An AFLP linkage map using a hybrid population of Populus tomentosa

Yun Zhe Zhang, Hong Xia Liu, Rong Ling Wu, Ming Liang Li, Jian Jun Hu, Wei Lun Yin, Yi Fan Han

Research output: Contribution to journalArticle

1 Citation (Scopus)

Abstract

The map was constructed using Populus tomentosa × P . alba var. pyramidalis × P . tomentosa hybrid population in which the resistance of Dothrorella gregaria Sacc was segregated. The authors had obtained 662 markers using 19 Pstl/Msel primer pairs and 4 EcoRI/Msel primer pairs, of which 43.2% had 3:1 in segregation, 14.5% appears to be non-parental heteroduplex, and 48.8% was distorted.239 markers had been mapped into 22 linkage groups (each including 4 loci or more), and the integrated map was 4 418 cM in length, with an average locus interval of 18.5 cM. Linkage group LGI was the largest one and covered 524 cM with 25 markers. The densest linkage group was LG13 with an average interval of 6.7 cM in length. There were duplicated loci for 8 markers, and 7 markers that linked to one of markers in a linkage group but couldn't be mapped into that group. In addition, there were 15 minor groups harboring 2 ∼ 3 markers belonged to the parents. Moreover, 13 and 21 groups belonged to paternal and maternal parent, respectively.

Original languageEnglish (US)
Pages (from-to)595-603
Number of pages9
JournalForest Research
Volume16
Issue number5
StatePublished - Oct 1 2003

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Populus tomentosa
linkage groups
amplified fragment length polymorphism
chromosome mapping
loci
marker

All Science Journal Classification (ASJC) codes

  • Forestry
  • Ecology
  • Plant Science

Cite this

Zhang, Y. Z., Liu, H. X., Wu, R. L., Li, M. L., Hu, J. J., Yin, W. L., & Han, Y. F. (2003). An AFLP linkage map using a hybrid population of Populus tomentosa. Forest Research, 16(5), 595-603.
Zhang, Yun Zhe ; Liu, Hong Xia ; Wu, Rong Ling ; Li, Ming Liang ; Hu, Jian Jun ; Yin, Wei Lun ; Han, Yi Fan. / An AFLP linkage map using a hybrid population of Populus tomentosa. In: Forest Research. 2003 ; Vol. 16, No. 5. pp. 595-603.
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Zhang, YZ, Liu, HX, Wu, RL, Li, ML, Hu, JJ, Yin, WL & Han, YF 2003, 'An AFLP linkage map using a hybrid population of Populus tomentosa', Forest Research, vol. 16, no. 5, pp. 595-603.

An AFLP linkage map using a hybrid population of Populus tomentosa. / Zhang, Yun Zhe; Liu, Hong Xia; Wu, Rong Ling; Li, Ming Liang; Hu, Jian Jun; Yin, Wei Lun; Han, Yi Fan.

In: Forest Research, Vol. 16, No. 5, 01.10.2003, p. 595-603.

Research output: Contribution to journalArticle

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AU - Zhang, Yun Zhe

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AU - Yin, Wei Lun

AU - Han, Yi Fan

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N2 - The map was constructed using Populus tomentosa × P . alba var. pyramidalis × P . tomentosa hybrid population in which the resistance of Dothrorella gregaria Sacc was segregated. The authors had obtained 662 markers using 19 Pstl/Msel primer pairs and 4 EcoRI/Msel primer pairs, of which 43.2% had 3:1 in segregation, 14.5% appears to be non-parental heteroduplex, and 48.8% was distorted.239 markers had been mapped into 22 linkage groups (each including 4 loci or more), and the integrated map was 4 418 cM in length, with an average locus interval of 18.5 cM. Linkage group LGI was the largest one and covered 524 cM with 25 markers. The densest linkage group was LG13 with an average interval of 6.7 cM in length. There were duplicated loci for 8 markers, and 7 markers that linked to one of markers in a linkage group but couldn't be mapped into that group. In addition, there were 15 minor groups harboring 2 ∼ 3 markers belonged to the parents. Moreover, 13 and 21 groups belonged to paternal and maternal parent, respectively.

AB - The map was constructed using Populus tomentosa × P . alba var. pyramidalis × P . tomentosa hybrid population in which the resistance of Dothrorella gregaria Sacc was segregated. The authors had obtained 662 markers using 19 Pstl/Msel primer pairs and 4 EcoRI/Msel primer pairs, of which 43.2% had 3:1 in segregation, 14.5% appears to be non-parental heteroduplex, and 48.8% was distorted.239 markers had been mapped into 22 linkage groups (each including 4 loci or more), and the integrated map was 4 418 cM in length, with an average locus interval of 18.5 cM. Linkage group LGI was the largest one and covered 524 cM with 25 markers. The densest linkage group was LG13 with an average interval of 6.7 cM in length. There were duplicated loci for 8 markers, and 7 markers that linked to one of markers in a linkage group but couldn't be mapped into that group. In addition, there were 15 minor groups harboring 2 ∼ 3 markers belonged to the parents. Moreover, 13 and 21 groups belonged to paternal and maternal parent, respectively.

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Zhang YZ, Liu HX, Wu RL, Li ML, Hu JJ, Yin WL et al. An AFLP linkage map using a hybrid population of Populus tomentosa. Forest Research. 2003 Oct 1;16(5):595-603.