Galaxy cluster to cloud-Genomics at scale

The Galaxy Team

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Scopus citations

Abstract

Fueled by the radically increased capacity to generate data over the past decade, the field of biomedical research has been constrained by the ability to analyze data. Galaxy, an open genomics and biomedical research platform, has been democratizing access to data analysis tools with its effective and accessible web interface. However, the scale of data and the scope of tools required have proven to be a significant challenge for any monolithic deployment of the Galaxy application. We have found that a distributed and federated approach to utilizing compute and storage resources is necessary. This paper describes the ongoing efforts in creating a ubiquitous platform capable of simultaneously utilizing dedicated as well as on-demand cloud resources.

Original languageEnglish (US)
Title of host publicationProceedings of GCE 2014
Subtitle of host publication9th Gateway Computing Environments Workshop, held in conjunction with SC 2014: The International Conference for High Performance Computing, Networking, Storage and Analysis
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages47-50
Number of pages4
ISBN (Electronic)9781479970308
DOIs
StatePublished - Jan 23 2015
Event9th Gateway Computing Environments Workshop, GCE 2014 - New Orleans, United States
Duration: Nov 21 2014 → …

Publication series

NameProceedings of GCE 2014: 9th Gateway Computing Environments Workshop, held in conjunction with SC 2014: The International Conference for High Performance Computing, Networking, Storage and Analysis

Other

Other9th Gateway Computing Environments Workshop, GCE 2014
CountryUnited States
CityNew Orleans
Period11/21/14 → …

All Science Journal Classification (ASJC) codes

  • Computer Networks and Communications
  • Computer Science Applications

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