Genetic Linkage Map in Gleditsia triacanthos L

Gailing, O., Staton, M. E., Lane, T., Schlarbaum, S. E., Nipper, R., Owusu, S. A. & Carlson, J. E., Apr 1 2017, In : Plant Molecular Biology Reporter. 35, 2, p. 177-187 11 p.

Research output: Contribution to journalArticle

Gleditsia
Gleditsia triacanthos
Genetic Linkage
Grasshoppers
Honey
1 Citation (Scopus)

Development of genic and genomic microsatellites in Gleditsia triacanthos L. (Fabaceae) using illumina sequencing

Wu, Y., Zhang, R., Staton, M., Schlarbaum, S. E., Coggeshall, M. V., Romero-Severson, J., Carlson, J. E., Zembower, N., Liang, H., Xu, Y., Drautz-Moses, D. I., Schuster, S. C. & Gailing, O., Jan 1 2017, In : Annals of Forest Research. 60, 2, p. 343-350 8 p.

Research output: Contribution to journalArticle

Gleditsia triacanthos
Fabaceae
genomics
microsatellite repeats
gene flow
1 Citation (Scopus)

Development of novel genic microsatellite markers from transcriptome sequencing in sugar maple (Acer saccharum Marsh.)

Harmon, M., Lane, T., Staton, M., Coggeshall, M. V., Best, T., Chen, C. C., Liang, H., Zembower, N., Drautz-Moses, D. I., Hwee, Y. Z., Schuster, S. C., Schlarbaum, S. E., Carlson, J. E. & Gailing, O., Aug 8 2017, In : BMC Research Notes. 10, 1, 369.

Research output: Contribution to journalArticle

Acer
Wetlands
Transcriptome
Sugars
Microsatellite Repeats
1 Citation (Scopus)

Genome-wide association study identifies a major gene for beech bark disease resistance in American beech (Fagus grandifolia Ehrh.)

Čalić, I., Koch, J., Carey, D., Addo-Quaye, C., Carlson, J. E. & Neale, D. B., Jul 20 2017, In : BMC genomics. 18, 1, 547.

Research output: Contribution to journalArticle

Fagus
Disease Resistance
Genome-Wide Association Study
Genes
Single Nucleotide Polymorphism
3 Citations (Scopus)

High-quality genetic mapping with ddRADseq in the non-model tree Quercus rubra

Konar, A., Choudhury, O., Bullis, R., Fiedler, L., Kruser, J. M., Stephens, M. T., Gailing, O., Schlarbaum, S., Coggeshall, M. V., Staton, M. E., Carlson, J. E., Emrich, S. & Romero-Severson, J., May 30 2017, In : BMC genomics. 18, 1, 417.

Research output: Contribution to journalArticle

Quercus
Single Nucleotide Polymorphism
Genome
Genetic Linkage
Chromosome Mapping
2016
6 Citations (Scopus)

Genome sequence of fusarium isolate MYA-4552 from the midgut of Anoplophora glabripennis, an invasive, wood-boring beetle

Herr, J. R., Scully, E. D., Geib, S. M., Hoover, K., Carlson, J. E. & Geiser, D. M., Jan 1 2016, In : Genome Announcements. 4, 4, e00544-16.

Research output: Contribution to journalArticle

Beetles
Fusarium
Genome
Insects
Fungi
3 Citations (Scopus)

Pollen gene flow and molecular identification of full-sib families in small and isolated population fragments of Gleditsia triacanthos L

Owusu, S. A., Schlarbaum, S. E., Carlson, J. E. & Gailing, O., Mar 28 2016, In : Botany. 94, 7, p. 523-532 10 p.

Research output: Contribution to journalArticle

Gleditsia triacanthos
isolated population
gene flow
pollen flow
pollen
6 Citations (Scopus)

The green ash transcriptome and identification of genes responding to abiotic and biotic stresses

Lane, T., Best, T., Zembower, N., Davitt, J., Henry, N., Xu, Y., Koch, J., Liang, H., McGraw, J., Schuster, S., Shim, D., Coggeshall, M. V., Carlson, J. E. & Staton, M. E., Sep 2 2016, In : BMC genomics. 17, 1, 702.

