Thomas Keith Wood

    • 15292 Citations
    • 69 h-Index
    1990 …2020

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    2020

    Persister Cells Resuscitate Using Membrane Sensors that Activate Chemotaxis, Lower cAMP Levels, and Revive Ribosomes

    Yamasaki, R., Song, S., Benedik, M. J. & Wood, T. K., Jan 24 2020, In : iScience. 23, 1, 100792.

    Research output: Contribution to journalArticle

    Open Access
    1 Scopus citations

    Persister cells resuscitate via ribosome modification by 23S rRNA pseudouridine synthase RluD

    Song, S. & Wood, T. K., Mar 1 2020, In : Environmental microbiology. 22, 3, p. 850-857 8 p.

    Research output: Contribution to journalArticle

    1 Scopus citations

    ppGpp ribosome dimerization model for bacterial persister formation and resuscitation

    Song, S. & Wood, T. K., Mar 5 2020, In : Biochemical and Biophysical Research Communications. 523, 2, p. 281-286 6 p.

    Research output: Contribution to journalArticle

    2019

    Deciphering the Antitoxin-Regulated Bacterial Stress Response via Single-Cell Analysis

    Wu, L., Zhang, M., Song, Y., Deng, M., He, S., Su, L., Chen, Y., Wood, T. K. & Yan, X., Dec 20 2019, In : ACS chemical biology. 14, 12, p. 2859-2866 8 p.

    Research output: Contribution to journalArticle

    1 Scopus citations

    Identification of a potent indigoid persister antimicrobial by screening dormant cells

    Song, S., Gong, T., Yamasaki, R., Kim, J. S. & Wood, T. K., Jan 1 2019, In : Biotechnology and bioengineering. 116, 9, p. 2263-2274 12 p.

    Research output: Contribution to journalArticle

    Open Access
    2 Scopus citations

    Interkingdom signal indole inhibits Pseudomonas aeruginosa persister cell waking

    Zhang, W., Yamasaki, R., Song, S. & Wood, T. K., Dec 1 2019, In : Journal of Applied Microbiology. 127, 6, p. 1768-1775 8 p.

    Research output: Contribution to journalArticle

    1 Scopus citations

    Phages Mediate Bacterial Self-Recognition

    Song, S., Guo, Y., Kim, J. S., Wang, X. & Wood, T. K., Apr 16 2019, In : Cell Reports. 27, 3, p. 737-749.e4

    Research output: Contribution to journalArticle

    Open Access
    2 Scopus citations

    Pseudogene YdfW in Escherichia coli decreases hydrogen production through nitrate respiration pathways

    Mokhtar, M., Mohd Yusoff, M. Z., Mohamad Ali, M. S., Mustapha, N. A., Wood, T. K. & Maeda, T., Jun 21 2019, In : International Journal of Hydrogen Energy. 44, 31, p. 16212-16223 12 p.

    Research output: Contribution to journalArticle

    1 Scopus citations

    Quorum sensing between Gram-negative bacteria responsible for methane production in a complex waste sewage sludge consortium

    Nguyen, P. D. T., Mustapha, N. A., Kadokami, K., Garcia-Contreras, R., Wood, T. K. & Maeda, T., Feb 1 2019, In : Applied Microbiology and Biotechnology. 103, 3, p. 1485-1495 11 p.

    Research output: Contribution to journalArticle

    4 Scopus citations

    Resistance to oxidative stress by inner membrane protein ElaB is regulated by OxyR and RpoS

    Guo, Y., Li, Y., Zhan, W., Wood, T. K. & Wang, X., Mar 2019, In : Microbial Biotechnology. 12, 2, p. 392-404 13 p.

    Research output: Contribution to journalArticle

    1 Scopus citations

    Seeding Public Goods Is Essential for Maintaining Cooperation in Pseudomonas aeruginosa

    Loarca, D., Díaz, D., Quezada, H., Guzmán-Ortiz, A. L., Rebollar-Ruiz, A., Presas, A. M. F., Ramírez-Peris, J., Franco-Cendejas, R., Maeda, T., Wood, T. K. & García-Contreras, R., Oct 9 2019, In : Frontiers in Microbiology. 10, 2322.

