Evaluation of multi-color genetically encoded Ca2+ indicators in filamentous fungi

Hye Seon Kim, Jung Eun Kim, Aram Hwangbo, Jasper Akerboom, Loren L. Looger, Randall Duncan, Hokyoung Son, Kirk J. Czymmek, Seogchan Kang

Research output: Contribution to journalArticlepeer-review

Abstract

Genetically encoded Ca2+ indicators (GECIs) enable long-term monitoring of cellular and subcellular dynamics of this second messenger in response to environmental and developmental cues without relying on exogenous dyes. Continued development and optimization in GECIs, combined with advances in gene manipulation, offer new opportunities for investigating the mechanism of Ca2+ signaling in fungi, ranging from documenting Ca2+ signatures under diverse conditions and genetic backgrounds to evaluating how changes in Ca2+ signature impact calcium-binding proteins and subsequent cellular changes. Here, we attempted to express multi-color (green, yellow, blue, cyan, and red) circularly permuted fluorescent protein (FP)-based Ca2+ indicators driven by multiple fungal promoters in Fusarium oxysporum, F. graminearum, and Neurospora crassa. Several variants were successfully expressed, with GCaMP5G driven by the Magnaporthe oryzae ribosomal protein 27 and F. verticillioides elongation factor-1α gene promoters being optimal for F. graminearum and F. oxysporum, respectively. Transformants expressing GCaMP5G were compared with those expressing YC3.60, a ratiometric Cameleon Ca2+ indicator. Wild-type and three Ca2+ signaling mutants of F. graminearum expressing GCaMP5G exhibited improved signal-to-noise and increased temporal and spatial resolution and are also more amenable to studies involving multiple FPs compared to strains expressing YC3.60.

Original languageEnglish (US)
Article number103540
JournalFungal Genetics and Biology
Volume149
DOIs
StatePublished - Apr 2021

All Science Journal Classification (ASJC) codes

  • Microbiology
  • Genetics

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