The Genetics of Seasonal Migration and Plumage Color

Kira E. Delmore, David Toews, Ryan R. Germain, Gregory L. Owens, Darren E. Irwin

Research output: Contribution to journalArticle

24 Citations (Scopus)

Abstract

Details on the genetics of behavioral and quantitative phenotypes remain limited to a few organisms. Such information is central to understanding both adaptation and speciation, as many of these phenotypes reduce gene flow between taxa [1–3]. Hybrid zones provide an ideal arena for studying this topic, as they consist of recombinant genotypes that allow genetic mapping of traits distinguishing natural populations [4]. We examined the genetic basis of migratory orientation and plumage color, both of which may contribute to speciation, in a hybrid zone between two groups of Swainson's thrushes that differ in these traits. We identified a cluster of SNPs on chromosome 4 strongly associated with migratory orientation. Genes involved with the circadian clock, nervous system, and cell signaling were located here and included candidates implicated in smaller-scale studies of migration in different animal groups, supporting previous suggestions that there is a common gene package for migration [5]. Plumage color was more polygenic than migratory orientation but showed strong associations on the Z chromosome that included SNPs linked to TYRP1, a gene involved in the production of eumelanin. We integrated these results with genomic data from pure populations and found that regions associated with both phenotypes co-localized with regions of elevated relative differentiation between the groups. This finding relates to the literature on islands of differentiation [6–8] by implicating divergent selection in generating these peaks. Together, our results identify specific genomic regions involved in both the regulation of complex phenotypes across animal groups and speciation [9].

Original languageEnglish (US)
Pages (from-to)2167-2173
Number of pages7
JournalCurrent Biology
Volume26
Issue number16
DOIs
StatePublished - Aug 22 2016

Fingerprint

migratory behavior
plumage
Color
Genes
Phenotype
phenotype
color
Chromosomes
Single Nucleotide Polymorphism
Animals
eumelanin
Z chromosome
Cell signaling
Behavioral Genetics
genomics
Chromosomes, Human, Pair 4
Circadian Clocks
Songbirds
genes
Gene Flow

All Science Journal Classification (ASJC) codes

  • Biochemistry, Genetics and Molecular Biology(all)
  • Agricultural and Biological Sciences(all)

Cite this

Delmore, K. E., Toews, D., Germain, R. R., Owens, G. L., & Irwin, D. E. (2016). The Genetics of Seasonal Migration and Plumage Color. Current Biology, 26(16), 2167-2173. https://doi.org/10.1016/j.cub.2016.06.015
Delmore, Kira E. ; Toews, David ; Germain, Ryan R. ; Owens, Gregory L. ; Irwin, Darren E. / The Genetics of Seasonal Migration and Plumage Color. In: Current Biology. 2016 ; Vol. 26, No. 16. pp. 2167-2173.
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Delmore, KE, Toews, D, Germain, RR, Owens, GL & Irwin, DE 2016, 'The Genetics of Seasonal Migration and Plumage Color', Current Biology, vol. 26, no. 16, pp. 2167-2173. https://doi.org/10.1016/j.cub.2016.06.015

The Genetics of Seasonal Migration and Plumage Color. / Delmore, Kira E.; Toews, David; Germain, Ryan R.; Owens, Gregory L.; Irwin, Darren E.

In: Current Biology, Vol. 26, No. 16, 22.08.2016, p. 2167-2173.

Research output: Contribution to journalArticle

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Delmore KE, Toews D, Germain RR, Owens GL, Irwin DE. The Genetics of Seasonal Migration and Plumage Color. Current Biology. 2016 Aug 22;26(16):2167-2173. https://doi.org/10.1016/j.cub.2016.06.015