Research output: Contribution to journalArticle

Transcriptome
Fraxinus
Genes
Climate Change
Genetic Markers
2015
6 Citations (Scopus)

Characterization of the transcriptome of the xerophyte ammopiptanthus mongolicus leaves under drought stress by 454 pyrosequencing

Pang, T., Guo, L., Shim, D., Cannon, N., Tang, S., Chen, J., Xia, X., Yin, W. & Carlson, J. E., Aug 27 2015, In : PloS one. 10, 8, e0136495.

Research output: Contribution to journalArticle

Drought
Droughts
Transcriptome
transcriptome
water stress
4 Citations (Scopus)

Identification of terminal flowering1 (TFL1) genes associated with the teak (Tectona grandis) floral development regulation using RNA-seq

Diningrat, D. S., Widiyanto, S. M., Pancoro, A., Iriawati, Shim, D., Panchangam, B., Zembower, N. & Carlson, J. E., Jan 1 2015, In : Research Journal of Botany. 10, 1, p. 1-13 13 p.

Research output: Contribution to journalArticle

Tectona grandis
RNA
flowering
gene
genes
5 Citations (Scopus)

Nuclear microsatellite markers for population genetic studies in sugar maple (Acer saccharum Marsh.)

Khodwekar, S., Staton, M., Coggeshall, M. V., Carlson, J. E. & Gailing, O., Jan 1 2015, In : Annals of Forest Research. 58, 2, p. 193-204 12 p.

Research output: Contribution to journalArticle

Acer saccharum
Acer saccharum subsp. saccharum
pollen flow
population genetics
marshes
12 Citations (Scopus)

Preliminary Genomic Characterization of Ten Hardwood Tree Species from Multiplexed Low Coverage Whole Genome Sequencing

Staton, M., Best, T., Khodwekar, S., Owusu, S., Xu, T., Xu, Y., Jennings, T., Cronn, R., Arumuganathan, A. K., Coggeshall, M., Gailing, O., Liang, H., Romero-Severson, J., Schlarbaum, S. & Carlson, J. E., Dec 1 2015, In : PloS one. 10, 12, e0145031.

Research output: Contribution to journalArticle

Hardwoods
hardwood
Genes
Genome
genomics
9 Citations (Scopus)

Substantial genome synteny preservation among woody angiosperm species: Comparative genomics of Chinese chestnut (Castanea mollissima) and plant reference genomes

Staton, M., Zhebentyayeva, T., Olukolu, B., Fang, G. C., Nelson, D., Carlson, J. E. & Abbott, A. G., Oct 5 2015, In : BMC Genomics. 16, 1, 744.

Research output: Contribution to journalArticle

Synteny
Plant Genome
Angiosperms
Genomics
Quantitative Trait Loci
5 Citations (Scopus)

Transcriptome of teak (Tectona grandis, l.f) in vegetative to generative stages development

Diningrat, D. S., Widiyanto, S. M., Pancoro, A., Iriawati, Shim, D., Panchangam, B., Zembower, N. & Carlson, J. E., Jan 1 2015, In : Journal of Plant Sciences. 10, 1, p. 1-14 14 p.

Research output: Contribution to journalArticle

Tectona grandis
transcriptome
Solanum lycopersicum
flowering
wood quality
2014
37 Citations (Scopus)
Digestive System Physiological Phenomena
Microbiota
Beetles
Genomics
Ecology
47 Citations (Scopus)

Genome and secretome analysis of the hemibiotrophic fungal pathogen, Moniliophthora roreri, which causes frosty pod rot disease of cacao: Mechanisms of the biotrophic and necrotrophic phases

Meinhardt, L. W., Costa, G. G. L., Thomazella, D. P. T., Teixeira, P. J. P. L., Carazzolle, M. F., Schuster, S. C., Carlson, J. E., Guiltinan, M., Mieczkowski, P., Farmer, A., Ramaraj, T., Crozier, J., Davis, R. E., Shao, J., Melnick, R. L., Pereira, G. A. G. & Bailey, B. A., Feb 27 2014, In : BMC genomics. 15, 1, 164.

