TY - JOUR
T1 - Marine Subsurface Microbial Community Shifts Across a Hydrothermal Gradient in Okinawa Trough Sediments
AU - Brandt, Leah D.
AU - House, Christopher H.
N1 - Funding Information:
Samples for this research were provided by the Integrated Ocean Drilling Program (IODP). The authors are grateful to the IODP Expedition 331 scientific party and expedition staff onboard the Chikyu that assisted with drilling, sampling, measurements, and sample storage during IODP Expedition 331. They thank the National Science Foundation for support for this work through the Ocean Leadership Grant BA- 40 TO T331B40 and through the Center for Dark Energy Biosphere Investigations (C-DEBI) Grant no. OCE-0939564. This project was also partially supported by the Penn State Astrobiology Research Center (through the NASA Astrobiology Institute, Cooperative Agreement no. NNA09DA76A). DNA was sequenced in one direction on a quarter plate of a 454 FLX+ Titanium sequencer (454 Life Sciences) at the Pennsylvania State University Center for Genome Analysis, which was partly funded using Tobacco Settlement Funds provided by the Pennsylvania Department of Health. The Roche 454 facility at the Pennsylvania StateUniversity Center for Comparative Genomics and Bioinformatics was funded, in part, by a grant from the Pennsylvania Department of Health using Tobacco Settlement Funds appropriated by the legislature. The Illumina sequencing data were made possible by the Deep Carbon Observatory's Census of Deep Life supported by the Alfred P. Sloan Foundation. Pyrosequencing was performed at the Marine Biological Laboratory (Woods Hole, MA, USA) and the authors are grateful for the assistance of Mitch Sogin, Susan Huse, Joseph Vineis, Andrew Voorhis, Sharon Grim, and Hilary Morrison at MBL. They thank Dr. Jennifer Biddle (University of Delaware, Lewes) for valuable insights and suggestions during the analyses and Katsunori Yanagawa (JAMSTEC, Japan) for providing detailed sequencing information on the drilling fluid assessments. They also thank Todd Sowers at the Pennsylvania State University, Department of Geosciences, for performing the methane isotope analyses presented in this study.
Publisher Copyright:
© 2016 Leah D. Brandt and Christopher H. House.
PY - 2016
Y1 - 2016
N2 - Sediments within the Okinawa back-arc basin overlay a subsurface hydrothermal network, creating intense temperature gradients with sediment depth and potential limits for microbial diversity. We investigated taxonomic changes across 45 m of recovered core with a temperature gradient of 3°C/m from the dynamic Iheya North Hydrothermal System. The interval transitions sharply from low-temperature marine mud to hydrothermally altered clay at 10 meters below seafloor (mbsf). Here, we present taxonomic results from an analysis of the 16S rRNA gene that support a conceptual model in which common marine subsurface taxa persist into the subsurface, while high temperature adapted archaeal taxa show localized peaks in abundances in the hydrothermal clay horizons. Specifically, the bacterial phylum Chloroflexi accounts for a major proportion of the total microbial community within the upper 10 mbsf, whereas high temperature archaea (Terrestrial Hot Spring Crenarchaeotic Group and methanotrophic archaea) appear in varying local abundances in deeper, hydrothermal clay horizons with higher in situ temperatures (up to 55°C, 15 mbsf). In addition, geochemical evidence suggests that methanotrophy may be occurring in various horizons. There is also relict DNA (i.e., DNA preserved after cell death) that persists in horizons where the conditions suitable for microbial communities have ceased.
AB - Sediments within the Okinawa back-arc basin overlay a subsurface hydrothermal network, creating intense temperature gradients with sediment depth and potential limits for microbial diversity. We investigated taxonomic changes across 45 m of recovered core with a temperature gradient of 3°C/m from the dynamic Iheya North Hydrothermal System. The interval transitions sharply from low-temperature marine mud to hydrothermally altered clay at 10 meters below seafloor (mbsf). Here, we present taxonomic results from an analysis of the 16S rRNA gene that support a conceptual model in which common marine subsurface taxa persist into the subsurface, while high temperature adapted archaeal taxa show localized peaks in abundances in the hydrothermal clay horizons. Specifically, the bacterial phylum Chloroflexi accounts for a major proportion of the total microbial community within the upper 10 mbsf, whereas high temperature archaea (Terrestrial Hot Spring Crenarchaeotic Group and methanotrophic archaea) appear in varying local abundances in deeper, hydrothermal clay horizons with higher in situ temperatures (up to 55°C, 15 mbsf). In addition, geochemical evidence suggests that methanotrophy may be occurring in various horizons. There is also relict DNA (i.e., DNA preserved after cell death) that persists in horizons where the conditions suitable for microbial communities have ceased.
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U2 - 10.1155/2016/2690329
DO - 10.1155/2016/2690329
M3 - Article
C2 - 28096736
AN - SCOPUS:85008929996
SN - 1472-3646
VL - 2016
JO - Archaea
JF - Archaea
M1 - 2690329
ER -