    Research output: Contribution to journalArticle

    Open Access

    Symbiosis of a P2-family phage and deep-sea Shewanella putrefaciens

    Liu, X., Tang, K., Zhang, D., Li, Y., Liu, Z., Yao, J., Wood, T. K. & Wang, X., Nov 1 2019, In : Environmental microbiology. 21, 11, p. 4212-4232 21 p.

    Research output: Contribution to journalArticle

    Toxins of toxin/antitoxin systems are inactivated primarily through promoter mutations

    Fernandez-Garcia, L., Kim, J. S., Tomas, M. & Wood, T. K., Dec 1 2019, In : Journal of Applied Microbiology. 127, 6, p. 1859-1868 10 p.

    Research output: Contribution to journalArticle

    σ54-Dependent regulator DVU2956 switches Desulfovibrio vulgaris from biofilm formation to planktonic growth and regulates hydrogen sulfide production

    Zhu, L., Gong, T., Wood, T. L., Yamasaki, R. & Wood, T. K., Oct 1 2019, In : Environmental microbiology. 21, 10, p. 3564-3576 13 p.

    Research output: Contribution to journalArticle

    1 Scopus citations
    2018

    Electron carriers increase electricity production in methane microbial fuel cells that reverse methanogenesis

    Yamasaki, R., Maeda, T. & Wood, T. K., Jul 25 2018, In : Biotechnology for Biofuels. 11, 1, 211.

    Research output: Contribution to journalArticle

    5 Scopus citations

    GhoT of the GhoT/GhoS toxin/antitoxin system damages lipid membranes by forming transient pores

    Kim, J. S., Schantz, A. B., Song, S., Kumar, M. & Wood, T. K., Mar 4 2018, In : Biochemical and Biophysical Research Communications. 497, 2, p. 467-472 6 p.

    Research output: Contribution to journalArticle

    4 Scopus citations

    Glycoside hydrolase DisH from Desulfovibrio vulgaris degrades the N-acetylgalactosamine component of diverse biofilms

    Zhu, L., Poosarla, V. G., Song, S., Wood, T. L., Miller, D. S., Yin, B. & Wood, T. K., Jun 2018, In : Environmental microbiology. 20, 6, p. 2026-2037 12 p.

    Research output: Contribution to journalArticle

    5 Scopus citations

    Pseudogene product YqiG is important for pflB expression and biohydrogen production in Escherichia coli BW25113

    Zakaria, M. A., Mohd Yusoff, M. Z., Zakaria, M. R., Hassan, M. A., Wood, T. K. & Maeda, T., Oct 1 2018, In : 3 Biotech. 8, 10, 435.

    Research output: Contribution to journalArticle

    1 Scopus citations

    Pyocyanin restricts social cheating in Pseudomonas aeruginosa

    Castañeda-Tamez, P., Ramírez-Peris, J., Pérez-Velázquez, J., Kuttler, C., Jalalimanesh, A., Saucedo-Mora, M., Jiménez-Cortés, J. G., Maeda, T., González, Y., Tomás, M., Wood, T. K. & García-Contreras, R., Jun 27 2018, In : Frontiers in Microbiology. 9, JUN, 1348.

    Research output: Contribution to journalArticle

    8 Scopus citations

    Rhamnolipids from Pseudomonas aeruginosa disperse the biofilms of sulfate-reducing bacteria

    Wood, T. L., Gong, T., Zhu, L., Miller, J., Miller, D. S., Yin, B. & Wood, T. K., Dec 1 2018, In : npj Biofilms and Microbiomes. 4, 1, 22.