Research output: Contribution to journalArticle

Cacao
Genome
RNA Sequence Analysis
Basidiomycota
Fungi
10 Citations (Scopus)
Aquaporin 1
Camelina
aquaporins
Droughts
salt stress
6 Citations (Scopus)

The forest health initiative, american chestnut (Castanea dentata) as a model for forest tree restoration: Biological research program

Nelson, C. D., Powell, W. A., Maynard, C. A., Baier, K. M., Newhouse, A., Merkle, S. A., Nairn, C. J., Kong, L., Carlson, J. E., Addo-Quaye, C., Staton, M. E., Hebard, F. V., Georgi, L. L., Abbott, A. G., Olukolu, B. A. & Zhebentyayeva, T., Dec 2 2014, In : Acta Horticulturae. 1019, p. 179-190 12 p.

Research output: Contribution to journalArticle

Castanea dentata
forest health
research programs
forest trees
blight
2013
20 Citations (Scopus)

A physical map of the Chinese chestnut (Castanea mollissima) genome and its integration with the genetic map

Fang, G. C., Blackmon, B. P., Staton, M. E., Nelson, C. D., Kubisiak, T. L., Olukolu, B. A., Henry, D., Zhebentyayeva, T., Saski, C. A., Cheng, C. H., Monsanto, M., Ficklin, S., Atkins, M., Georgi, L. L., Barakat, A., Wheeler, N., Carlson, J. E., Sederoff, R. & Abbott, A. G., Jan 1 2013, In : Tree Genetics and Genomes. 9, 2, p. 525-537 13 p.

Research output: Contribution to journalArticle

Castanea mollissima
Bacterial Artificial Chromosomes
physical chromosome mapping
genome
Genome
29 Citations (Scopus)

Cold stress causes rapid but differential changes in properties of plasma membrane H+-ATPase of camelina and rapeseed

Kim, H. S., Oh, J. M., Luan, S., Carlson, J. E. & Ahn, S. J., Feb 11 2013, In : Journal of Plant Physiology. 170, 9, p. 828-837 10 p.

Research output: Contribution to journalArticle

Camelina
Brassica rapa
H-transporting ATP synthase
Proton-Translocating ATPases
cold stress
17 Citations (Scopus)

Fagaceae trees as models to integrate ecology, evolution and genomics

Petit, R. J., Carlson, J. E., Curtu, A. L., Loustau, M. L., Plomion, C., González-Rodríguez, A., Sork, V. & Ducousso, A., Jan 1 2013, In : New Phytologist. 197, 2, p. 369-371 3 p.

Research output: Contribution to journalArticle

Ecological and Environmental Phenomena
Fagaceae
Biological Evolution
budburst
Physiological Adaptation
56 Citations (Scopus)

Metagenomic Profiling Reveals Lignocellulose Degrading System in a Microbial Community Associated with a Wood-Feeding Beetle

Scully, E. D., Geib, S. M., Hoover, K., Tien, M., Tringe, S. G., Barry, K. W., Glavina del Rio, T., Chovatia, M., Herr, J. R. & Carlson, J. E., Sep 4 2013, In : PloS one. 8, 9, e73827.

Research output: Contribution to journalArticle

Anoplophora glabripennis
Metagenome
Metagenomics
lignocellulose
Lignin
37 Citations (Scopus)

Midgut transcriptome profiling of Anoplophora glabripennis, a lignocellulose degrading cerambycid beetle

Scully, E. D., Hoover, K., Carlson, J. E., Tien, M. & Geib, S. M., Dec 4 2013, In : BMC genomics. 14, 1, 850.

Research output: Contribution to journalArticle

Beetles
Gene Expression Profiling
Glycoside Hydrolases
Enzymes
Lignin
49 Citations (Scopus)

Populus euphratica: The transcriptomic response to drought stress

Tang, S., Liang, H., Yan, D., Zhao, Y., Han, X., Carlson, J. E., Xia, X. & Yin, W., Dec 1 2013, In : Plant molecular biology. 83, 6, p. 539-557 19 p.

