Sharing data between LSDBs and central repositories

Johan T.Den Dunnen, Rolf H. Sijmons, Paal S. Andersen, Mauno Vihinen, Jacques S. Beckmann, Sandro Rossetti, C. Conover Talbot, Ross C. Hardison, Sue Povey, Richard G.H. Cotton

Research output: Contribution to journalShort survey

15 Scopus citations

Abstract

Several Locus-Specific DataBases (LSDBs) have recently been approached by larger, more general data repositories (including NCBI and UCSC) with the request to share the DNA variant data they have collected. Within the Human Genome Variation Society (HGVS) a document was generated summarizing the issues related to these requests. The document has been circulated in the HGVS/LSDB community and was discussed extensively. Here we summarize these discussions and present the concluded recommendations for LSDB data sharing with central repositories.

Original languageEnglish (US)
Pages (from-to)493-495
Number of pages3
JournalHuman mutation
Volume30
Issue number4
DOIs
StatePublished - Apr 2009

All Science Journal Classification (ASJC) codes

  • Genetics
  • Genetics(clinical)

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    Dunnen, J. T. D., Sijmons, R. H., Andersen, P. S., Vihinen, M., Beckmann, J. S., Rossetti, S., Talbot, C. C., Hardison, R. C., Povey, S., & Cotton, R. G. H. (2009). Sharing data between LSDBs and central repositories. Human mutation, 30(4), 493-495. https://doi.org/10.1002/humu.20977