    Research output: Contribution to journalArticle

    10 Scopus citations

    Serine hydroxymethyltransferase ShrA (PA2444) controls rugose small-colony variant formation in Pseudomonas aeruginosa

    Pu, M., Sheng, L., Song, S., Gong, T. & Wood, T. K., Feb 27 2018, In : Frontiers in Microbiology. 9, FEB, 315.

    Research output: Contribution to journalArticle

    3 Scopus citations

    Single cell observations show persister cells wake based on ribosome content

    Kim, J. S., Yamasaki, R., Song, S., Zhang, W. & Wood, T. K., Jun 2018, In : Environmental microbiology. 20, 6, p. 2085-2098 14 p.

    Research output: Contribution to journalArticle

    16 Scopus citations

    Substrate binding protein DppA1 of ABC transporter DppBCDF increases biofilm formation in Pseudomonas aeruginosa by inhibiting Pf5 prophage lysis

    Lee, Y., Song, S., Sheng, L., Zhu, L., Kim, J. S. & Wood, T. K., Jan 24 2018, In : Frontiers in Microbiology. 9, JAN, 30.

    Research output: Contribution to journalArticle

    3 Scopus citations

    Viable bacteria persist on antibiotic spacers following two-stage revision for periprosthetic joint infection

    Ma, D., Shanks, R. M. Q., Davis, C. M., Craft, D. W., Wood, T. K., Hamlin, B. R. & Urish, K. L., Jan 2018, In : Journal of Orthopaedic Research. 36, 1, p. 452-458 7 p.

    Research output: Contribution to journalArticle

    14 Scopus citations

    Viable but non-culturable and persistence describe the same bacterial stress state

    Kim, J. S., Chowdhury, N., Yamasaki, R. & Wood, T. K., Jun 2018, In : Environmental microbiology. 20, 6, p. 2038-2048 11 p.

    Research output: Contribution to journalArticle

    30 Scopus citations
    2017

    A Genome-Scale Modeling Approach to Quantify Biofilm Component Growth of Salmonella Typhimurium

    Ribaudo, N., Li, X., Davis, B., Wood, T. K. & Huang, Z. J., Jan 1 2017, In : Journal of Food Science. 82, 1, p. 154-166 13 p.

    Research output: Contribution to journalArticle

    5 Scopus citations

    Computational de novo design of antibodies binding to a peptide with high affinity

    Poosarla, V. G., Li, T., Goh, B. C., Schulten, K., Wood, T. K. & Maranas, C. D., Jun 2017, In : Biotechnology and bioengineering. 114, 6, p. 1331-1342 12 p.

    Research output: Contribution to journalArticle

    10 Scopus citations

    Dispersal and inhibitory roles of mannose, 2-deoxy-d-glucose and N-acetylgalactosaminidase on the biofilm of Desulfovibrio vulgaris

    Poosarla, V. G., Wood, T. L., Zhu, L., Miller, D. S., Yin, B. & Wood, T. K., Dec 1 2017, In : Environmental Microbiology Reports. 9, 6, p. 779-787 9 p.

    Research output: Contribution to journalArticle

    6 Scopus citations

    Electricity from methane by reversing methanogenesis

    McAnulty, M. J., Poosarla, V. G., Kim, K. Y., Jasso-Chávez, R., Logan, B. E. & Wood, T. K., May 17 2017, In : Nature communications. 8, 15419.

    Research output: Contribution to journalArticle

    41 Scopus citations

    Indole: An evolutionarily conserved influencer of behavior across kingdoms

    Tomberlin, J. K., Crippen, T. L., Wu, G., Griffin, A. S., Wood, T. K. & Kilner, R. M., Feb 1 2017, In : BioEssays. 39, 2, 1600203.

    Research output: Contribution to journalArticle

    11 Scopus citations

    Interkingdom cues by bacteria associated with conspecific and heterospecific eggs of cochliomyia macellaria and chrysomya rufifacies (diptera: Calliphoridae) potentially govern succession on carrion

    Brundage, A. L., Crippen, T. L., Singh, B., Benbow, M. E., Liu, W., Tarone, A. M., Wood, T. K. & Tomberlin, J. K., Jan 1 2017, In : Annals of the Entomological Society of America. 110, 1, p. 73-82 10 p.

