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Shaun A. Mahony, PhD

    • 2224 Citations
    • 22 h-Index
    20032019
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    Fingerprint Dive into the research topics where Shaun A. Mahony is active. These topic labels come from the works of this person. Together they form a unique fingerprint.

    • 2 Similar Profiles
    Transcription Factors Medicine & Life Sciences
    Genome Medicine & Life Sciences
    Motor Neurons Medicine & Life Sciences
    Nucleotide Motifs Medicine & Life Sciences
    Transcription Factor Mathematics
    Chromatin Immunoprecipitation Medicine & Life Sciences
    Chromatin Medicine & Life Sciences
    Genes Medicine & Life Sciences

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    Research Output 2003 2019

    Characterizing protein-DNA binding event subtypes in ChIP-exo data

    Yamada, N., Lai, W., Farrell, N., Pugh, B. F. & Mahony, S. A., Mar 15 2019, In : Bioinformatics. 35, 6, p. 903-913 11 p.

    Research output: Contribution to journal › Article

    DNA-binding Protein
    Chromatin Immunoprecipitation
    Chromatin
    DNA-Binding Proteins
    DNA

    Joint inference and alignment of genome structures enables characterization of compartment-independent reorganization across cell types

    Rieber, L. & Mahony, S., Oct 8 2019, In : Epigenetics and Chromatin. 12, 1, 61.

    Research output: Contribution to journal › Article

    Open Access
    Joints
    Genome
    Histone Code
    K562 Cells
    Datasets
    3 Citations (Scopus)

    Proneural factors Ascl1 and Neurog2 contribute to neuronal subtype identities by establishing distinct chromatin landscapes

    Aydin, B., Kakumanu, A., Rossillo, M., Moreno-Estellés, M., Garipler, G., Ringstad, N., Flames, N., Mahony, S. A. & Mazzoni, E. O., Jun 1 2019, In : Nature Neuroscience. 22, 6, p. 897-908 12 p.

    Research output: Contribution to journal › Article

    Chromatin
    Transcription Factors
    E-Box Elements
    Embryonic Stem Cells
    Nervous System

    Characterizing protein-DNA binding event subtypes in CHIP-exo data

    Yamada, N., Lai, W., Farrell, N., Pugh, B. F. & Mahony, S. A., Jan 1 2018, Research in Computational Molecular Biology - 22nd Annual International Conference, RECOMB 2018, Proceedings. Springer Verlag, p. 291-292 2 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10812 LNBI).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    DNA-binding Protein
    DNA
    Proteins
    7 Citations (Scopus)

    Widespread and precise reprogramming of yeast protein-genome interactions in response to heat shock

    Vinayachandran, V., Reja, R., Rossi, M., Park, B., Rieber, L., Mittal, C., Mahony, S. A. & Pugh, B. F., Mar 1 2018, In : Genome research. 28, 3, p. 357-366 10 p.

    Research output: Contribution to journal › Article

    Heat-Shock Response
    Fungal Proteins
    Genome
    Shock
    Nucleosomes