An automated program to find animals and crop photographs for individual recognition

Patrick Buehler, Bill Carroll, Ashish Bhatia, Vivek Gupta, Derek Lee

Research output: Contribution to journalArticle

Abstract

Detailed data on individual animals are critical to ecological and evolutionary studies, but attaching identifying marks can alter individual fates and behavior leading to biases in parameter estimates and ethical issues. Individual-recognition software has been developed to assist in identifying many species from non-invasive photographic data. These programs utilize algorithms to find unique individual characteristics and compare images to a catalogue of known individuals. Currently, all applications for individual identification require manual processing to crop images so only the area of interest remains, or the area of interest must be manually delineated in each image. Thus, one of the main bottlenecks in processing data from photographic capture-recapture surveys is in cropping to an area of interest so that matching algorithms can identify the individual. Here, we describe the development and testing of an automated cropping program. The methods and techniques we describe are broadly applicable to any system where raw photos must be cropped down to a specific area of interest before pattern recognition software can be used for individual identification. We developed and tested the program for use with identification photos of wild giraffes.

Original languageEnglish (US)
Pages (from-to)191-196
Number of pages6
JournalEcological Informatics
Volume50
DOIs
StatePublished - Mar 1 2019

Fingerprint

photographs
Crops
photograph
Animals
Giraffa camelopardalis
crop
cropping practice
animal
crops
Pattern recognition
software
animals
pattern recognition
Capture-recapture
Software
Testing
Matching Algorithm
Processing
methodology
Pattern Recognition

All Science Journal Classification (ASJC) codes

  • Ecology, Evolution, Behavior and Systematics
  • Ecology
  • Modeling and Simulation
  • Ecological Modeling
  • Computer Science Applications
  • Computational Theory and Mathematics
  • Applied Mathematics

Cite this

Buehler, Patrick ; Carroll, Bill ; Bhatia, Ashish ; Gupta, Vivek ; Lee, Derek. / An automated program to find animals and crop photographs for individual recognition. In: Ecological Informatics. 2019 ; Vol. 50. pp. 191-196.
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An automated program to find animals and crop photographs for individual recognition. / Buehler, Patrick; Carroll, Bill; Bhatia, Ashish; Gupta, Vivek; Lee, Derek.

In: Ecological Informatics, Vol. 50, 01.03.2019, p. 191-196.

Research output: Contribution to journalArticle

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