    Research output: Contribution to journalArticle

    Metabolic engineering of Methanosarcina acetivorans for lactate production from methane

    McAnulty, M. J., Poosarla, V. G., Li, J., Soo, V. W. C., Zhu, F. & Wood, T. K., Apr 1 2017, In : Biotechnology and bioengineering. 114, 4, p. 852-861 10 p.

    Research output: Contribution to journalArticle

    17 Scopus citations

    Metabolic manipulation of methanogens for methane machinations

    Wood, T. K., Jan 1 2017, In : Microbial Biotechnology. 10, 1, p. 9-10 2 p.

    Research output: Contribution to journalArticle

    2 Scopus citations

    Oceans as bioenergy pools for methane production using activated methanogens in waste sewage sludge

    Mohd Yasin, N. H., Ikegami, A., Wood, T. K., Yu, C. P., Haruyama, T., Takriff, M. S. & Maeda, T., Jan 1 2017, In : Applied Energy. 202, p. 399-407 9 p.

    Research output: Contribution to journalArticle

    2 Scopus citations

    Reactive micromixing eliminates fouling and concentration polarization in reverse osmosis membranes

    Guha, R., Xiong, B., Geitner, M., Moore, T., Wood, T. K., Velegol, D. & Kumar, M., Jan 1 2017, In : Journal of Membrane Science. 542, p. 8-17 10 p.

    Research output: Contribution to journalArticle

    11 Scopus citations

    Repurposing of anticancer drugs for the treatment of bacterial infections

    Soo, V. W. C., Kwan, B. W., Quezada, H., Castillo-Juárez, I., Pérez-Eretza, B., García-Contreras, S. J., Martínez-Vázquez, M., Wood, T. K. & García-Contreras, R., Apr 1 2017, In : Current Topics in Medicinal Chemistry. 17, 10, p. 1157-1176 20 p.

    Research output: Contribution to journalArticle

    29 Scopus citations

    Repurposing the anticancer drug mitomycin C for the treatment of persistent Acinetobacter baumannii infections

    Cruz-Muñiz, M. Y., López-Jacome, L. E., Hernández-Durán, M., Franco-Cendejas, R., Licona-Limón, P., Ramos-Balderas, J. L., Martinéz-Vázquez, M., Belmont-Díaz, J. A., Wood, T. K. & García-Contreras, R., Jan 1 2017, In : International Journal of Antimicrobial Agents. 49, 1, p. 88-92 5 p.

    Research output: Contribution to journalArticle

    21 Scopus citations

    Selection of functional quorum sensing systems by lysogenic bacteriophages in pseudomonas aeruginosa

    Saucedo-Mora, M. A., Castañeda-Tamez, P., Cazares, A., Pérez-Velázquez, J., Hense, B. A., Cazares, D., Figueroa, W., Carballo, M., Guarneros, G., Pérez-Eretza, B., Cruz, N., Nishiyama, Y., Maeda, T., Belmont-Díaz, J. A., Wood, T. K. & García-Contreras, R., Aug 1 2017, In : Frontiers in Microbiology. 8, 1669.

    Research output: Contribution to journalArticle

    Open Access
    11 Scopus citations

    Strategies for combating persister cell and biofilm infections

    Wood, T. K., Sep 2017, In : Microbial Biotechnology. 10, 5, p. 1054-1056 3 p.

    Research output: Contribution to journalArticle

    18 Scopus citations

    Tail-anchored inner membrane protein ElaB increases resistance to stress while reducing persistence in Escherichia coli

    Guo, Y., Liu, X., Li, B., Yao, J., Wood, T. K. & Wang, X., May 1 2017, In : Journal of bacteriology. 199, 9, e00057-17.