Research output: Contribution to journalArticle

Populus euphratica
Populus
Droughts
transcriptomics
water stress
13 Citations (Scopus)

Two aquaporins of Jatropha are regulated differentially during drought stress and subsequent recovery

Jang, H. Y., Yang, S. W., Carlson, J. E., Ku, Y. G. & Ahn, S. J., Jul 15 2013, In : Journal of Plant Physiology. 170, 11, p. 1028-1038 11 p.

Research output: Contribution to journalArticle

Jatropha
Aquaporins
aquaporins
Droughts
water stress
3 Citations (Scopus)

Wood chemistry analysis and expression profiling of a poplar clone expressing a tyrosine-rich peptide

Xu, Y., Chen, C. F., Thomas, T. P., Azadi, P., Diehl, B., Tsai, C. J., Brown, N., Carlson, J. E., Tien, M. & Liang, H., Dec 1 2013, In : Plant Cell Reports. 32, 12, p. 1827-1841 15 p.

Research output: Contribution to journalArticle

wood chemistry
tyrosine
peptides
clones
lignin
2012
8 Citations (Scopus)

A petiole-galling insect herbivore decelerates leaf lamina litter decomposition rates

Frost, C. J., Dean, J. M., Smyers, E. C., Mescher, M. C., Carlson, J. E., De Moraes, C. M. & Tooker, J. F., Jun 1 2012, In : Functional Ecology. 26, 3, p. 628-636 9 p.

Research output: Contribution to journalArticle

leaf litter
leaf blade
herbivore
herbivores
insect
41 Citations (Scopus)

Chestnut resistance to the blight disease: Insights from transcriptome analysis

Barakat, A., Staton, M., Cheng, C. H., Park, J., Yassin, N. B. M., Ficklin, S., Yeh, C. C., Hebard, F., Baier, K., Powell, W., Schuster, S. C., Wheeler, N., Abbott, A., Carlson, J. E. & Sederoff, R., Mar 19 2012, In : BMC Plant Biology. 12, 38.

Research output: Contribution to journalArticle

Castanea
transcriptomics
blight
Castanea dentata
Castanea mollissima
35 Citations (Scopus)

Overexpression of Constans Homologs CO1 and CO2 Fails to Alter Normal Reproductive Onset and Fall Bud Set in Woody Perennial Poplar

Hsu, C. Y., Adams, J. P., No, K., Liang, H., Meilan, R., Pechanova, O., Barakat, A., Carlson, J. E., Page, G. P. & Yuceer, C., Sep 19 2012, In : PloS one. 7, 9, e45448.

Research output: Contribution to journalArticle

Regulon
Arabidopsis
regulon
buds
flowering
13 Citations (Scopus)

Phylogenetic analysis of Fusarium solani associated with the Asian longhorned beetle, Anoplophora glabripennis

Geib, S. M., Scully, E. D., Jimenez Gasco, M. D. M., Carlson, J. E., Tien, M. & Hoover, K., Dec 1 2012, In : Insects. 3, 1, p. 141-160 20 p.

Research output: Contribution to journalArticle

Anoplophora glabripennis
Fusarium solani
phylogeny
digestive system
translation (genetics)
22 Citations (Scopus)

Proteomic analysis of fusarium solani isolated from the asian longhorned beetle, anoplophora glabripennis

Scully, E. D., Hoover, K., Carlson, J. E., Tien, M. & Geib, S. M., Apr 9 2012, In : PLoS One. 7, 4, e32990.

Research output: Contribution to journalArticle

Anoplophora glabripennis
Fusarium solani
Beetles
Fusarium
Proteomics
9 Citations (Scopus)

The mitochondrial genome of Moniliophthora roreri, the frosty pod rot pathogen of cacao

Costa, G. G. L., Cabrera, O. G., Tiburcio, R. A., Medrano, F. J., Carazzolle, M. F., Thomazella, D. P. T., Schuster, S. C., Carlson, J. E., Guiltinan, M., Bailey, B. A., Mieczkowski, P., Pereira, G. A. G. & Meinhardt, L. W., May 1 2012, In : Fungal Biology. 116, 5, p. 551-562 12 p.

