Characterization of the Cofactor Composition of Escherichia coli Biotin Synthase

Michele Mader Cosper, Guy N.L. Jameson, Heather L. Hernández, Carsten Krebs, Boi Hanh Huynh, Michael K. Johnson

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80 Scopus citations

Abstract

The cofactor content of in vivo, as-isolated, and reconstituted forms of recombinant Escherichia coli biotin synthase (BioB) has been investigated using the combination of UV-visible absorption, resonance Raman, and Mössbauer spectroscopies along with parallel analytical and activity assays. In contrast to the recent report that E. coli BioB is a pyridoxal phosphate (PLP)-dependent enzyme with intrinsic cysteine desulfurase activity (Ollagnier-deChoudens, S., Mulliez, E., Hewitson, K. S., and Fontecave, M. (2002) Biochemistry 41, 9145-9152), no evidence for PLP binding or for PLP-induced cysteine desulfurase or biotin synthase activity was observed with any of the forms of BioB investigated in this work. The results confirm that BioB contains two distinct Fe-S cluster binding sites. One site accommodates a [2Fe-2S]2+ cluster with partial noncysteinyl ligation that can only be reconstituted in vitro in the presence of O2. The other site accommodates a [4Fe-4S]2+,+ cluster that binds S-adenosylmethionine (SAM) at a unique Fe site of the [4Fe-4S]2+ cluster and undergoes O 2-induced degradation via a distinct type of [2Fe-2S]2+ cluster intermediate. In vivo Mössbauer studies show that recombinant BioB in anaerobically grown cells is expressed exclusively in an inactive form containing only the as-isolated [2Fe-2S]2+ cluster and demonstrate that the [2Fe-2S]2+ cluster is not a consequence of overexpressing the recombinant enzyme under aerobic growth conditions. Overall the results clarify the confusion in the literature concerning the Fe-S cluster composition and the in vitro reconstitution and O2-induced cluster transformations that are possible for recombinant BioB. In addition, they provide a firm foundation for assessing cluster transformations that occur during turnover and the catalytic competence of the [2Fe-2S]2+ cluster as the immediate S-donor for biotin biosynthesis.

Original languageEnglish (US)
Pages (from-to)2007-2021
Number of pages15
JournalBiochemistry
Volume43
Issue number7
DOIs
StatePublished - Feb 24 2004

All Science Journal Classification (ASJC) codes

  • Biochemistry

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    Cosper, M. M., Jameson, G. N. L., Hernández, H. L., Krebs, C., Huynh, B. H., & Johnson, M. K. (2004). Characterization of the Cofactor Composition of Escherichia coli Biotin Synthase. Biochemistry, 43(7), 2007-2021. https://doi.org/10.1021/bi0356653