Projects per year
Fingerprint Fingerprint is based on mining the text of the experts' scientific documents to create an index of weighted terms, which defines the key subjects of each individual researcher.
Encyclopedias
Medicine & Life Sciences
Reproducibility
Mathematics
Chromatin Immunoprecipitation
Medicine & Life Sciences
Genome
Medicine & Life Sciences
Genes
Engineering & Materials Science
High Throughput
Mathematics
Mass Spectrometry
Mathematics
Human Genome
Medicine & Life Sciences
Network
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Projects 2013 2023
- 1 Active
Statistical methods for improving reproducibility and utility of sequencing data
9/1/13 → 3/31/23
Project: Research project
Statistical methods
RNA
Assays
Histones
Design of experiments
Research Output 2005 2019
Measuring the reproducibility and quality of Hi-C data
Yardımcı, G. G., Ozadam, H., Sauria, M. E. G., Ursu, O., Yan, K. K., Yang, T., Chakraborty, A., Kaul, A., Lajoie, B. R., Song, F., Zhan, Y., Ay, F., Gerstein, M., Kundaje, A., Li, Q., Taylor, J., Yue, F., Dekker, J. & Noble, W. S., Mar 19 2019, In : Genome biology. 20, 1, 57.Research output: Contribution to journal › Article
reproducibility
Noise
Benchmarking
DNA Replication
Practice Guidelines
A regression framework for assessing covariate effects on the reproducibility of high-throughput experiments
Li, Q. & Zhang, F., Sep 1 2018, In : Biometrics. 74, 3, p. 803-813 11 p.Research output: Contribution to journal › Article
Reproducibility
reproducibility
High Throughput
Covariates
Regression
Condition-adaptive fused graphical lasso (CFGL): An adaptive procedure for inferring condition-specific gene co-expression network
Lyu, Y., Xue, L., Zhang, F., Koch, H., Saba, L., Kechris, K. & Li, Q., Sep 1 2018, In : PLoS computational biology. 14, 9, e1006436.Research output: Contribution to journal › Article
Adaptive Procedure
Lasso
Genes
Gene
cancer
Maximum Rank Reproducibility: A Nonparametric Approach to Assessing Reproducibility in Replicate Experiments
Philtron, D. L., Lyu, Y., Li, Q. & Ghosh, D., Jul 3 2018, In : Journal of the American Statistical Association. 113, 523, p. 1028-1039 12 p.Research output: Contribution to journal › Article
Reproducibility
Experiment
Quality Control
Sequencing
Rank Statistics
powerTCR: A model-based approach to comparative analysis of the clone size distribution of the T cell receptor repertoire
Koch, H., Starenki, D., Cooper, S. J., Myers, R. M. & Li, Q., Nov 1 2018, In : PLoS computational biology. 14, 11, e1006571.Research output: Contribution to journal › Article
T-cells
T-Cell Antigen Receptor
Comparative Analysis
Clone
Receptor