Do genome-scale models need exact solvers or clearer standards?

Ali Ebrahim, Eivind Almaas, Eugen Bauer, Aarash Bordbar, Anthony P. Burgard, Roger L. Chang, Andreas Dräger, Iman Famili, Adam M. Feist, Ronan M.T. Fleming, Stephen S. Fong, Vassily Hatzimanikatis, Allen Holder, Michael Hucka, Daniel Hyduke, Neema Jamshidi, Sang Yup Lee, Nicolas Le Novère, Joshua A. Lerman, Nathan E. LewisDing Ma, Radhakrishnan Mahadevan, Costas D. Maranas, Harish Nagarajan, Ali Navid, Jens Nielsen, Lars K. Nielsen, Juan Nogales, Alberto Noronha, Csaba Pal, Bernhard O. Palsson, Jason A. Papin, Kiran R. Patil, Nathan D. Price, Jennifer L. Reed, Michael Saunders, Ryan S. Senger, Nikolaus Sonnenschein, Yuekai Sun, Ines Thiele

Research output: Contribution to journalLetter

21 Citations (Scopus)
Original languageEnglish (US)
Article number831
JournalMolecular Systems Biology
Volume11
Issue number10
DOIs
StatePublished - Oct 1 2015

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Genes
Thermodynamics

All Science Journal Classification (ASJC) codes

  • Biochemistry, Genetics and Molecular Biology(all)
  • Immunology and Microbiology(all)
  • Agricultural and Biological Sciences(all)
  • Applied Mathematics

Cite this

Ebrahim, A., Almaas, E., Bauer, E., Bordbar, A., Burgard, A. P., Chang, R. L., ... Thiele, I. (2015). Do genome-scale models need exact solvers or clearer standards? Molecular Systems Biology, 11(10), [831]. https://doi.org/10.15252/msb.20156157
Ebrahim, Ali ; Almaas, Eivind ; Bauer, Eugen ; Bordbar, Aarash ; Burgard, Anthony P. ; Chang, Roger L. ; Dräger, Andreas ; Famili, Iman ; Feist, Adam M. ; Fleming, Ronan M.T. ; Fong, Stephen S. ; Hatzimanikatis, Vassily ; Holder, Allen ; Hucka, Michael ; Hyduke, Daniel ; Jamshidi, Neema ; Lee, Sang Yup ; Le Novère, Nicolas ; Lerman, Joshua A. ; Lewis, Nathan E. ; Ma, Ding ; Mahadevan, Radhakrishnan ; Maranas, Costas D. ; Nagarajan, Harish ; Navid, Ali ; Nielsen, Jens ; Nielsen, Lars K. ; Nogales, Juan ; Noronha, Alberto ; Pal, Csaba ; Palsson, Bernhard O. ; Papin, Jason A. ; Patil, Kiran R. ; Price, Nathan D. ; Reed, Jennifer L. ; Saunders, Michael ; Senger, Ryan S. ; Sonnenschein, Nikolaus ; Sun, Yuekai ; Thiele, Ines. / Do genome-scale models need exact solvers or clearer standards?. In: Molecular Systems Biology. 2015 ; Vol. 11, No. 10.
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Ebrahim, A, Almaas, E, Bauer, E, Bordbar, A, Burgard, AP, Chang, RL, Dräger, A, Famili, I, Feist, AM, Fleming, RMT, Fong, SS, Hatzimanikatis, V, Holder, A, Hucka, M, Hyduke, D, Jamshidi, N, Lee, SY, Le Novère, N, Lerman, JA, Lewis, NE, Ma, D, Mahadevan, R, Maranas, CD, Nagarajan, H, Navid, A, Nielsen, J, Nielsen, LK, Nogales, J, Noronha, A, Pal, C, Palsson, BO, Papin, JA, Patil, KR, Price, ND, Reed, JL, Saunders, M, Senger, RS, Sonnenschein, N, Sun, Y & Thiele, I 2015, 'Do genome-scale models need exact solvers or clearer standards?', Molecular Systems Biology, vol. 11, no. 10, 831. https://doi.org/10.15252/msb.20156157

Do genome-scale models need exact solvers or clearer standards? / Ebrahim, Ali; Almaas, Eivind; Bauer, Eugen; Bordbar, Aarash; Burgard, Anthony P.; Chang, Roger L.; Dräger, Andreas; Famili, Iman; Feist, Adam M.; Fleming, Ronan M.T.; Fong, Stephen S.; Hatzimanikatis, Vassily; Holder, Allen; Hucka, Michael; Hyduke, Daniel; Jamshidi, Neema; Lee, Sang Yup; Le Novère, Nicolas; Lerman, Joshua A.; Lewis, Nathan E.; Ma, Ding; Mahadevan, Radhakrishnan; Maranas, Costas D.; Nagarajan, Harish; Navid, Ali; Nielsen, Jens; Nielsen, Lars K.; Nogales, Juan; Noronha, Alberto; Pal, Csaba; Palsson, Bernhard O.; Papin, Jason A.; Patil, Kiran R.; Price, Nathan D.; Reed, Jennifer L.; Saunders, Michael; Senger, Ryan S.; Sonnenschein, Nikolaus; Sun, Yuekai; Thiele, Ines.

In: Molecular Systems Biology, Vol. 11, No. 10, 831, 01.10.2015.

Research output: Contribution to journalLetter

TY - JOUR

T1 - Do genome-scale models need exact solvers or clearer standards?

AU - Ebrahim, Ali

AU - Almaas, Eivind

AU - Bauer, Eugen

AU - Bordbar, Aarash

AU - Burgard, Anthony P.

AU - Chang, Roger L.

AU - Dräger, Andreas

AU - Famili, Iman

AU - Feist, Adam M.

AU - Fleming, Ronan M.T.

AU - Fong, Stephen S.

AU - Hatzimanikatis, Vassily

AU - Holder, Allen

AU - Hucka, Michael

AU - Hyduke, Daniel

AU - Jamshidi, Neema

AU - Lee, Sang Yup

AU - Le Novère, Nicolas

AU - Lerman, Joshua A.

AU - Lewis, Nathan E.

AU - Ma, Ding

AU - Mahadevan, Radhakrishnan

AU - Maranas, Costas D.

AU - Nagarajan, Harish

AU - Navid, Ali

AU - Nielsen, Jens

AU - Nielsen, Lars K.

AU - Nogales, Juan

AU - Noronha, Alberto

AU - Pal, Csaba

AU - Palsson, Bernhard O.

AU - Papin, Jason A.

AU - Patil, Kiran R.

AU - Price, Nathan D.

AU - Reed, Jennifer L.

AU - Saunders, Michael

AU - Senger, Ryan S.

AU - Sonnenschein, Nikolaus

AU - Sun, Yuekai

AU - Thiele, Ines

PY - 2015/10/1

Y1 - 2015/10/1

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U2 - 10.15252/msb.20156157

DO - 10.15252/msb.20156157

M3 - Letter

C2 - 26467284

AN - SCOPUS:84945933008

VL - 11

JO - Molecular Systems Biology

JF - Molecular Systems Biology

SN - 1744-4292

IS - 10

M1 - 831

ER -

Ebrahim A, Almaas E, Bauer E, Bordbar A, Burgard AP, Chang RL et al. Do genome-scale models need exact solvers or clearer standards? Molecular Systems Biology. 2015 Oct 1;11(10). 831. https://doi.org/10.15252/msb.20156157