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Shaun A. Mahony, PhD

    • 2411 Citations
    • 23 h-Index
    20032020

    Research output per year

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    Projects

    A 2D segmentation method for jointly characterizing epigenetic dynamics in multiple cell lines

    Mahony, S. A.

    National Institute of General Medical Sciences

    8/1/18 → 7/31/19

    Project: Research project

    • Genome-wide structural organization of proteins within human gene regulatory complexes

    Mahony, S. A. & PUGH, F.

    National Institute of General Medical Sciences

    1/19/18 → 12/31/18

    Project: Research project

    • Research Output

    An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis

    Xiang, G., Keller, C. A., Heuston, E., Giardine, B. M., An, L., Wixom, A. Q., Miller, A., Cockburn, A., Sauria, M. E. G., Weaver, K., Lichtenberg, J., Göttgens, B., Li, Q., Bodine, D., Mahony, S., Taylor, J., Blobel, G. A., Weiss, M. J., Cheng, Y., Yue, F. & 4 others, Hughes, J., Higgs, D. R., Zhang, Y. & Hardison, R. C., 2020, In : Genome research. 30, 3, p. 472-484 13 p.

    Research output: Contribution to journal › Article

    Open Access

    • Assessing relationships between chromatin interactions and regulatory genomic activities using the self-organizing map

    Kunz, T., Rieber, L. & Mahony, S., Jul 9 2020, In : Methods.

    Research output: Contribution to journal › Article

    • ChExMix: A Method for Identifying and Classifying Protein-DNA Interaction Subtypes

    Yamada, N., Kuntala, P. K., Pugh, B. F. & Mahony, S., Mar 2020, In : Journal of Computational Biology. 27, 3, p. 429-435 7 p.

    Research output: Contribution to journal › Article

    Open Access

    • Sequence and chromatin determinants of transcription factor binding and the establishment of cell type-specific binding patterns

    Srivastava, D. & Mahony, S., Jun 2020, In : Biochimica et Biophysica Acta - Gene Regulatory Mechanisms. 1863, 6, 194443.

    Research output: Contribution to journal › Review article

    • 1 Scopus citations

    Systematic integration of GATA transcription factors and epigenomes via IDEAS paints the regulatory landscape of hematopoietic cells

    Hardison, R. C., Zhang, Y., Keller, C. A., Xiang, G., Heuston, E. F., An, L., Lichtenberg, J., Giardine, B. M., Bodine, D., Mahony, S., Li, Q., Yue, F., Weiss, M. J., Blobel, G. A., Taylor, J., Hughes, J., Higgs, D. R. & Göttgens, B., Jan 1 2020, In : IUBMB Life. 72, 1, p. 27-38 12 p.

    Research output: Contribution to journal › Review article

    Open Access