Mapping complex traits as a dynamic system

Lidan Sun, Rongling Wu

Research output: Contribution to journalReview article

23 Citations (Scopus)

Abstract

Despite increasing emphasis on the genetic study of quantitative traits, we are still far from being able to chart a clear picture of their genetic architecture, given an inherent complexity involved in trait formation. A competing theory for studying such complex traits has emerged by viewing their phenotypic formation as a "system" in which a high-dimensional group of interconnected components act and interact across different levels of biological organization from molecules through cells to whole organisms. This system is initiated by a machinery of DNA sequences that regulate a cascade of biochemical pathways to synthesize endophenotypes and further assemble these endophenotypes toward the end-point phenotype in virtue of various developmental changes. This review focuses on a conceptual framework for genetic mapping of complex traits by which to delineate the underlying components, interactions and mechanisms that govern the system according to biological principles and understand how these components function synergistically under the control of quantitative trait loci (QTLs) to comprise a unified whole. This framework is built by a system of differential equations that quantifies how alterations of different components lead to the global change of trait development and function, and provides a quantitative and testable platform for assessing the multiscale interplay between QTLs and development. The method will enable geneticists to shed light on the genetic complexity of any biological system and predict, alter or engineer its physiological and pathological states.

Original languageEnglish (US)
Pages (from-to)155-185
Number of pages31
JournalPhysics of Life Reviews
Volume13
DOIs
StatePublished - Jan 1 2015

Fingerprint

Endophenotypes
Quantitative Trait Loci
DNA sequences
Biological systems
Machinery
Dynamical systems
Differential equations
Engineers
Molecules
quantitative trait loci
loci
geneticists
global change
quantitative traits
Phenotype
engineers
phenotype
chromosome mapping
biochemical pathways
machinery

All Science Journal Classification (ASJC) codes

  • Agricultural and Biological Sciences(all)
  • Physics and Astronomy(all)
  • Artificial Intelligence

Cite this

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Mapping complex traits as a dynamic system. / Sun, Lidan; Wu, Rongling.

In: Physics of Life Reviews, Vol. 13, 01.01.2015, p. 155-185.

Research output: Contribution to journalReview article

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