Research output: Contribution to journalArticle

Moniliophthora roreri
Mitochondrial Genome
Cacao
Mitochondrial DNA
pods
2011
18 Citations (Scopus)

A physical map for the Amborella trichopoda genome sheds light on the evolution of angiosperm genome structure

Zuccolo, A., Bowers, J. E., Estill, J. C., Xiong, Z., Luo, M., Sebastian, A., Goicoechea, J. L., Collura, K., Yu, Y., Jiao, Y., Duarte, J., Tang, H., Ayyampalayam, S., Rounsley, S., Kudrna, D., Paterson, A. H., Pires, J. C., Chanderbali, A., Soltis, D. E., Chamala, S. & 11 othersBarbazuk, B., Soltis, P. S., Albert, V. A., Ma, H., Mandoli, D., Banks, J., Carlson, J. E., Tomkins, J., Depamphilis, C. W., Wing, R. A. & Leebens-Mack, J., May 27 2011, In : Genome biology. 12, 5, R48.

Research output: Contribution to journalArticle

Amborella trichopoda
Amborella
Angiosperms
physical chromosome mapping
angiosperm
10 Citations (Scopus)

A successful application of the embryo rescue technique as a model for studying crosses between Salix viminalis and Populus species

Bagniewska-Zadworna, A., Zenkteler, M., Zenkteler, E., Wojciechowicz, M. K., Barakat, A. & Carlson, J. E., Jun 29 2011, In : Australian Journal of Botany. 59, 4, p. 382-392 11 p.

Research output: Contribution to journalArticle

Salix viminalis
Populus
embryo (plant)
embryo
Populus alba
21 Citations (Scopus)

Comparative and phylogenomic analyses of cinnamoyl-CoA reductase and cinnamoyl-CoA-reductase-like gene family in land plants

Barakat, A., Yassin, N. B. M., Park, J. S., Choi, A., Herr, J. & Carlson, J. E., Sep 1 2011, In : Plant Science. 181, 3, p. 249-257 9 p.

Research output: Contribution to journalArticle

cinnamoyl CoA reductase
Embryophyta
embryophytes
Genes
genes
19 Citations (Scopus)

Comparative genomics and evolutionary analyses of the O-methyltransferase gene family in Populus

Barakat, A., Choi, A., Yassin, N. B. M., Park, J. S., Sun, Z. & Carlson, J. E., Jun 15 2011, In : Gene. 479, 1-2, p. 37-46 10 p.

Research output: Contribution to journalArticle

Populus
Methyltransferases
Genomics
Genes
Embryophyta
216 Citations (Scopus)

FLOWERING LOCUS T duplication coordinates reproductive and vegetative growth in perennial poplar

Hsu, C. Y., Adams, J. P., Kim, H., No, K., Ma, C., Strauss, S. H., Drnevich, J., Vandervelde, L., Ellis, J. D., Rice, B. M., Wickett, N., Gunter, L. E., Tuskan, G. A., Brunner, A. M., Page, G. P., Barakat, A., Carlson, J. E., Depamphilis, C. W., Luthe, D. S. & Yuceer, C., Jun 28 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 26, p. 10756-10761 6 p.

Research output: Contribution to journalArticle

Growth
Genome
Populus
Temperature
Meristem
4 Citations (Scopus)

Organization of the chromosome region harboring a FLORICAULA/LEAFY gene in Liriodendron

Liang, H., Barakat, A., Schlarbaum, S. E. & Carlson, J. E., Apr 1 2011, In : Tree Genetics and Genomes. 7, 2, p. 373-384 12 p.