    Research output: Contribution to journalArticle

    6 Scopus citations

    Tolerant, growing cells from nutrient shifts are not persister cells

    Kim, J. S. & Wood, T. K., Mar 1 2017, In : mBio. 8, 2, e00354-17.

    Research output: Contribution to journalArticle

    19 Scopus citations
    2016

    An oxygen-sensitive toxin-antitoxin system

    Marimon, O., Teixeira, J. M. C., Cordeiro, T. N., Soo, V. W. C., Wood, T. L., Mayzel, M., Amata, I., García, J., Morera, A., Gay, M., Vilaseca, M., Orekhov, V. Y., Wood, T. K. & Pons, M., Dec 8 2016, In : Nature communications. 7, 13634.

    Research output: Contribution to journalArticle

    11 Scopus citations

    Antibiotic-tolerant Staphylococcus aureus Biofilm Persists on Arthroplasty Materials

    Urish, K. L., DeMuth, P. W., Kwan, B. W., Craft, D. W., Ma, D., Haider, H., Tuan, R. S., Wood, T. K. & Davis, C. M., Jul 1 2016, In : Clinical orthopaedics and related research. 474, 7, p. 1649-1656 8 p.

    Research output: Contribution to journalArticle

    31 Scopus citations

    Assessing methanotrophy and carbon fixation for biofuel production by Methanosarcina acetivorans

    Nazem-Bokaee, H., Gopalakrishnan, S., Ferry, J. G., Wood, T. K. & Maranas, C. D., Jan 17 2016, In : Microbial Cell Factories. 15, 1, 10.

    Research output: Contribution to journalArticle

    22 Scopus citations

    DNA-crosslinker cisplatin eradicates bacterial persister cells

    Chowdhury, N., Wood, T. L., Martínez-Vázquez, M., García-Contreras, R. & Wood, T. K., Sep 1 2016, In : Biotechnology and bioengineering. 113, 9, p. 1984-1992 9 p.

    Research output: Contribution to journalArticle

    33 Scopus citations

    Halogenated indoles eradicate bacterial persister cells and biofilms

    Lee, J. H., Kim, Y. G., Gwon, G., Wood, T. K. & Lee, J., Dec 1 2016, In : AMB Express. 6, 1, 123.

    Research output: Contribution to journalArticle

    24 Scopus citations

    Living biofouling-resistant membranes as a model for the beneficial use of engineered biofilms

    Wood, T. L., Guha, R., Tang, L., Geitner, M., Kumar, M. & Wood, T. K., May 17 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 20, p. E2802-E2811

    Research output: Contribution to journalArticle

    28 Scopus citations

    Persistence Increases in the Absence of the Alarmone Guanosine Tetraphosphate by Reducing Cell Growth

    Chowdhury, N., Kwan, B. W. & Wood, T. K., Feb 3 2016, In : Scientific reports. 6, 20519.

    Research output: Contribution to journalArticle

    48 Scopus citations

    Reversing methanogenesis to capture methane for liquid biofuel precursors

    Soo, V. W. C., McAnulty, M. J., Tripathi, A., Zhu, F., Zhang, L., Hatzakis, E., Smith, P. B., Agrawal, S., Nazem-Bokaee, H., Gopalakrishnan, S., Salis, H. M., Ferry, J. G., Maranas, C. D., Patterson, A. D. & Wood, T. K., Jan 14 2016, In : Microbial Cell Factories. 15, 1, 11.

    Research output: Contribution to journalArticle

    54 Scopus citations

    Streptomyces-derived actinomycin D inhibits biofilm formation by Staphylococcus aureus and its hemolytic activity

    Lee, J. H., Kim, Y. G., Lee, K., Kim, C. J., Park, D. J., Ju, Y., Lee, J. C., Wood, T. K. & Lee, J., Jan 2 2016, In : Biofouling. 32, 1, p. 45-56 12 p.

    Research output: Contribution to journalArticle

    13 Scopus citations