Sharing data between LSDBs and central repositories

Johan T.Den Dunnen, Rolf H. Sijmons, Paal S. Andersen, Mauno Vihinen, Jacques S. Beckmann, Sandro Rossetti, C. Conover Talbot, Ross Cameron Hardison, Sue Povey, Richard G.H. Cotton

Research output: Contribution to journalShort survey

15 Citations (Scopus)

Abstract

Several Locus-Specific DataBases (LSDBs) have recently been approached by larger, more general data repositories (including NCBI and UCSC) with the request to share the DNA variant data they have collected. Within the Human Genome Variation Society (HGVS) a document was generated summarizing the issues related to these requests. The document has been circulated in the HGVS/LSDB community and was discussed extensively. Here we summarize these discussions and present the concluded recommendations for LSDB data sharing with central repositories.

Original languageEnglish (US)
Pages (from-to)493-495
Number of pages3
JournalHuman mutation
Volume30
Issue number4
DOIs
StatePublished - Apr 1 2009

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Information Dissemination
Databases
Human Genome
DNA

All Science Journal Classification (ASJC) codes

  • Genetics
  • Genetics(clinical)

Cite this

Dunnen, J. T. D., Sijmons, R. H., Andersen, P. S., Vihinen, M., Beckmann, J. S., Rossetti, S., ... Cotton, R. G. H. (2009). Sharing data between LSDBs and central repositories. Human mutation, 30(4), 493-495. https://doi.org/10.1002/humu.20977
Dunnen, Johan T.Den ; Sijmons, Rolf H. ; Andersen, Paal S. ; Vihinen, Mauno ; Beckmann, Jacques S. ; Rossetti, Sandro ; Talbot, C. Conover ; Hardison, Ross Cameron ; Povey, Sue ; Cotton, Richard G.H. / Sharing data between LSDBs and central repositories. In: Human mutation. 2009 ; Vol. 30, No. 4. pp. 493-495.
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Dunnen, JTD, Sijmons, RH, Andersen, PS, Vihinen, M, Beckmann, JS, Rossetti, S, Talbot, CC, Hardison, RC, Povey, S & Cotton, RGH 2009, 'Sharing data between LSDBs and central repositories', Human mutation, vol. 30, no. 4, pp. 493-495. https://doi.org/10.1002/humu.20977

Sharing data between LSDBs and central repositories. / Dunnen, Johan T.Den; Sijmons, Rolf H.; Andersen, Paal S.; Vihinen, Mauno; Beckmann, Jacques S.; Rossetti, Sandro; Talbot, C. Conover; Hardison, Ross Cameron; Povey, Sue; Cotton, Richard G.H.

In: Human mutation, Vol. 30, No. 4, 01.04.2009, p. 493-495.

Research output: Contribution to journalShort survey

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Dunnen JTD, Sijmons RH, Andersen PS, Vihinen M, Beckmann JS, Rossetti S et al. Sharing data between LSDBs and central repositories. Human mutation. 2009 Apr 1;30(4):493-495. https://doi.org/10.1002/humu.20977