Research output: Contribution to journalArticle

Liriodendron
Liriodendron tulipifera
chromosome
Chromosomes
chromosomes
352 Citations (Scopus)

The genome of Theobroma cacao

Argout, X., Salse, J., Aury, J. M., Guiltinan, M., Droc, G., Gouzy, J., Allegre, M., Chaparro, C., Legavre, T., Maximova, S., Abrouk, M., Murat, F., Fouet, O., Poulain, J., Ruiz, M., Roguet, Y., Rodier-Goud, M., Barbosa-Neto, J. F., Sabot, F., Kudrna, D. & 41 othersAmmiraju, J. S. S., Schuster, S. C., Carlson, J. E., Sallet, E., Schiex, T., Dievart, A., Kramer, M., Gelley, L., Shi, Z., Bérard, A., Viot, C., Boccara, M., Risterucci, A. M., Guignon, V., Sabau, X., Axtell, M., Ma, Z., Zhang, Y., Brown, S., Bourge, M., Golser, W., Song, X., Clement, D., Rivallan, R., Tahi, M., Akaza, J. M., Pitollat, B., Gramacho, K., D'Hont, A., Brunel, D., Infante, D., Kebe, I., Costet, P., Wing, R., McCombie, W. R., Guiderdoni, E., Quetier, F., Panaud, O., Wincker, P., Bocs, S. & Lanaud, C., Jan 1 2011, In : Nature Genetics. 43, 2, p. 101-108 8 p.

Research output: Contribution to journalArticle

Cacao
Genome
Chromosomes
Genes
Genome Size
2010
6 Citations (Scopus)

Comparison of gene order of GIGANTEA loci in yellow-poplar, monocots, and eudicots.

Liang, H., Barakat, A., Schlarbaum, S. E., Mandoli, D. F. & Carlson, J. E., Jul 1 2010, In : Genome / National Research Council Canada = Génome / Conseil national de recherches Canada. 53, 7, p. 533-544 12 p.

Research output: Contribution to journalArticle

Liriodendron
Gene Order
Angiosperms
Genome
Bacterial Artificial Chromosomes
27 Citations (Scopus)

Genes acquired by horizontal transfer are potentially involved in the evolution of phytopathogenicity in moniliophthora perniciosa and moniliophthora roreri, two of the major pathogens of cacao

Tiburcio, R. A., Costa, G. G. L., Carazzolle, M. F., Mondego, J. M. C., Schuster, S. C., Carlson, J. E., Guiltinan, M., Bailey, B. A., Mieczkowski, P., Meinhardt, L. W. & Pereira, G. A. G., Jan 1 2010, In : Journal of Molecular Evolution. 70, 1, p. 85-97 13 p.

Research output: Contribution to journalArticle

Moniliophthora roreri
Moniliophthora perniciosa
Moniliophthora
Horizontal Gene Transfer
Cacao
41 Citations (Scopus)
cinnamyl alcohol dehydrogenase
Populus nigra
Populus deltoides
Populus
herbivores
9 Citations (Scopus)

Shotgun proteomic analysis of yeast-elicited California poppy (Eschscholzia californica) suspension cultures producing enhanced levels of benzophenanthridine alkaloids

Oldham, J. T., Hincapie, M., Rejtar, T., Wall, P. K., Carlson, J. E. & Lee-Parsons, C. W. T., Sep 3 2010, In : Journal of Proteome Research. 9, 9, p. 4337-4345 9 p.

Research output: Contribution to journalArticle

Eschscholzia
Benzophenanthridines
Firearms
Alkaloids
Proteomics
2009
154 Citations (Scopus)

Comparison of next generation sequencing technologies for transcriptome characterization

Wall, P. K., Leebens-Mack, J., Chanderbali, A. S., Barakat, A., Wolcott, E., Liang, H., Sheaffer, L. L., Tomsho, L. P., Hu, Y., Carlson, J. E., Ma, H., Schuster, S. C., Soltis, D. E., Soltis, P. S., Altman, N. S. & Depamphilis, C. W., Aug 1 2009, In : BMC genomics. 10, 347.

Research output: Contribution to journalArticle

Eschscholzia
Transcriptome
Arabidopsis
Persea
Untranslated Regions