Marta Hoover

  • Assistant Research Professor, Biology
    • 98 Citations
    • 5 h-Index
    20092019

    Research output per year

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    Research Output

    • 98 Citations
    • 5 h-Index
    • 10 Article
    • 1 Chapter
    • 1 Review article
    2019

    DiscoverY: A classifier for identifying y chromosome sequences in male assemblies

    Rangavittal, S., Stopa, N., Tomaszkiewicz, M., Sahlin, K., Makova, K. D. & Medvedev, P., Aug 9 2019, In : BMC genomics. 20, 1, 641.

    Research output: Contribution to journalArticle

    Open Access
    1 Scopus citations

    Dosage regulation, and variation in gene expression and copy number of human Y chromosome ampliconic genes

    Vegesna, R., Tomaszkiewicz, M., Medvedev, P. & Makova, K. D., Jan 1 2019, In : PLoS genetics. 15, 9, e1008369.

    Research output: Contribution to journalArticle

    Open Access
    2018

    Deciphering highly similar multigene family transcripts from Iso-Seq data with IsoCon

    Sahlin, K., Tomaszkiewicz, M., Makova, K. D. & Medvedev, P., Dec 1 2018, In : Nature communications. 9, 1, 4601.

    Research output: Contribution to journalArticle

    7 Scopus citations

    High levels of copy number variation of ampliconic genes across major human Y haplogroups

    Ye, D., Zaidi, A. A., Tomaszkiewicz, M., Anthony, K., Liebowitz, C., DeGiorgio, M., Shriver, M. D. & Makova, K. D., May 1 2018, In : Genome biology and evolution. 10, 5, p. 1333-1350 18 p.

    Research output: Contribution to journalArticle

    5 Scopus citations

    RecoverY: K-mer-based read classification for Y-chromosome-specific sequencing and assembly

    Rangavittal, S., Harris, R. S., Cechova, M., Tomaszkiewicz, M., Chikhi, R., Makova, K. D. & Medvedev, P., Apr 1 2018, In : Bioinformatics. 34, 7, p. 1125-1131 7 p.

    Research output: Contribution to journalArticle

    5 Scopus citations
    2017

    Y and W Chromosome Assemblies: Approaches and Discoveries

    Tomaszkiewicz, M., Medvedev, P. & Makova, K. D., Apr 1 2017, In : Trends in Genetics. 33, 4, p. 266-282 17 p.

    Research output: Contribution to journalReview article

    21 Scopus citations
    2016

    A time- and cost-effective strategy to sequence mammalian Y chromosomes: An application to the de novo assembly of gorilla Y

    Tomaszkiewicz, M., Rangavittal, S., Cechova, M., Sanchez, R. C., Fescemyer, H. W., Harris, R., Ye, D., O'Brien, P. C. M., Chikhi, R., Ryder, O. A., Ferguson-Smith, M. A., Medvedev, P. & Makova, K. D., Apr 2016, In : Genome research. 26, 4, p. 530-540 11 p.

    Research output: Contribution to journalArticle

    42 Scopus citations

    Reverse Transcription Errors and RNA-DNA Differences at Short Tandem Repeats

    Fungtammasan, A., Tomaszkiewicz, M., Campos-Sánchez, R., Eckert, K. A., Degiorgio, M. & Makova, K. D., Oct 1 2016, In : Molecular biology and evolution. 33, 10, p. 2744-2758 15 p.

    Research output: Contribution to journalArticle

    3 Scopus citations
    2014

    A multicopy Y-chromosomal SGNH hydrolase gene expressed in the testis of the platyfish has been captured and mobilized by a Helitron transposon

    Tomaszkiewicz, M., Chalopin, D., Schartl, M., Galiana, D. & Volff, J. N., Apr 8 2014, In : BMC Genetics. 15, 44.

    Research output: Contribution to journalArticle

    Open Access
    5 Scopus citations
    2012

    LTR retroelement-derived protein-coding genes and vertebrate evolution

    Chalopin, D., Hoover, M., Galiana, D. & Volff, J. N., Nov 1 2012, Viruses: Essential Agents of Life. Springer Netherlands, Vol. 9789400748996. p. 269-282 14 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

    2 Scopus citations
    2010

    Heterogamety in the baltic glacial relict Saduria entomon (Isopoda: Valvifera)

    Tomaszkiewicz, M., Smolarz, K. & Wołowicz, M., Nov 1 2010, In : Journal of Crustacean Biology. 30, 4, p. 757-761 5 p.

    Research output: Contribution to journalArticle

    Open Access
    2 Scopus citations
    2009

    Molecular analysis of the sex chromosomes of the platyfish Xiphophorus maculatus: Towards the identification of a new type of master sexual regulator in vertebrates.

    Böhne, A., Schultheis, C., Galiana-Arnoux, D., Froschauer, A., Zhou, Q., Schmidt, C., Selz, Y., Ozouf-Costaz, C., Dettai, A., Segurens, B., Couloux, A., Bernard-Samain, S., Barbe, V., Chilmonczyk, S., Brunet, F., Darras, A., Tomaszkiewicz, M., Semon, M., Schartl, M. & Volff, J. N., Sep 1 2009, In : Integrative zoology. 4, 3, p. 277-284 8 p.

    Research output: Contribution to journalArticle

    Open Access
    5 Scopus citations