Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica

Jacqueline Goordial, Isabelle Raymond-Bouchard, Robert Riley, Jennifer Ronholm, Nicole Shapiro, Tanja Woyke, Kurt M. LaButti, Hope Tice, Mojgan Amirebrahimi, Igor V. Grigoriev, Charles Greer, Corien Bakermans, Lyle Whyte

Research output: Contribution to journalArticle

8 Citations (Scopus)

Abstract

Here, we report the draft genome sequence of Rhodotorula sp. strain JG1b, a yeast that was isolated from ice-cemented permafrost in the upper-elevation McMurdo Dry Valleys, Antarctica. The sequenced genome size is 19.39 Mb, consisting of 156 scaffolds and containing a total of 5,625 predicted genes. This is the first known cold-adapted Rhodotorula sp. sequenced to date.

Original languageEnglish (US)
Article numbere00069-16
JournalGenome Announcements
Volume4
Issue number2
DOIs
StatePublished - Jan 1 2016

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Rhodotorula
Genome
Genome Size
Ice
Yeasts
Genes
Permafrost

All Science Journal Classification (ASJC) codes

  • Molecular Biology
  • Genetics

Cite this

Goordial, Jacqueline ; Raymond-Bouchard, Isabelle ; Riley, Robert ; Ronholm, Jennifer ; Shapiro, Nicole ; Woyke, Tanja ; LaButti, Kurt M. ; Tice, Hope ; Amirebrahimi, Mojgan ; Grigoriev, Igor V. ; Greer, Charles ; Bakermans, Corien ; Whyte, Lyle. / Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica. In: Genome Announcements. 2016 ; Vol. 4, No. 2.
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Goordial, J, Raymond-Bouchard, I, Riley, R, Ronholm, J, Shapiro, N, Woyke, T, LaButti, KM, Tice, H, Amirebrahimi, M, Grigoriev, IV, Greer, C, Bakermans, C & Whyte, L 2016, 'Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica', Genome Announcements, vol. 4, no. 2, e00069-16. https://doi.org/10.1128/genomeA.00069-16

Improved high-quality draft genome sequence of the eurypsychrophile Rhodotorula sp. JG1b, isolated from permafrost in the hyperarid upper-elevation McMurdo Dry Valleys, Antarctica. / Goordial, Jacqueline; Raymond-Bouchard, Isabelle; Riley, Robert; Ronholm, Jennifer; Shapiro, Nicole; Woyke, Tanja; LaButti, Kurt M.; Tice, Hope; Amirebrahimi, Mojgan; Grigoriev, Igor V.; Greer, Charles; Bakermans, Corien; Whyte, Lyle.

In: Genome Announcements, Vol. 4, No. 2, e00069-16, 01.01.2016.

Research output: Contribution to journalArticle

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AU - Shapiro, Nicole

AU - Woyke, Tanja

AU - LaButti, Kurt M.

AU - Tice, Hope

AU - Amirebrahimi, Mojgan

AU - Grigoriev, Igor V.

AU - Greer, Charles

AU - Bakermans, Corien

AU - Whyte, Lyle

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