NMRexSeer

Metadata extraction and search for large scale Nuclear Magnetic Resonance (NMR) experimental data

Suppawong Tuarob, Kevin A. Glass, C. Lee Giles

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Citations (Scopus)

Abstract

Sciences have become both complex and demanding for cutting-edge technology and resources to perform experiments. Since 1997, the Environmental Molecular Sciences Laboratory (EMSL) has served as a user facility housing resources for global scientists to perform experiments necessary to their research. Overtime, the generated data has become both massive and redundant. To encourage better management and reuse of such experimental data, MyEMSL has emerged as an in-house centralized data management tool that collects and distributes data from the experiments at EMSL. Nuclear Magnetic Resonance Spectroscopy (NMR) is one of the major experiment resources that EMSL houses. We discuss NMRexSeer, a proposed digital library system that automatically extracts and indexes NMR specific metadata from NMR experimental data packages. The system also generates visualized previews and provides a search interface for easy access and discovery of desired data.

Original languageEnglish (US)
Title of host publicationICSEC 2015 - 19th International Computer Science and Engineering Conference
Subtitle of host publicationHybrid Cloud Computing: A New Approach for Big Data Era
PublisherInstitute of Electrical and Electronics Engineers Inc.
ISBN (Electronic)9781467378253
DOIs
StatePublished - Feb 8 2016
Event19th International Computer Science and Engineering Conference, ICSEC 2015 - Chiang Mai, Thailand
Duration: Nov 23 2015Nov 26 2015

Publication series

NameICSEC 2015 - 19th International Computer Science and Engineering Conference: Hybrid Cloud Computing: A New Approach for Big Data Era

Other

Other19th International Computer Science and Engineering Conference, ICSEC 2015
CountryThailand
CityChiang Mai
Period11/23/1511/26/15

Fingerprint

Metadata
Nuclear magnetic resonance
Experiments
Digital libraries
Information management
Nuclear magnetic resonance spectroscopy
Experiment
Resources

All Science Journal Classification (ASJC) codes

  • Information Systems and Management
  • Computer Networks and Communications
  • Computer Science Applications
  • Signal Processing
  • Software

Cite this

Tuarob, S., Glass, K. A., & Giles, C. L. (2016). NMRexSeer: Metadata extraction and search for large scale Nuclear Magnetic Resonance (NMR) experimental data. In ICSEC 2015 - 19th International Computer Science and Engineering Conference: Hybrid Cloud Computing: A New Approach for Big Data Era [7401396] (ICSEC 2015 - 19th International Computer Science and Engineering Conference: Hybrid Cloud Computing: A New Approach for Big Data Era). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/ICSEC.2015.7401396
Tuarob, Suppawong ; Glass, Kevin A. ; Giles, C. Lee. / NMRexSeer : Metadata extraction and search for large scale Nuclear Magnetic Resonance (NMR) experimental data. ICSEC 2015 - 19th International Computer Science and Engineering Conference: Hybrid Cloud Computing: A New Approach for Big Data Era. Institute of Electrical and Electronics Engineers Inc., 2016. (ICSEC 2015 - 19th International Computer Science and Engineering Conference: Hybrid Cloud Computing: A New Approach for Big Data Era).
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abstract = "Sciences have become both complex and demanding for cutting-edge technology and resources to perform experiments. Since 1997, the Environmental Molecular Sciences Laboratory (EMSL) has served as a user facility housing resources for global scientists to perform experiments necessary to their research. Overtime, the generated data has become both massive and redundant. To encourage better management and reuse of such experimental data, MyEMSL has emerged as an in-house centralized data management tool that collects and distributes data from the experiments at EMSL. Nuclear Magnetic Resonance Spectroscopy (NMR) is one of the major experiment resources that EMSL houses. We discuss NMRexSeer, a proposed digital library system that automatically extracts and indexes NMR specific metadata from NMR experimental data packages. The system also generates visualized previews and provides a search interface for easy access and discovery of desired data.",
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Tuarob, S, Glass, KA & Giles, CL 2016, NMRexSeer: Metadata extraction and search for large scale Nuclear Magnetic Resonance (NMR) experimental data. in ICSEC 2015 - 19th International Computer Science and Engineering Conference: Hybrid Cloud Computing: A New Approach for Big Data Era., 7401396, ICSEC 2015 - 19th International Computer Science and Engineering Conference: Hybrid Cloud Computing: A New Approach for Big Data Era, Institute of Electrical and Electronics Engineers Inc., 19th International Computer Science and Engineering Conference, ICSEC 2015, Chiang Mai, Thailand, 11/23/15. https://doi.org/10.1109/ICSEC.2015.7401396

NMRexSeer : Metadata extraction and search for large scale Nuclear Magnetic Resonance (NMR) experimental data. / Tuarob, Suppawong; Glass, Kevin A.; Giles, C. Lee.

ICSEC 2015 - 19th International Computer Science and Engineering Conference: Hybrid Cloud Computing: A New Approach for Big Data Era. Institute of Electrical and Electronics Engineers Inc., 2016. 7401396 (ICSEC 2015 - 19th International Computer Science and Engineering Conference: Hybrid Cloud Computing: A New Approach for Big Data Era).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

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N2 - Sciences have become both complex and demanding for cutting-edge technology and resources to perform experiments. Since 1997, the Environmental Molecular Sciences Laboratory (EMSL) has served as a user facility housing resources for global scientists to perform experiments necessary to their research. Overtime, the generated data has become both massive and redundant. To encourage better management and reuse of such experimental data, MyEMSL has emerged as an in-house centralized data management tool that collects and distributes data from the experiments at EMSL. Nuclear Magnetic Resonance Spectroscopy (NMR) is one of the major experiment resources that EMSL houses. We discuss NMRexSeer, a proposed digital library system that automatically extracts and indexes NMR specific metadata from NMR experimental data packages. The system also generates visualized previews and provides a search interface for easy access and discovery of desired data.

AB - Sciences have become both complex and demanding for cutting-edge technology and resources to perform experiments. Since 1997, the Environmental Molecular Sciences Laboratory (EMSL) has served as a user facility housing resources for global scientists to perform experiments necessary to their research. Overtime, the generated data has become both massive and redundant. To encourage better management and reuse of such experimental data, MyEMSL has emerged as an in-house centralized data management tool that collects and distributes data from the experiments at EMSL. Nuclear Magnetic Resonance Spectroscopy (NMR) is one of the major experiment resources that EMSL houses. We discuss NMRexSeer, a proposed digital library system that automatically extracts and indexes NMR specific metadata from NMR experimental data packages. The system also generates visualized previews and provides a search interface for easy access and discovery of desired data.

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Tuarob S, Glass KA, Giles CL. NMRexSeer: Metadata extraction and search for large scale Nuclear Magnetic Resonance (NMR) experimental data. In ICSEC 2015 - 19th International Computer Science and Engineering Conference: Hybrid Cloud Computing: A New Approach for Big Data Era. Institute of Electrical and Electronics Engineers Inc. 2016. 7401396. (ICSEC 2015 - 19th International Computer Science and Engineering Conference: Hybrid Cloud Computing: A New Approach for Big Data Era). https://doi.org/10.1109/ICSEC.2015.7401396